TCONS_00012300 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012300
Unique NameTCONS_00012300
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1817

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012300 ID=TCONS_00012300|Name=TCONS_00012300|organism=Clytia hemisphaerica|type=transcript|length=1817bp
ATTATAAACACAAAGCAAAACGCGACTCAAAAGAAACCTCAATTTAAAAT
CTATCGAGAAATTGCAATACAAGTTGCAATACTACAACCTGTATTTAGGG
AagtagaaaaatatttcagtcaAGGAACGCTCTGTAAGAAGGCATTAGGA
AGATGAACCTTCGCCTATTGATTTTGGTGGGACTTGCGTTCACTCAAGGC
AAGGATTTGTTTGACTTGGACGGTGTTGACGAACTTTTTCCTCATGATGA
AAAAGTAGAGGGCGGTGGGGATGAAATATTTCTCCACGATGAAAAAACGC
CACAACCACAATGGCCGCCCATAAGCTTCAACAGATGCtcaccacagata
tctaagcccgaagggctagatttgcaacNCCAACAGATGCTCACAATCAA
CTAAACTTAAAGTCATGTACGGAATCTTGCATTTTGAAACATCTCTCAAA
AAGAAACCGATGACATCATTTGAAATTGATATTGAATGGAACGCTCTGGA
ATTTCATCTGACTGAAAATACGAAGAAACATGGAGGAGTTTATATAGCGT
ACACTTTCGGTATGAAAAACGGACCCGGAGGATATTTTGGAATACAAATT
CATGCTGATGGAGgCCAATTCATTTTCTCCGTCTGGGATGCAGATCGGAC
AAACAAAGCAGACGGTATCAAACACGTTAAAAAGTCATCAAAACTAGCAT
GGCCGATGGATACGGAAAATTGTAAACGGAATTGCCAAGATTGTGGTGTA
CCCTACTTAAAAGAGATTGGTAAAAAAGGTTTCACTACTGGTACAAAGTG
CACCAAAAACCATCCATCGATGAAGGCTGGTGATCGATACAAGGTCAAAT
TGGAGTGTGTACCAGATCAAGATACTATCAACACCGCTGATttcgaaggt
ttcaaaaaagtCCATCAAGACGTTTTGGGAGAAGTTGATCGTGACGTCAC
AGGATCTGCATGGGAAGTCAAAGTTATTGTCGTAAAAGGTGAAAACCAAG
GTTCCGAAATCCCAATCGGAACAATCATGTTCGAATCGGCTGAAATCGGA
TTCAACCGTCTTGGGACATTTGACGAAATGATTGGCTGTAACAAATGTAA
CGCTATCTATCACAAGGACACTCGATATGGACCCAAGATCGGCGGGGACG
ACAGAAGTGTCCGTAAACCTACAAAGATGTATGGCGACACGAAATATTAC
AAATCTTCTTGCAAAAAGTATTTTATTTCTGGCTCAAAAGATGAGACGAG
TATCTCATTTGAGAGTGGCCCTCTAACTGAAGGAGTTACAAAGACCAAAA
CACAAATTTGGTAACTGTTGTATACAACATATAGATTACATCGGTTTGTA
TATTTGCAAGTATAGTTGACTTTTAAGAGCCTTAATAAAAATCTTAACTG
AAAATCTTGCGAGTTGTATATTTAAGAGCTTATTTTACCTTTTTCTTGAA
CACTTAACCTTAACATTTTCGTGTTCAATACAAAGCACGTAATTTTTTCA
TATTGTAATTGGATAGgaccattttattttatatccatacagggcttGGA
CGATTTCCACGAGGTAATCCGAAGAAGTATTTCCAGGGGTCTAAGGAAAG
TCTTTTCAATTTCCAAGGGGGTTAAAAATTAGTCTAAAACTTCCTGAGTG
TTATCAGTGCCGTAGACACAAATAATATTTTAGAGGGGCCCTATAAGTTT
AGTATCTAAGGAGGcaaggaggccccaccatggcTGGGGCAGACGGGCCA
GAAAAAGTTTTGAACTTCATGCCCTCCAGATTGGCTAAAACTGCCTCTCC
GAAAGTCAACTTTTAGC
Run BLAST on NCBI

protein sequence of TCONS_00012300-protein

>TCONS_00012300-protein ID=TCONS_00012300-protein|Name=TCONS_00012300-protein|organism=Clytia hemisphaerica|type=polypeptide|length=299bp
