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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012807 ID=TCONS_00012807|Name=TCONS_00012807|organism=Clytia hemisphaerica|type=transcript|length=710bp
GTGATGAGTGCACGGtgtatgacgtcataaacaaaTTGTGTCAGGAATTA
CGTTAAACAGGGCAACATCATTGTTTTGTTTCGAAAATGGTGGCAGATAC
CACTGTATAAAAACTGCCATCAGCAAGTGAACATATAGTTGACTCTAGCT
AATCTAAAATTTGGTGGTCGATCTAGTTTCGACATACAGAGAGGTTTAAA
TCACAGAAAATCCATCAAGGCCATGACAAagaattcttttgaatttgTGG
AAGGGATCGAATGCCAACTCTGGTTTCTTTCGGATCTTTCGCAGACTACA
TTAGCGAATATAGAGCTACTTTTTTTTGAAACGATTCGGAACAACCCGCC
GCTGTTTTAACGTGTGCGCGATTGAGTCGGAGAGTTATAGTGCTGATTTA
CTGTCGTCCTCAATCATTTAGGATCTAGACGAATCCAAAGCTAGCCGTCT
CCGCCACAGGACAAACTCCATACATAAAGTCGTTaccgATTGTGGATGTT
TCAAAGGATAGGAAGTGTTCCAACTCCTTCCTGCACTTCCGTCATTCGAG
ATGTTGAACAGCACAAGTACAACTTTTGAACTTCTGGTTCAATGATGGTC
GTTTCCAGTGGTGTATTCGCAGAACTTGCTTCGTGGACACACTACGTGGT
CACTTTCTCTCGTCTGGGAAGGCCATGTCTCGTCAACGAGAGCCTATGCT
GCTGttcttt Run BLAST on NCBI transcript from alignment at sc0000156:509748..510633+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012807 ID=TCONS_00012807|Name=TCONS_00012807|organism=Clytia hemisphaerica|type=transcript|length=886bp|location=Sequence derived from alignment at sc0000156:509748..510633+ (Clytia hemisphaerica)
GTGATGAGTGCACGGtgtatgacgtcataaacaaaTTGTGTCAGGAATTA
CGTTAAACAGGGCAACATCATTGTTTTGTTTCGAAAATGGTGGCAGATAC
CACTGTATAAAAACTGCCATCAGCAAGTGAACATATAGTTGACTCTAGCT
AATCTAAAATTTGGTGGTCGATCTAGTTTCGACATACAGAGAGGTTTAAA
TCACAGAAAATCCATCAAGGCCATGACAAagaattcttttgaatttgTGG
AAGGGATCGAATGCCAACTCTGGTTTCTTTCGGATCTTTCGCAGACTACA
TTAGCGAATATAGAGCTACTTTTTTTTGAAACGATTCGGAACAACCCGCC
GCTGTTTTAACGTGTGCGCGATTGAGTCGGAGAGTTATAGTGCTGATTTA
CTGTCGTCCTCAATCATTTAGGATCTAGACGAATCCAAAGCTAGCCGTCT
CCGCCACAGGACAAACTCCATACATAAAGTCGTTaccggtaaggttctaa
ttggACTATATCCTGACCAATTGTGGACGACATTTTAGGGGTTAGAAGTG
CGAATTATTTTccaaatacataaacttgccACTATTAATGTGACGCAGAG
GTAAACACATGTACGACTCATTCATCTTGAGTTTTCACGCTAAAATATCT
TCATCTTTTCACAGATTGTGGATGTTTCAAAGGATAGGAAGTGTTCCAAC
TCCTTCCTGCACTTCCGTCATTCGAGATGTTGAACAGCACAAGTACAACT
TTTGAACTTCTGGTTCAATGATGGTCGTTTCCAGTGGTGTATTCGCAGAA
CTTGCTTCGTGGACACACTACGTGGTCACTTTCTCTCGTCTGGGAAGGCC
ATGTCTCGTCAACGAGAGCCTATGCTGCTGttcttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012807-exon-sc0000156-1491911889:509748..510235 | TCONS_00012807-exon-sc0000156-1491911889:509748..510235 | Clytia hemisphaerica | exon |
| TCONS_00012807-exon-sc0000156-1510915933:509748..510235 | TCONS_00012807-exon-sc0000156-1510915933:509748..510235 | Clytia hemisphaerica | exon |
| TCONS_00012807-exon-sc0000156-1575043694:509748..510235 | TCONS_00012807-exon-sc0000156-1575043694:509748..510235 | Clytia hemisphaerica | exon |
| TCONS_00012807-exon-sc0000156-1491911889:510412..510633 | TCONS_00012807-exon-sc0000156-1491911889:510412..510633 | Clytia hemisphaerica | exon |
| TCONS_00012807-exon-sc0000156-1510915933:510412..510633 | TCONS_00012807-exon-sc0000156-1510915933:510412..510633 | Clytia hemisphaerica | exon |
| TCONS_00012807-exon-sc0000156-1575043694:510412..510633 | TCONS_00012807-exon-sc0000156-1575043694:510412..510633 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000156 | supercontig | sc0000156:509748..510633 + |
Blast
The following BLAST results are available for this feature:
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