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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012674 ID=TCONS_00012674|Name=TCONS_00012674|organism=Clytia hemisphaerica|type=transcript|length=1085bp
cagaagaaaaaaaagattttgccaTATGATTTTGAAGAGGGAAGTCTAGC
GAGCCcttagattttttccttgtatgtTTGTTTATGTTAGTTCAGTCATC
ATAAAAATGTAGATTATTGAGATGTTATCTTGTTCATATTATGTTTATTT
TAATGGTTTTTCTCGTTATGTTATCATAGTATTTACATGACTTCTGGCTC
TTATAGTACACTAAAGTACTAATGTTGAATGGATGGACATGTTCtcattt
ttagttttatctTGTCAACGTTCGAAAAGTGTAAACAGCTATTGATTGAT
CCAATCAATTATTGATTGCTTATTGTTGCTACATTTTGTCTTGCTTTTCG
AGGAAATTATGACAAAATGATTGCTCTACTATTATGACATAATGATTATA
AACCTTAATAAGTTCATCAGAACTCACTGACGGGCATGCTGTTATTGTAG
TCAAAGTGATAAAGATCGTTGACTTCCATTCACTCACCACTTAtttatct
tctttcttcttgCATTCTTGTCTGAAATATGGTATGTACTGTCAAGATGT
GCAGAATGCTCTTAATTCTCGAAGTATATCCTGCTTGGACTTAAAAATGC
CTTATTTGGAAAAAAGAAACGTGTCTTTCGAAAAGCTGATCATAATAGTT
TTCACTATCCTATGTTGTGGTTTGCACATTAAATTCTTCTTCGAAGTTTA
TGGTCTATGCTCACTAATCGGCCCTTACTTTGAAATCATTTCGTTCAGCG
TATTCTTACTTGGATTTGCTTGTCACAAAACACACAATATCTGGCTTTAA
AAGGTCGAATTCCTTTGACATCGTAACTGCTTGTGTCATTATGTTAGACT
GTGTTTTATTCATGAGGAATTTCTTAAATTATTGACCTTTGATTTGTAGT
AATTGTCAGTCTCAATTTGCATGACGTTCTTGTGACTTTCCGTGCGTGAT
GACAATTCGTTTTGGCTTTCTGTTTATATGAAGAGGAAGTACATGTGTTA
GACAGGAAATTTCGGAACTTCTATTCgacgtatttcttttaaataagaTG
GTGGTTTTTATGAAGagcattttttgtgttttgat Run BLAST on NCBI transcript from alignment at sc0000146:459046..460130 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012674 ID=TCONS_00012674|Name=TCONS_00012674|organism=Clytia hemisphaerica|type=transcript|length=1085bp|location=Sequence derived from alignment at sc0000146:459046..460130 (Clytia hemisphaerica)
atcaaaacacaaaaaatgctCTTCATAAAAACCACCAtcttatttaaaag
aaatacgtcGAATAGAAGTTCCGAAATTTCCTGTCTAACACATGTACTTC
CTCTTCATATAAACAGAAAGCCAAAACGAATTGTCATCACGCACGGAAAG
TCACAAGAACGTCATGCAAATTGAGACTGACAATTACTACAAATCAAAGG
TCAATAATTTAAGAAATTCCTCATGAATAAAACACAGTCTAACATAATGA
CACAAGCAGTTACGATGTCAAAGGAATTCGACCTTTTAAAGCCAGATATT
GTGTGTTTTGTGACAAGCAAATCCAAGTAAGAATACGCTGAACGAAATGA
TTTCAAAGTAAGGGCCGATTAGTGAGCATAGACCATAAACTTCGAAGAAG
AATTTAATGTGCAAACCACAACATAGGATAGTGAAAACTATTATGATCAG
CTTTTCGAAAGACACGTTTCTTTTTTCCAAATAAGGCATTTTTAAGTCCA
AGCAGGATATACTTCGAGAATTAAGAGCATTCTGCACATCTTGACAGTAC
ATACCATATTTCAGACAAGAATGcaagaagaaagaagataaaTAAGTGGT
GAGTGAATGGAAGTCAACGATCTTTATCACTTTGACTACAATAACAGCAT
GCCCGTCAGTGAGTTCTGATGAACTTATTAAGGTTTATAATCATTATGTC
ATAATAGTAGAGCAATCATTTTGTCATAATTTCCTCGAAAAGCAAGACAA
AATGTAGCAACAATAAGCAATCAATAATTGATTGGATCAATCAATAGCTG
TTTACACTTTTCGAACGTTGACAagataaaactaaaaatgaGAACATGTC
CATCCATTCAACATTAGTACTTTAGTGTACTATAAGAGCCAGAAGTCATG
TAAATACTATGATAACATAACGAGAAAAACCATTAAAATAAACATAATAT
GAACAAGATAACATCTCAATAATCTACATTTTTATGATGACTGAACTAAC
ATAAACAAacatacaaggaaaaaatctaagGGCTCGCTAGACTTCCCTCT
TCAAAATCATAtggcaaaatcttttttttcttctg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012674-exon-sc0000146-1491911889:459046..460130 | TCONS_00012674-exon-sc0000146-1491911889:459046..460130 | Clytia hemisphaerica | exon |
| TCONS_00012674-exon-sc0000146-1510915933:459046..460130 | TCONS_00012674-exon-sc0000146-1510915933:459046..460130 | Clytia hemisphaerica | exon |
| TCONS_00012674-exon-sc0000146-1575043694:459046..460130 | TCONS_00012674-exon-sc0000146-1575043694:459046..460130 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000146 | supercontig | sc0000146:459046..460130 . |
Blast
The following BLAST results are available for this feature:
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