MYGILHFETSLKKKPMTSFEIDIEWNALEFHLTENTKKHGGVYIAYTFGM
KNGPGGYFGIQIHADGGQFIFSVWDADRTNKADGIKHVKKSSKLAWPMDT
ENCKRNCQDCGVPYLKEIGKKGFTTGTKCTKNHPSMKAGDRYKVKLECVP
DQDTINTADFEGFKKVHQDVLGEVDRDVTGSAWEVKVIVVKGENQGSEIP
IGTIMFESAEIGFNRLGTFDEMIGCNKCNAIYHKDTRYGPKIGGDDRSVR
KPTKMYGDTKYYKSSCKKYFISGSKDETSISFESGPLTEGVTKTKTQIW
Run BLAST on NCBI

transcript from alignment at sc0000143:531341..537736+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012300 ID=TCONS_00012300|Name=TCONS_00012300|organism=Clytia hemisphaerica|type=transcript|length=6396bp|location=Sequence derived from alignment at sc0000143:531341..537736+ (Clytia hemisphaerica)
ATTATAAACACAAAGCAAAACGCGACTCAAAAGAAACCTCAATTTAAAAT CTATCGAGAAATTGCAATACAAGTTGCAATACTACAACCTGTATTTAGGG AagtagaaaaatatttcagtcaAGGAACGCTCTGTAAGAAGGCATTAGGA AGATGAACCTTCGCCTATTGATTTTGGTGGGACTTGCGTTCACTCAAGGT AAGGTCTCCAATGAAATAAATCATCACTTcgtttttgttgtttgttgtat CGTTTGATCATAGTATACTATGGTTTTATCGATAGTTACAGGCTCAACAT CGTGGCCTTTCATTTGCATGTCACTGTGTCCACACTTTGTTATATATCCG TTTTTGACGAAGTAACGCTTGGCCAATTCATGGCCATCCAATGGAAGAAA CGGCGCCTTGTAAAAATCGCTTGTATTTCATAACGCTTCGGCTTTGTACT AGCGAGGCTAAGCAAGTGTTCATTTAGACTGTTCAATGCGAtatcgtagg cctgtacataagatttcatatgcatggtttgctttggcaagttatgtaca ggcctacggtatcgcactttacggtcaaaataaacccgtgcttaacctcg ctactATTTTAAAGTCTATCGATAAATCATATACGGATTGTCAAGAGAAA GTTTTATTCATATCGTGGTCAATTTATATTAATTCAGGATATTTCTAACA CGTGCATATTTTCGATGTCAAGCTAGAAAAAATGACAAGCAGTTTTTGCA GTTTCTGAAGGTGTATTTTTTTGGTTTATCCCAGATAAGATATAACATCA ACATAAATAGTGTAGTAATAGaggataaaaagaaaaaccttcTAATTTGA GCTGTTGTTTCTCTTACCCAAGCTTTACTTTTTTGGGCTATCTATTAATT TAATCTTTCGATCCTCTCCAATTGTGGTACCCGGGAGGGAATTTTCCTGT TGTGGTATCTGTCCACAGATTTTGAAGCCTTTTgatgtcataacttttcg agaTCTAGGCCCATAAGtgtgtttttgaaactttcttaTTTCACCGCATT ATGTGATTatttttagattccaaaaagccttaaattgttcttaatagtAG GGGGTCAAGCCTTTTGTGTTTGAGTCAGAGAGTTgctgtaatacattttt tactcagaatttcatgctatttcagatggtaccaattattttcgtttatt ttgacttttgaaaatcagctacTTTCCTACCCCTCATTGTCCCTTGCAGT TTTagctatggcgtcactattttggtcataaaacgttttcccgggcctaa tccacGTCCTctctctcaaaaatatcttataaTATACTGCTCTTTGGAAT AGGCTAAAAATTgctaggtcgtaaaaaagataAGGGACCCAAGGCTTGGC CCCTACGATAacgtgtttttaaaatttatgttattatatatagtttgctc ttattaAAAACTGTGTTGAAAATTTCTCATAAACAGGCAAGGATTTGTTT GACTTGGACGGTGTTGACGAACTTTTTCCTCATGATGAAAAAGTAGAGGG CGGTGGGGATGAAATATTTCTCCACGATGAAAAAACGCCACAACCACAAT