TCONS_00012295 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012295
Unique NameTCONS_00012295
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1716

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012295 ID=TCONS_00012295|Name=TCONS_00012295|organism=Clytia hemisphaerica|type=transcript|length=1716bp
agaaaaacaaaaatgaaaaaactgacATCAGTTTTGGTATTCTGTATCCT
GGTTGGGTGTGGCATCAATGGTCTTAACATCAAGAACAAGAAAGATTTTC
GAGCTACACCGCCAATGGGATGGCTTCAATGGGAAAGATATCGTTGTATT
CTCGATTGTGAAACCTATCCTGATGATTGTATAAGAGATTCGTTGTTTAT
GCGTCAAGGGAAACGTTTACATGATGATGGTTATGCAGCAGCCGGATATG
TCCATGTCAACATCGATGATTGTTGGTCAGAAATGGAACGTGATGGAAAC
GGTACACTTGTTGCTGACAAAAAACGGTTCCCGAATGGACTTAAATCTTT
AGCTGATTACATGCACAATTTGGGATTGAAGTTGGGTATATACACAGACA
TGGGAACAAAAACATGTGCAGGTTACCCAGCCGCCATTTTTCATATGCAG
AAAGATACACAGACGTTTGCAGACTGGGGAATAGACATGATCAAATTAGA
TGGTTGTAACTCGTGCACAGACCTCTTCAAAGCTGGACATGAAGCGTTCA
AATTCTACATCAATCAGACGGGCCGTGAAATTTACTATTCGTGTGAATGG
CCCACATACTTGCCAGAAGATAAACCAAAGCCATATGCTGACATTGCAAA
AGTTTGCGACATGTGGAGGAATTACCAAGATGTACAGGATTCGTGGAGTA
GTGTGATGAATATTATCAATTACAATGGAGATCACCAAGACGAAATGATC
CCTTACATCAAACCTGGTGCATTCAATGATCCTGATATGCTTTTAATTGG
TGACTACAGCTTGAGTGAAGATCAAtcgaaaacacaatttgcaaTCTGGT
CCATCTTAGCAGCTCCATTGATGATCTCAGCAAATTTGGAGACAATGAAA
GATTGGCAAAAAGCTATTTTGTTGAACGAGGAGATCATTGCAGTAGATCA
AGATTCTCTTGGTAAAATGGGAAGACGAGTTTACAAAAATAGCAACCAAC
AAACGTGGGTCAAACCTTTAGCTGACGGTGGAATGGCTGTGGCTATCATG
AGCACTCGTGAAGATATTCCTGTTTTTATGAGCGTCGATTTCAAACTGCT
GAACATTACCGGATCATGGAATGCACGTGATTTGTATGCTTTGAAAGATC
TTGGCTCTTACGAAGGAAGTTTCAAAGCCATGGTCAACCCTTCTGGTGTA
GTCATGGTCAAACTCACGAAAGCGTCGCGTGTCATTTCTGCTgattttgt
ttaaaatggtTGATTGAAGAATTAGTTTATTGAAGATTATTGcattttta
ggagatttttttggatttttttattagttttccACACAGATTTTTATATT
GAACATAGAATTTTCATATAAGATAAAGATCTTTTTACATTTAGGGTGTC
AATTTTAGCTTTCAATAAATTCGAATAAACACACAAAGTCATCGAGTTGG
GGAGAGGCAAAATACCTTAAGACTGTCTCGATGGACTATAAAATCGCAAA
AGTTATGGAAACAATGGTTATGAAGTTAAAGAAAGAAAGTTAAAATCATT
GATTTTGACTCTTGCTTCTCAGAATCGAAACAATCGAAATAATTGATCCG
AATTTGTATCACTAACCAATTGTTGTTAATATGATTGTATATGATTTTGC
ATTCTTTTGAAGTAATATATGATATTAGTAGAAATATGTTTTATTATTAT
GGTAAGAATTTATGCA
Run BLAST on NCBI

transcript from alignment at sc0000143:449856..458570+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012295 ID=TCONS_00012295|Name=TCONS_00012295|organism=Clytia hemisphaerica|type=transcript|length=8715bp|location=Sequence derived from alignment at sc0000143:449856..458570+ (Clytia hemisphaerica)
agaaaaacaaaaatgaaaaaactgacATCAGTTTTGGTATTCTGTATCCT
GGTTGGGTGTGGCATCAATGGTCTTAACATCAAGAACAAGAAAGATTTTC
GAGCTACACCGCCAAGTACGTAAaacttaactttttgatttgatgTAGGT
acatctatcaaccttttattAACTTCGGCTTTTTAGTGTTTTGGTTATTG
GTTTTGGTTACAAGTTCACTTTAAACGTTCACGACACCAAGGactaaaat
