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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012234 ID=TCONS_00012234|Name=TCONS_00012234|organism=Clytia hemisphaerica|type=transcript|length=1420bp
ggggagaaaaaaatcaggtcaaagttttggtcggggataaaaaaatcggg
taaaagttttggttggGTGATCAAATGTCGGGTATAaaattcgtcgggga
aaaatttcgtcaccctcTCAAAATGTTTGTCACTTTCCCccaacattttt
ttccccgataaggtaaaatGACAAATACCGgcttaatgaaaaataaaagg
gCCTAATATAATTTATCATGAGAATTGTCAATACCAAAAAGGTGAAACTT
TTACTGCTCTATATAATATGTTAATAACGTTTATTTGGCACTGTAAAGCA
AAGGAGGGCCATGCGATggagtaccttaagggaactaattttcacggtaA
CGGATTTATGCGTTTTTCGGtgtctaccgcgaaaattagttccgcgaaat
acaatttttactaaaaattcTCGAAAACTCCTAGGGAAATGAGAGAATTT
CGACAAAAACTGGGTGTcaaccgtgaaaattagttccacaaAAACGCAAA
TTTCATATCCTTGCACGGCGAAAATAAGtgccgcgaaaattagttccctt
aaaatACCATGAAAATTAGCTTGTTTTTTGTGACGTTGCAAGCCAAAAGA
CGCCCATTAAACAACGTCCACCACATTCATGGTCCCTAAATTAACATAAC
ATGTAAGCTAGCCTGAGACAAAATGTCAACTTTATACCTAATCTTGTCGC
TGTGCCTTCTTCTTTTTTCGATTGATTGATGAGgagattcttgatattca
tgatgttaTATTTCATACGGAAACACACGAAAAacaccgggcgtttgcca
ccagcattattgtttgaattcaaaatttgtggcaaacgcccggtgtTTTC
GGGTGTTTCTGTATAAAAGGTTACGTCGTGAATTTCAAGAATTAACCCTG
GGAAACGGTACATCAATCGGTCGACTATCATCACACCCTGGTTGAAAATG
ATGGGCCGCTCTCTTTAGAGGTTTGACAagctcccttatttgatgaaaat
caaatttccttTGAAGaccgaattagagagcgtcaactgtatataaaaaa
aagctCATAGTAAGGAGGCATTATTCTCAAGAATAGCAGACGCTAGCTAG
CCAAAAGAGAAATACAGTATAggcaaaaattggcttttttgaaaaagtta
ttaACGTTAGCGTTTTtcgccataacttttgatttagatAAGTAAGcata
atgaaattttctgtgATTGTTGCTCGTACGTCATTGCGATGCCGAAAAAA
TATccggaaaaacatttttgcttttgcttacgattcttttttcaaatcta
ccgacaagaagttttttttataacgaCATCCAAGATTTTTCAAGCCTtcg
aattttcttaactttttgagttttaagcctaaaaatgttgttaatatgtt
cttaattccaccattttgtg Run BLAST on NCBI transcript from alignment at sc0000141:355642..357061 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012234 ID=TCONS_00012234|Name=TCONS_00012234|organism=Clytia hemisphaerica|type=transcript|length=1420bp|location=Sequence derived from alignment at sc0000141:355642..357061 (Clytia hemisphaerica)
cacaaaatggtggaattaagaacatattaacaacatttttaggcttaaaa
ctcaaaaagttaagaaaattcgaAGGCTTGAAAAATCTTGGATGtcgtta
taaaaaaaacttcttgtcggtagatttgaaaaaagaatcgtaagcaaaag
caaaaatgtttttccggATATTTTTTCGGCATCGCAATGACGTACGAGCA
ACAATcacagaaaatttcattatgCTTACTTatctaaatcaaaagttatg
gcgaAAAACGCTAACGTtaataactttttcaaaaaagccaatttttgccT
ATACTGTATTTCTCTTTTGGCTAGCTAGCGTCTGCTATTCTTGAGAATAA
TGCCTCCTTACTATGagcttttttttatatacagttgacgctctctaatt
cggtCTTCAaaggaaatttgattttcatcaaataagggagctTGTCAAAC
CTCTAAAGAGAGCGGCCCATCATTTTCAACCAGGGTGTGATGATAGTCGA
CCGATTGATGTACCGTTTCCCAGGGTTAATTCTTGAAATTCACGACGTAA
CCTTTTATACAGAAACACCCGAAAacaccgggcgtttgccacaaattttg
aattcaaacaataatgctggtggcaaacgcccggtgtTTTTCGTGTGTTT
CCGTATGAAATAtaacatcatgaatatcaagaatctcCTCATCAATCAAT
CGAAAAAAGAAGAAGGCACAGCGACAAGATTAGGTATAAAGTTGACATTT
TGTCTCAGGCTAGCTTACATGTTATGTTAATTTAGGGACCATGAATGTGG
TGGACGTTGTTTAATGGGCGTCTTTTGGCTTGCAACGTCACAAAAAACAA
GCTAATTTTCATGGTattttaagggaactaattttcgcggcaCTTATTTT
CGCCGTGCAAGGATATGAAATTTGCGTTTttgtggaactaattttcacgg
ttgACACCCAGTTTTTGTCGAAATTCTCTCATTTCCCTAGGAGTTTTCGA
gaatttttagtaaaaattgtatttcgcggaactaattttcgcggtagaca
CCGAAAAACGCATAAATCCGTtaccgtgaaaattagttcccttaaggtac
tccATCGCATGGCCCTCCTTTGCTTTACAGTGCCAAATAAACGTTATTAA
CATATTATATAGAGCAGTAAAAGTTTCACCTTTTTGGTATTGACAATTCT
CATGATAAATTATATTAGGcccttttatttttcattaagcCGGTATTTGT
CattttaccttatcggggaaaaaaatgttggGGGAAAGTGACAAACATTT
TGAgagggtgacgaaatttttccccgacgaatttTATACCCGACATTTGA
TCACccaaccaaaacttttacccgatttttttatccccgaccaaaacttt
gacctgatttttttctcccc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012234-exon-sc0000141-1491911889:355642..357061 | TCONS_00012234-exon-sc0000141-1491911889:355642..357061 | Clytia hemisphaerica | exon |
| TCONS_00012234-exon-sc0000141-1510915933:355642..357061 | TCONS_00012234-exon-sc0000141-1510915933:355642..357061 | Clytia hemisphaerica | exon |
| TCONS_00012234-exon-sc0000141-1575043694:355642..357061 | TCONS_00012234-exon-sc0000141-1575043694:355642..357061 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000141 | supercontig | sc0000141:355642..357061 . |
Blast
The following BLAST results are available for this feature:
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