GGCCGCCCATAAGCTTCAACAGATGCtcaccacagatatctaagcccgaa gggctagatttgcaactttaagctttctccagcaaaaaaaagtgaagcta aaatttgactttttaaatttcgtgccgaNATGTCAAGCTAGAAAAAATGA CAAGCAGTTTTTGCAGTTTCTGAAGGTGTATTTTTTTGGTTTATCCCAGA TAAGATATAACATCAACATAAATAGTGTAGTAATAGaggataaaaagaaa aaccttcTAATTTGAGCTGTTGTTTCTCTTACCCAAGCTTTACTTTTTTG GGCTATCTATTAATTTAATCTTTCGATCCTCTCCAATTGTGGTACCCGGG AGGGAATTTTCCTGTTGTGGTATCTGTCCACAGATTTTGAAGCCTTTTga tgtcataacttttcgagaTCTAGGCCCATAAGtgtgtttttgaaactttc ttaTTTCACCGCATTATGTGATTatttttagattccaaaaagccttaaat tgttcttaatagtagggggccaagcctttTGTGTTTGAGTCAGAGAGTTc ctgtaatacattttttactcagaatttcatgctatttcagatggtaccaa tcattttcgtttattttgacttttgaaaatcagctacTTTCCTACCCCTC ATTGTCCCTTGTAGTTTTagctatggcgtcactattttggtcataaaacg ttttcccgggcctaatccgcgtcctctctctcaaaaatatcttataaTAT ACTGCTCTTTGGAATAGGCTAAAAATTgctaggtcgtaaaaaagataagg gaccccaggcttggcccctaCGATaatgtgtttttaaaatttatgttatt atatatagtttgctcttattaAAAACTGTGTTGAAAATTTCTCATAAACA GGCAAGGATTTGTTTGACTTGGACGGTGTTGACGAACTTTTTCCTCATGA TGAAAAAGTAGAGGGCGGTGGGGATGAAATATTTCTCCACGATGAAAAAA CGCCACAACCACAATGGCCGCCCATAAGCTTCAACAGATGCtcaccacag atatctaagcccgaagggctagatttgcaacNCCAACAGATGCTCACAAT CAACTAAACTTAAAGTCATGTACGGAATCTTGCATTTTGAAACATCTCTC AAAAAGAAACCGATGACATCATTTGAAATTGATATTGAATGGAACGCTCT GGAATTTCATCTGACTGAAAATACGAAGAAACATGGAGGAGTTTATATAG CGTACACTTTCGGTATGAAAAACGGACCCGGAGGATATTTTGGAATACAA ATTCATGCTGATGGAGGTTTGTTTGAGTTGTTTGTGATCTAACTCATACA GTTGTTATTCTCTAATACGACGTCCTATTATTCGATACACTCCTATCCTa tgatattgaaagtcaccgtcaacaagaaactctaataaacgacgctctac tattcgatacgctcNaaagtcaccgtcaacaagaaactctaataaacgac gctctactattcaatACGCTCCCCATTTTGATAAAGATCCAAGCCCCCCT TGAAAATCGGATTATGGACAGTCAACTGTATTGTCAATGGTGTAAATCAA TGTGGAACCTTTTCCCACTAGGACGATTAGCCCAAAATAGTCATTCTCGG TGAAATAAACTATTCTGTATTTTACATAATCGAATTCAGAAATCAAACTA ATTGAAAGGAAGTTGAAGTATTTTCGAAAACTAACAGCTAAAATGGCttc acatttttgaaaaaatacgaTTGCTTATGTTTAATGCAATTAAAATCAAT ATAACACCAGTCACCTACCAGTTTAATGGTATTTCCAGAGAAAAGCCCTT GGAAATTACAAAAGATTTTCTCACAACACTTTTGACCCATCAACCAATGA GCTTCATTTAGACCCTGGGAAGCAGTTTCTCAATACCGGACAAGCAAGAT attttgatcgaagtttttttgaaagtggtacccgaaTCGAGAGCGATCTA CTTGTGCAGTAaagatgtagcgccgtttgtcgttaggcaagATTTTAAAA CTATAATGTCTTCATTGTGGGTACCCCTCtcaaaaaacgatcaaaaatGG CGGATAAGGCTTGGTCTAGGTTTTATTAAGGTCAGTGCCATCAACcccaa aatgttttaattttaggCCAATTCATTTTCTCCGTCTGGGATGCAGATCG GACAAACAAAGCAGACGGTATCAAACACGTTAAAAAGTCATCAAAACTAG