gacgtcaatttttgacgaagaccctgcaatgttattttttgtaagagcaa
cggaactctagtttttttttttaattattttcaactgaggattgtttgta
aaaacatgaaactgccagtattgaaaaaataattttcattactttaacTA
CGATAGTGTTTTGGTTATAAATTTTCaaggaaatgacgtcaaaattcttt
gttttatgAGAATGCCAATGCAACGCCTTCCTCCTGATTCTTCCTTGTAA
ACTCGAGCCCAGCCTCCCCACGTTTTAAAGGTTGATAATAGTAtcttcat
gatatgcaccattgcaatgtcttccacggacccaacagctgattggttga
ctGATTGactgacgtattgactgattttacgtcacttacaaccaatcaga
gtccgtgatgtaatgtcaaaagacattgcaatggtgcatattatgTATTG
GAAAGGAAGAGTTTTTGACTCTTTTACTCTCTCGTATTTACAGTCCTTAT
CAGTCCcggtcccggggggggggggactagggcaagatgggttacgggga
tgctccgctggtcagggtaccttttctaacctccacgagtcccaggtagg
gtcgcaaaaacaccaaaatagaaaaatcagtccctcttAGGgtgcttttt
ttggaaaatttgggaaaaaagtagacaattttggaatttcagtcccattc
agggtcacttttttcgctaatttcgagtcccacgtagggtccatttttcg
aacctcagcggagcacccccgtcggtcgaCAAGGGTagtccccccccccc
ccggggtccCGGCctagtttttcttttgttcgGTCACTACGAAATTTGTT
CATCATTAAATTATTATCTTAAATTTACAGTGGGATGGCTTCAATGGGAA
AGATATCGTTGTATTCTCGATTGTGAAACCTATCCTGATGATTGTATAAG
GTGAGAATTCGCTTGAGTATTCTTCCTCTATCAGCCTATTCAATATTTAA
TCCGTAAAATCGCACTTAAAAAAACACTACTcctgaaaatgactaaaaac
tgaaaagaatccaaaatttaaaatcactTTTTCATTAGTTCACAAGGTAT
TATAGTAGGGGTGATCCATTTTTACCTGTTTTGGGGGTTAGGAGTTTTAC
CTGTAACGTCAGTTGTTttaccataaaaacttttgccaggCGTAATTCGC
CGtccccctctcaaaaaagtatcaaaatccTATTTACTTTTGAACCAATT
ACATGTGGTTGCCATGAAAGATGCTACAGATCCTAAGGGTTAGTCGTCGC
TCACAAAAAGTTGGTTCTCTAAGAAGTTCGAGAGAACAATCCCTTGCATC
TTGTTTTACTTTGTACAATAACCATTAACGAAACGTTCTCATATTTCTAG
AGATTCGTTGTTTATGCGTCAAGGGAAACGTTTACATGATGATGGTTATG
CAGCAGCCGGATATGTCCATGTCAACATCGATgtgagaaagattttttct
gcgaaatatttcttttactATATCTTATTTATTGCAACCATGGGATTTAT
AACATAATACCCAGTGGCTTTTATGATGATTCCCCGTCGGCACCTTTTGA
ACTCATACAATTCACCTTGCACAATCTCACAATCTACTGATATTGGTGAT
TAAATTTGAGTCAAACTTTCCAACTCTCAATGATAGAGGAGCTtaccttt
caaactttttatctAATTGGTGAAAGAAGGGGAGAATCTATAAAATACTC
ATTTATTTTGTTCAGCAAAGAAGATGATAACTAATTAAAAAAGGACTTTC
ATTCAAAATGTGCTAGAAAGTTCAAATGGAATCAACTTTGTAAACAACGA
TTTCTTTCTTCATTTAGGATTGTTGGTCAGAAATGGAACGTGATGGAAAC
GGTACACTTGTTGCTGACAAAAAACGGTTCCCGAATGGACTTAAATCTTT
AGCTGATTACGTAAGCTGGCTTCAATTTAATATTTACCTCTAGATACAAT
GAAGTTTATCCTGACTAGTCTCTAAAAACATATTAGATGTAGTAGATGAG
CTAAGGCATGGAAATATCTCTATCTGTCTGTCAGTTGCAGAAACATTGTA
GCAAATGGTTGGATGTTGCCTGACAATTTGCATACTTATATTTTAATGGA
AAATGTTTCTTGGGAATTCTCCTTGTTATTAAGTTATTCCCTTGGTGAAA
AATGGagtttttttccgattttcgaaaaactccTGTGTGACGTTCGACTA
TTTTGCTTACTATTCTGCTTTACAgaagattgttcttaatttgttctcgG
GTTGGGACCTAAATTGAGCCCCGGGTTTTAAAGTATATAAACTATCTTTC
TCACATCATTTTAGATGCACAATTTGGGATTGAAGTTGGGTATATACACA
GGTAAATGGATGAATCCGTCAATATTCACATTTTGCCGATAGTTAATGGC
TTTCGAAATAATAAAACTGTGCTATATCTAAACGACACAGTAATAACTAT
AACAGAAGATACTATAACTTtattaatcgcacgatgggttattttttctt
atttggcacgccctcaaagagagcaattaatcgttaatcacactctccaa
tgctgcgccaatgtttacaaaattgattttaatgttttttcttacatttt
ttttttgcatcgaacgttttaattgcattcaaaattcattttgtgagaaa
gaaaatctataaacaacaataaaagaaagacatagagagaagagaaaaat
ataaaactctcagtgtaatttctttaatttactttcctaactgggaaaaa
ttAGTgacagccattgtgcgattagctcgtaaccacataataactcgtac
aattcgaaaattgcactcgtgatttttttgtttcgagtttaataacaaaa
aaatcactcgtgcaattatattcgaattgcactcgatatcatgtgattac
atatacttatTTCATTTATAGACATGGGAACAAAAACATGTGCAGGTTAC
CCAGCCGCCATTTTTCATATGCAGAAAGATACACAGGTATAGACTCAtaa
ttaatttgtttttcttgaaattttaattGTTGCTAGATAGTGTACTCTAT
TCAAAACATTTcaatcttcataactcgaacatttCTGATCCTTGCAAATA
CAGAGGGGCTGTATCCGAGATATAAGAGAGTCGAAGCTTCTGATCTCCTT
ACATTTAGCATGACTAGCGAAACAAAAATGCGAATCTTCATTGGTCAACG
TTGCACCATGCCTTATTATTGAGTTAATACATTTGCAATTCATTCGGAAT
AACCcgccgtttttatcttaaacttgTGGAAACTAAAAGTGTTGATTCAC
CTTCGTCCTCAGTCATTCAGGATCtacaatcagtcagaaaaatattgaca
ggagAGGCTTTAAAATGACTCCCCTTCCCCCTGGTATAAATGTTGGGTAG
TTGGAAGTGTCTGTTGCATAACTCGTCTGTTGGGTCGCTCAAAAACATTG
ATATGAGGGGGAAGGGGAGTGAACTAGATTTCTACTCTACTGCCAACATA
TTAACTGACTGATTGTAGATGAATCAGATGCTAACTGTCCCCGTCGCAGG
AAAACCAAGCtacataaactcgcttttgaAGTATAGTacgcaatattttc
acattttaaTTATGAAGTCTTTCTATTCAATTTTCCTTTCTATCCACCCA
GACGTTTGCAGACTGGGGAATAGACATGATCAAATTAGATGGTTGTAACT
CGTGCACAGACCTCTTCAAAGCTGGACATGAAGCGTTCAAATTCTACATC
AATCAGACGGGCCGTGAAATTTACTATTCGTGTGAATGGCCCACATACTT
GCCAGAAGATAAACCAAAGGTAAATGTTAAAGATTAACACGTTCGCTGCC
AACTACGTGTAGtatggggggggggcgtacggcgTTTGCGATTTTCGAAA
TACCGAATAACTTTactaaaatttccgaaatttcgTAAAAGAATACTTGC
AATTTCGATACCGAtttttttggggtatttttcttcgttttgactaactt
ttcatcaaatttgatttttcatgtatgaattcctaaaaaaggggataaaa
aactttataatgCCGAAATgccgaagcaaaaattcatatATTTCCGATTC
CGAAACAATTttagaattccgaaataccgaaggaattttgcctgatttcc
gaaattccgaagaaaaaggGTCGATCTCCGCAATTCCAaaaaaccgtacg
ccccccataCGTAGAAGGGGGCGGGAGGTCAAAATATCTGTggtattttt
taaatctatgtAAAATTCTGCGTCGTTTGGTATACAATGTACAGGCATTG
GAAAATTCAGGTCACAGGAACctttgaaagtcaattttcgaaACTATAGT
TCTCTTCTGTATAAGTGTGCAACTCTTGTTTATCGACACTCTGCGTACAT
TTCTGGTTTGACCGATTATTCTTtcttcatgatatgcaccattgcaatgt
cttccacggagcCAACAAcagattggttgaaagtgacgtattgattgatt
tgatgtcacttacaaccaattaGCTATTAAGtctatgatgtaatgtcaga
agacattgcaatggtgcatatcatgaattctttaTGAATATGAATAAAAA
CCCTTTCGGTGCACAAGCAGAGAGTTCGCGCATTCTCAAACCGAGTCAGA
CCGAGGTTAAGATTTGAATAAATTTGAGTATTAGGTCTGGTACAGATAGA
ACCTATAAAAATTTCCAAGAGATTTTGACAAATTCTTAACATTGCCTTGT
CTCGACCAAATACCGCTGTTGCTTATCAAGTTtatattgttatcatcaaa
acaaaattttaacctATGCTTATCGTATCGACTTTTTTAGCCATATGCTG
ACATTGCAAAAGTTTGCGACATGTGGAGGAATTACCAAGATGTACAGGTA
ATTAAAATTATCgatttcaaattcaattgaCTCTCACCTGAATCTTTTCA
ATGCTACAGAAAAGGTTCAAGGATGCTCTCTCGAGTGCTTCAATGTAGTG
ATAAGGTCTAAATAGTGTGATAAGTCGAGGTGTGAGGGAGAATCACAATC
AGCGGGAGGGATGTGCTTTTTAGGAACCTGGGGAGTAAACCCACTCCTTt
ggtattttcttattttcttaatttcttcCTCACAAGTGTAAACACCTAGT
TAATCCTTCCAAATCATTTTAGTGATTCAAAGAAAGGGATCGATTTCATT