CATGGCCGATGGATACGGAAAATTGTAAACGGAATTGCCAAGATTGTGGT GTACCCTACTTAAAAGAGATTGGTAAAAAAGGTTTCACTACTGGTACAAA GTGCACCAAAAACCATCCATCGATGAAGGTAAcacctttttgtatttttc cgtACACCCTTTTCTCAAAGACCcgttagaattttttcagccaacCATAA CGAACGGAAGGTCTGTGATATTCCCATGGTTTCATGgttggggatttaaa ttccattgttttcaagtcagaaaatttagtggagataattcattattttc agtgggTACACAATCTGGAGtagaattttccactggggacgatattttgg gcaatttttcccgtgggaaggggtcccagtgggtctgtgagaagggggtg tttcgaTCTAGAGTGATAGTCAAGTGGTGAAAGGCGTCAGTCTCTCAAGC CAGAATTTCGCTCCTTGAATTCCCGCTCCTTCTAATGTGCCATTCAATAG AGTAATGTATAGggataaaaatagaaagttaTGTAGAGTGCGAGAATGTG aaaaatatgtcgttctttgtcgttctttttatcatttgtcgttctttttt tcgttttttaatagttattgtcgttctttttgatggtctggaaacgttag atgaacagtctcacATTTCTCGAAAGCGTGCTTCGAGAATAGTAACTGCT ATAGGTTTGGTTTATCAACATGAAACATTAAACCTTTTAGGAGAGGGATC GTAAATCTAAGTCTTTGGGGTTTACAGATGTAGTCTACAGCCCACCAAGA TACAGTCATTATTTATTCACACCAATACCCTCATTAGGCTGGTGATCGAT ACAAGGTCAAATTGGAGTGTGTACCAGATCAAGATACTATCAACACCGCT GATttcgaaggtttcaaaaaagtCCATCAAGACGTTTTGGGAGAAGTTGA TCGTGACGTCACAGGTAAAAtaaaactgaaatattttctCGAAAATACTA TCAGTTAATACTGATAGAAAGCCAATCCTATGCTCCTAAAATAGCTCCCT CCCTTATTAAATCTTGCAGTATATACCAGTCTAAATATGATTCCCCCGAG GCAGCAGATCGGACAGAATTTACCTACCCTAAATTGACGTGAAAGTTGGT ACGTTTTGAAGAAGTGTCCAAAACAGGTCGGAAATGCAATATTAGCATAT TTATAACATACGTACTTACTAATCATACATTATTTTAACCAAAGTAAATA TTAATGAGAATATCAATTAGGGGGAATTGTAGGCTGCAAGCAAcctctct gatatgttttgatattggGGATGCTAATCGTGTATAAAATCCCCTTCCGA ACAGTAACCCAAATTTTGGGTAACCTGTTTCAACTTTCTTAAAATTGTTG AGAAACCCAATGATTATATTAACATCTAGtcattccaatttttaattcaa atttaatgaaatttaaatatatttcaTATAAGACTTACAAGTCAAGCTTA TGAAGAAactcaaaaaaacaaagacgggggtaactctcggacgggaattt tatacacgaaacgcatcccctatatcaaaccATATCAGGGGGATACTTAC AGTCTAGGGAATCTAGGGAGCAGACTAGGAATAAATATAACAAATCTTTA AACAGTTAAATCAAGAAAATTGTTCCTATAGGATCTGCATGGGAAGTCAA AGTTATTGTCGTAAAAGGTGAAAACCAAGGTTCCGAAATCCCAATCGGAA CAATCATGTTCGAATCGGCTGAAATCGGATTCAACCGTCTTGGGACATTT GACGAAATGATTGGCTGTAACAAATGTAACGCTATCTATCACAAGGACAC TCGATATGGACCCAAGATCGGCGGGGACGACAGAAGTGTCCGTAAACCTA CAAAGATGTATGGCGACACGAAATATTACAAATCTTCTTGCAAAAAGTAT TTTATTTCTGGCTCAAAAGATGAGACGAGTATCTCATTTGAGAGTGGCCC TCTAACTGAAGGAGTTACAAAGACCAAAACACAAATTTGGTAACTGTTGT ATACAACATATAGATTACATCGGTTTGTATATTTGCAAGTATAGTTGACT TTTAAGAGCCTTAATAAAAATCTTAACTGAAAATCTTGCGAGTTGTATAT TTAAGAGCTTATTTTACCTTTTTCTTGAACACTTAACCTTAACATTTTCG TGTTCAATACAAAGCACGTAATTTTTTCATATTGTAATTGGATAGgacca ttttattttatatccatacagggcttGGACGATTTCCACGAGGTAATCCG AAGAAGTATTTCCAGGGGTCTAAGGAAAGTCTTTTCAATTTCCAAGGGGG TTAAAAATTAGTCTAAAACTTCCTGAGTGTTATCAGTGCCGTAGACACAA ATAATATTTTAGAGGGGCCCTATAAGTTTAGTATCTAAGGAGGcaaggag gccccaccatggcTGGGGCAGACGGGCCAGAAAAAGTTTTGAACTTCATG CCCTCCAGATTGGCTAAAACTGCCTCTCCGAAAGTCAACTTTTAGC