CTGAATTATATTCCTTACATTCAAAGAAATTAAGTTACACAACATATTCA
CAGGCGAAATGGATCAATGGAATCAGGACCGATTGCGCCTCGACAACGGC
TTcccgttggttagacgcaaaaacATCGAAAAACTTAGACCAACAGAACG
TTGTTATCGGTGGGTGgttctgattacccatgattcatttcgaccgtgaa
atgCACCTCATTGCTCAACTACGACGCTTTTTAAAATGATAGTTCATTTT
TCCCTGTTTCTCATTACCAGGATTCGTGGAGTAGTGTGATGAATATTATC
AATTACAATGGAGATCACCAAGACGAAATGATCCCTTACATCAAACCTGG
TGCATTCAATGATCCTGATATGGTAAAAGCATGGAGCATTCTCTTAAAAC
CCTTTATTAATTTAAGTAACCTCCATAGGATTGAAATCACTATTCCATCT
TTACACTGTGAGAGTGTATACTTAACCaatgttttatttcatttgatgat
tttaacctGGCACCTTTTTACCTCGGGNAAGAGTGTATCCTTAGCCAATG
TTTGATGATTTTAGCCTGGCTCCTTTTTACCTTGGAGCTGATTTTCTCGA
GTATTAAAACATTCTTAGTATTTCTATAGGAATATTCTGGCTTTCTGGTC
TTGCTAAATTATGAATTATTCCGAATCTGGATACCATACTCCCTAGTGCC
AGACGTGTCATAAAACTTCTAGTTACAGATTAATTTTACGTCTATTCTTT
TGATAAGACCGCAAGCATTGTGAAAGACTGAAGAAAACCCTCGCATGTTG
TCCCAACCCAACCCATCACAATAATGGAGCTTTTATGTTTAGGATTGAAT
TgtatctttattttttcattccagCTTTTAATTGGTGACTACAGCTTGAG
TGAAGATCAAtcgaaaacacaatttgcaaTCTGGTCCATCTTAGCAGCTG
TGAGTAATGGATCGTCCTCAATAAAGTTGAAAAGTTATTTTAAACCTTCA
GACTCATCAAAAGCCAACtgtttatagtttgttctaagAGCATTCAAACT
GGATGATTTTATGTTCTTTACTCTCTTTTTTTCAGCCATTGATGATCTCA
GCAAATTTGGAGACAATGAAAGATTGGCAAAAAGCTATTTTGTTGAACGA
GTAAGTCACTTCCGTCTATTGATCTTCTGAGCTTTCTTCATCCAAAGGAT
ACATTGACTGACCTCTGGCTATTATCAAAGTATCTTCTTAAGTCGTAATG
ggtcatttctttttttatccATACTTACAGGGGGTAGGCGAACATTTTTA
TGGGGcaatacaaaaaaatttcaaggtgTCTAAAGGAGTGttttgtttta
catttttccagggggtgaaaagtttttctaaaatttccagatgggagact
gattttagttcgtatTTTTTCCAtgaatttattttgcaaattttgccatt
ttccagcgGGTTTTCCTTCTTACTACTGCTTCCGTTTTATTCCTGAGAAA
TTATGAATTATCTCTCTTCAGGGAGATCATTGCAGTAGATCAAGATTCTC
TTGGTAAAATGGGAAGACGAGTTTACAAAAATAGCAACCAACAAACGTGG
GTCAAACCTTTAGCTGACGGTGGAATGGCTGTGGCTATCATGAGCACTCG
TGAAGATATTCCTGTTTTTATGAGCGTCGATTTCAAACTGGTATGAATCT
CCATATTATTGAAATTAGTTATACACAATTGCCTGTATAATACAAATATT
TACCCTAAAGAAAACAAGCTCAAAAATACGCTCAGCCCTTCAAACctagt
agtaagtaagtaattctgcgaccgcagtcggaggcgacccgaaggctcct
ctttcgatagctatctacctcaATCAGTGACAAAGtagtaagtgctctaa
agtaggttcgaagggtagagttataactctgagttttaacgctagacttg
aGGCTTAGGACCTtgggatctgaggatccaaaagttcaaaaatggtccag
taggtcttgaaatatagcctagaaaccaataaatccctcccagatcgaaa
taaccGATGAAATTATataagttgaaggcctgaaattgacattctcgctc
gaacttcaattttcgaaaaatggtaaattagctaaaagtgccaatatgtt
atggcactgattgctgaaggtaggggagggcgccactctttacccttgat
ccttctcttaattgctgagcatcaagcaaagaggcaccaagtaccatttt
gggaatcttaggtatgacccggctgggggttgaacccacaaccttgtgaa
ccgtagccggatgctctaccacggCACTACGGTTTTCCCTTAAACCTGGT
TGACCAATTCACGTTTAAAATGGCCCAAACTGAAAGctaaacacgttttt
ttataagaaccagtaaattgtGGTTTAGCCtgagattgttcttaaatttg
ttaaattgcttttgctttttaataaaatctgttTTAGGAGATATAAAATT
ATCTTTAGAATGGTACAAAAACATTGTTTAATTCTCTAGGGActacaagc
ttttatgccattttgaagttttgactATGTATAATTTTTCATTCCAGCTG
AACATTACCGGATCATGGAATGCACGTGATTTGTATGCTTTGAAAGATCT
TGGCTCTTACGAAGGAAGTTTCAAAGCCATGGTCAACCCTTCTGGTGTAG
TCATGGTCAAACTCACGAAAGCGTCGCGTGTCATTTCTGCTgattttgtt
taaaatggtTGATTGAAGAATTAGTTTATTGAAGATTATTGcatttttag
gagatttttttggatttttttattagttttccACACAGATTTTTATATTG
AACATAGAATTTTCATATAAGATAAAGATCTTTTTACATTTAGGGTGTCA
ATTTTAGCTTTCAATAAATTCGAATAAACACACAAAGTCATCGAGTTGGG
GAGAGGCAAAATACCTTAAGACTGTCTCGATGGACTATAAAATCGCAAAA
GTTATGGAAACAATGGTTATGAAGTTAAAGAAAGAAAGTTAAAATCATTG
ATTTTGACTCTTGCTTCTCAGAATCGAAACAATCGAAATAATTGATCCGA
ATTTGTATCACTAACCAATTGTTGTTAATATGATTGTATATGATTTTGCA
TTCTTTTGAAGTAATATATGATATTAGTAGAAATATGTTTTATTATTATG
GTAAGAATTTATGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006912XLOC_006912Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012295-exon-sc0000143-1491911889:449856..449970TCONS_00012295-exon-sc0000143-1491911889:449856..449970Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1510915933:449856..449970TCONS_00012295-exon-sc0000143-1510915933:449856..449970Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1575043694:449856..449970TCONS_00012295-exon-sc0000143-1575043694:449856..449970Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1491911889:450986..451055TCONS_00012295-exon-sc0000143-1491911889:450986..451055Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1510915933:450986..451055TCONS_00012295-exon-sc0000143-1510915933:450986..451055Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1575043694:450986..451055TCONS_00012295-exon-sc0000143-1575043694:450986..451055Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1491911889:451506..451587TCONS_00012295-exon-sc0000143-1491911889:451506..451587Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1510915933:451506..451587TCONS_00012295-exon-sc0000143-1510915933:451506..451587Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1575043694:451506..451587TCONS_00012295-exon-sc0000143-1575043694:451506..451587Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1491911889:451973..452065TCONS_00012295-exon-sc0000143-1491911889:451973..452065Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1510915933:451973..452065TCONS_00012295-exon-sc0000143-1510915933:451973..452065Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1575043694:451973..452065TCONS_00012295-exon-sc0000143-1575043694:451973..452065Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1491911889:452470..452506TCONS_00012295-exon-sc0000143-1491911889:452470..452506Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1510915933:452470..452506TCONS_00012295-exon-sc0000143-1510915933:452470..452506Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1575043694:452470..452506TCONS_00012295