Coding sequence (CDS) from alignment at sc0000143:531341..537736+

>TCONS_00012300 ID=TCONS_00012300|Name=TCONS_00012300|organism=Clytia hemisphaerica|type=CDS|length=3600bp|location=Sequence derived from alignment at sc0000143:531341..537736+ (Clytia hemisphaerica)
ATGTACGGAATCTTGCATTTTGAAACATCTCTCAAAAAGAAACCGATGAC
ATCATTTGAAATTGATATTGAATGGAACGCTCTGGAATTTCATCTGACTG
AAAATACGAAGAAACATGGAGGAGTTTATATAGCGTACACTTTCGGTATG
AAAAACGGACCCGGAGGATATTTTGGAATACAAATTCATGCTGATGGAGg
CCAATTCATTTTCTCCGTCTGGGATGCAGATCGGACAAACAAAGCAGACG
GTATCAAACACGTTAAAAAGTCATCAAAACTAGCATGGCCGATGGATACG
GAAAATTGTAAACGGAATTGCCAAGATTGTGGTGTACCCTACTTAAAAGA
GATTGGTAAAAAAGGTTTCACTACTGGTACAAAGTGCACCAAAAACCATC
CATCGATGAAGGCTGGTGATCGATACAAGGTCAAATTGGAGTGTGTACCA
GATCAAGATACTATCAACACCGCTGATttcgaaggtttcaaaaaagtCCA
TCAAGACGTTTTGGGAGAAGTTGATCGTGACGTCACAGGATCTGCATGGG
AAGTCAAAGTTATTGTCGTAAAAGGTGAAAACCAAGGTTCCGAAATCCCA
ATCGGAACAATCATGTTCGAATCGGCTGAAATCGGATTCAACCGTCTTGG
GACATTTGACGAAATGATTGGCTGTAACAAATGTAACGCTATCTATCACA
AGGACACTCGATATGGACCCAAGATCGGCGGGGACGACAGAAGTGTCCGT
AAACCTACAAAGATGTATGGCGACACGAAATATTACAAATCTTCTTGCAA
AAAGTATTTTATTTCTGGCTCAAAAGATGAGACGAGTATCTCATTTGAGA
GTGGCCCTCTAACTGAAGGAGTTACAAAGACCAAAACACAAATTTGGTAA
ATGTACGGAATCTTGCATTTTGAAACATCTCTCAAAAAGAAACCGATGAC
ATCATTTGAAATTGATATTGAATGGAACGCTCTGGAATTTCATCTGACTG
AAAATACGAAGAAACATGGAGGAGTTTATATAGCGTACACTTTCGGTATG
AAAAACGGACCCGGAGGATATTTTGGAATACAAATTCATGCTGATGGAGg
CCAATTCATTTTCTCCGTCTGGGATGCAGATCGGACAAACAAAGCAGACG
GTATCAAACACGTTAAAAAGTCATCAAAACTAGCATGGCCGATGGATACG
GAAAATTGTAAACGGAATTGCCAAGATTGTGGTGTACCCTACTTAAAAGA
GATTGGTAAAAAAGGTTTCACTACTGGTACAAAGTGCACCAAAAACCATC
CATCGATGAAGGCTGGTGATCGATACAAGGTCAAATTGGAGTGTGTACCA
GATCAAGATACTATCAACACCGCTGATttcgaaggtttcaaaaaagtCCA
TCAAGACGTTTTGGGAGAAGTTGATCGTGACGTCACAGGATCTGCATGGG
AAGTCAAAGTTATTGTCGTAAAAGGTGAAAACCAAGGTTCCGAAATCCCA
ATCGGAACAATCATGTTCGAATCGGCTGAAATCGGATTCAACCGTCTTGG
GACATTTGACGAAATGATTGGCTGTAACAAATGTAACGCTATCTATCACA
AGGACACTCGATATGGACCCAAGATCGGCGGGGACGACAGAAGTGTCCGT
AAACCTACAAAGATGTATGGCGACACGAAATATTACAAATCTTCTTGCAA
AAAGTATTTTATTTCTGGCTCAAAAGATGAGACGAGTATCTCATTTGAGA
GTGGCCCTCTAACTGAAGGAGTTACAAAGACCAAAACACAAATTTGGTAA
ATGTACGGAATCTTGCATTTTGAAACATCTCTCAAAAAGAAACCGATGAC
ATCATTTGAAATTGATATTGAATGGAACGCTCTGGAATTTCATCTGACTG
AAAATACGAAGAAACATGGAGGAGTTTATATAGCGTACACTTTCGGTATG
AAAAACGGACCCGGAGGATATTTTGGAATACAAATTCATGCTGATGGAGg
CCAATTCATTTTCTCCGTCTGGGATGCAGATCGGACAAACAAAGCAGACG
GTATCAAACACGTTAAAAAGTCATCAAAACTAGCATGGCCGATGGATACG
GAAAATTGTAAACGGAATTGCCAAGATTGTGGTGTACCCTACTTAAAAGA
GATTGGTAAAAAAGGTTTCACTACTGGTACAAAGTGCACCAAAAACCATC
CATCGATGAAGGCTGGTGATCGATACAAGGTCAAATTGGAGTGTGTACCA
GATCAAGATACTATCAACACCGCTGATttcgaaggtttcaaaaaagtCCA
TCAAGACGTTTTGGGAGAAGTTGATCGTGACGTCACAGGATCTGCATGGG
AAGTCAAAGTTATTGTCGTAAAAGGTGAAAACCAAGGTTCCGAAATCCCA
ATCGGAACAATCATGTTCGAATCGGCTGAAATCGGATTCAACCGTCTTGG
GACATTTGACGAAATGATTGGCTGTAACAAATGTAACGCTATCTATCACA
AGGACACTCGATATGGACCCAAGATCGGCGGGGACGACAGAAGTGTCCGT
AAACCTACAAAGATGTATGGCGACACGAAATATTACAAATCTTCTTGCAA
AAAGTATTTTATTTCTGGCTCAAAAGATGAGACGAGTATCTCATTTGAGA
GTGGCCCTCTAACTGAAGGAGTTACAAAGACCAAAACACAAATTTGGTAA
ATGTACGGAATCTTGCATTTTGAAACATCTCTCAAAAAGAAACCGATGAC
ATCATTTGAAATTGATATTGAATGGAACGCTCTGGAATTTCATCTGACTG
AAAATACGAAGAAACATGGAGGAGTTTATATAGCGTACACTTTCGGTATG
AAAAACGGACCCGGAGGATATTTTGGAATACAAATTCATGCTGATGGAGg
CCAATTCATTTTCTCCGTCTGGGATGCAGATCGGACAAACAAAGCAGACG
GTATCAAACACGTTAAAAAGTCATCAAAACTAGCATGGCCGATGGATACG
GAAAATTGTAAACGGAATTGCCAAGATTGTGGTGTACCCTACTTAAAAGA
GATTGGTAAAAAAGGTTTCACTACTGGTACAAAGTGCACCAAAAACCATC
CATCGATGAAGGCTGGTGATCGATACAAGGTCAAATTGGAGTGTGTACCA
GATCAAGATACTATCAACACCGCTGATttcgaaggtttcaaaaaagtCCA
TCAAGACGTTTTGGGAGAAGTTGATCGTGACGTCACAGGATCTGCATGGG
AAGTCAAAGTTATTGTCGTAAAAGGTGAAAACCAAGGTTCCGAAATCCCA
ATCGGAACAATCATGTTCGAATCGGCTGAAATCGGATTCAACCGTCTTGG
GACATTTGACGAAATGATTGGCTGTAACAAATGTAACGCTATCTATCACA
AGGACACTCGATATGGACCCAAGATCGGCGGGGACGACAGAAGTGTCCGT
AAACCTACAAAGATGTATGGCGACACGAAATATTACAAATCTTCTTGCAA
AAAGTATTTTATTTCTGGCTCAAAAGATGAGACGAGTATCTCATTTGAGA
GTGGCCCTCTAACTGAAGGAGTTACAAAGACCAAAACACAAATTTGGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006919XLOC_006919Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012300-exon-sc0000143-1491911889:531341..531538TCONS_00012300-exon-sc0000143-1491911889:531341..531538Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1510915933:531341..531538TCONS_00012300-exon-sc0000143-1510915933:531341..531538Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1575043694