-exon-sc0000143-1575043694:452470..452506Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1491911889:453077..453141TCONS_00012295-exon-sc0000143-1491911889:453077..453141Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1510915933:453077..453141TCONS_00012295-exon-sc0000143-1510915933:453077..453141Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1575043694:453077..453141TCONS_00012295-exon-sc0000143-1575043694:453077..453141Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1491911889:453807..453974TCONS_00012295-exon-sc0000143-1491911889:453807..453974Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1510915933:453807..453974TCONS_00012295-exon-sc0000143-1510915933:453807..453974Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1575043694:453807..453974TCONS_00012295-exon-sc0000143-1575043694:453807..453974Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1491911889:454996..455052TCONS_00012295-exon-sc0000143-1491911889:454996..455052Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1510915933:454996..455052TCONS_00012295-exon-sc0000143-1510915933:454996..455052Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1575043694:454996..455052TCONS_00012295-exon-sc0000143-1575043694:454996..455052Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1491911889:455626..455727TCONS_00012295-exon-sc0000143-1491911889:455626..455727Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1510915933:455626..455727TCONS_00012295-exon-sc0000143-1510915933:455626..455727Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1575043694:455626..455727TCONS_00012295-exon-sc0000143-1575043694:455626..455727Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1491911889:456230..456304TCONS_00012295-exon-sc0000143-1491911889:456230..456304Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1510915933:456230..456304TCONS_00012295-exon-sc0000143-1510915933:456230..456304Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1575043694:456230..456304TCONS_00012295-exon-sc0000143-1575043694:456230..456304Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1491911889:456441..456505TCONS_00012295-exon-sc0000143-1491911889:456441..456505Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1510915933:456441..456505TCONS_00012295-exon-sc0000143-1510915933:456441..456505Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1575043694:456441..456505TCONS_00012295-exon-sc0000143-1575043694:456441..456505Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1491911889:456877..457045TCONS_00012295-exon-sc0000143-1491911889:456877..457045Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1510915933:456877..457045TCONS_00012295-exon-sc0000143-1510915933:456877..457045Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1575043694:456877..457045TCONS_00012295-exon-sc0000143-1575043694:456877..457045Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1491911889:457953..458570TCONS_00012295-exon-sc0000143-1491911889:457953..458570Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1510915933:457953..458570TCONS_00012295-exon-sc0000143-1510915933:457953..458570Clytia hemisphaericaexon
TCONS_00012295-exon-sc0000143-1575043694:457953..458570TCONS_00012295-exon-sc0000143-1575043694:457953..458570Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000143supercontigsc0000143:449856..458570 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.93756	3.25772	0.257069	0.0840001	0	0	3.55937	2.48039	40.1057	24.2249	33.5235	33.3708	27.5958	27.4697	32.2939	45.673	6.95285	5.001	16.342	15.2562	1.95593	1.6545	2.78949	4.04789	2.74256	3.61228	1.15202	0.700345	11.2676	9.25102
Blast
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BLAST of TCONS_00012295 vs. Swiss-Prot (Human)
Match: NAGAB (Alpha-N-acetylgalactosaminidase OS=Homo sapiens GN=NAGA PE=1 SV=2)

HSP 1 Score: 342.043 bits (876), Expect = 3.091e-111
Identity = 171/378 (45.24%), Postives = 243/378 (64.29%), Query Frame = 1 
Query:  106 TPPMGWLQWERYRCILDCETYPDDCIRDSLFMRQGKRLHDDGYAAAGYVHVNIDDCWSEMERDGNGTLVADKKRFPNGLKSLADYMHNLGLKLGIYTDMGTKTCAGYPAAIF-HMQKDTQTFADWGIDMIKLDGCNSCTDLFKAGHEAFKFYINQTGREIYYSCEWPTYLPEDKPKP-YADIAKVCDMWRNYQDVQDSWSSVMNIINYNGDHQDEMIPYIKPGAFNDPDMLLIGDYSLSEDQSKTQFAIWSILAAPLMISANLETMKDWQKAILLNEEIIAVDQDSLGKMGRRVYKNSNQ-QTWVKPLADGGMAVAIMSTREDIPVFMSVDFKLLNITGS--WNARDLYA------LKDLGSYEGSFKAMVNPSGVVM 1206
            TPPMGWL WER+RC ++C+  P +CI + LFM    R+  DG+   GY ++NIDDCW    RD +G L+ D KRFP+G+  LADY+H+LGLKLGIY DMG  TC GYP      + +D QTFA+W +DM+KLDGC S  +    G+      +N TGR I +SC WP Y     P+  Y+ +A +C++WRNY D+QDSW SV++I+N+  +HQD + P   PG +NDPDMLLIG++ LS +QS+ Q A+W++LAAPL++S +L T+      IL N  +I ++QD LG  GRR++K  +  + +++PL++   A+   S R D+P         LN TGS  + A+D+Y+      L+D    E +F  ++NPSGVVM
Sbjct:   25 TPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIG-GRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATGRPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQPVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNPLMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNFTGSVIYEAQDVYSGDIISGLRD----ETNFTVIINPSGVVM 397
The following BLAST results are available for this feature:
BLAST of TCONS_00012295 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NAGAB3.091e-11145.24Alpha-N-acetylgalactosaminidase OS=Homo sapiens GN... [more]
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