:531341..531538TCONS_00012300-exon-sc0000143-1575043694:531341..531538Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1491911889:533842..534256TCONS_00012300-exon-sc0000143-1491911889:533842..534256Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1510915933:533842..534256TCONS_00012300-exon-sc0000143-1510915933:533842..534256Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1575043694:533842..534256TCONS_00012300-exon-sc0000143-1575043694:533842..534256Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1491911889:535107..535318TCONS_00012300-exon-sc0000143-1491911889:535107..535318Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1510915933:535107..535318TCONS_00012300-exon-sc0000143-1510915933:535107..535318Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1575043694:535107..535318TCONS_00012300-exon-sc0000143-1575043694:535107..535318Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1491911889:536028..536154TCONS_00012300-exon-sc0000143-1491911889:536028..536154Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1510915933:536028..536154TCONS_00012300-exon-sc0000143-1510915933:536028..536154Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1575043694:536028..536154TCONS_00012300-exon-sc0000143-1575043694:536028..536154Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1491911889:536872..537736TCONS_00012300-exon-sc0000143-1491911889:536872..537736Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1510915933:536872..537736TCONS_00012300-exon-sc0000143-1510915933:536872..537736Clytia hemisphaericaexon
TCONS_00012300-exon-sc0000143-1575043694:536872..537736TCONS_00012300-exon-sc0000143-1575043694:536872..537736Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012300-proteinTCONS_00012300-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000143supercontigsc0000143:531341..537736 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0215152 0.0250064 0 0 0.0235314 0.539729 0.610782 0.0372413 0.0693188 0.157966 0.0886576 0.162096 0.0168089 0.0876978 0.215746 13.4606 0.959667 0.0703612 0.0528346 11.7822 13.8686 0.161308 0.161234 2.97611 2.06734 2.53159 1.36037 0.048977 0.0249788
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012300 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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