TCONS_00012194 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012194
Unique NameTCONS_00012194
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2985

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012194 ID=TCONS_00012194|Name=TCONS_00012194|organism=Clytia hemisphaerica|type=transcript|length=2985bp
ATCATTTTCTCccaactttttcttttcagaaagaCATGAAAATAATCTAG
AAATAAAACAGTGAGTGCCAGAAATAGCTTCAAaacaacttgcgaattga
gagCAACTTTGGGCGTACATGACTGTGCGCCTCTTTATCGAGGACTAGTG
ACGTCAAACTGGCTTCTGTGGCGAGCTTCGAACACACGCCAACGGCTCCG
CGAGTCCCAAACACGTTGAATTTGCCAAAAACACAACAGAAAAAGAACGG
TTTAGGAGGCCATCCAACTAAAATGGGTCGAAAGAAAATCCAAATCTCTC
GAATCAACGATGAAAGGAACCGTCAGGTCACCTTCACTAAAAGGAAATTT
GGTCTGATGAAGAAGGCTTATGAACTAAGCATCCTGTGTGATTGTGAAAT
TGCCTTGATTATCTTCAACTCCAGTAACAAGTTATTCCAATATGCAAGCA
CAGACATGGATAAGATTTTGCTGAAATATACAGAATACAATGAACCACAC
GAAAGTAGAACAAATGCAGATATTCACGAGAcaatttcaagaaaagaaaa
caagaatTGTGGATCTCCAGATGATGACTCTTTTGTCCTTACTCCAAGAA
CTGAAATGAAATACCAAAAGATTAACGAAGAATTTGAAATTATGATGAAA
AAGTCCTCAAATGGGGTAACTTCAAGTTACCCACAGATGGGATCCTTACC
ACACAATATGCCCTCTCCCCATGACGATACTGGAAAAGATATGAGATCAA
CAACTCCTTTACAAAGAGATGGTAGATTGTCTGCTAGCCCACACCCTCAT
GCACCGCTTCATCATGGATTAACATCACCGCCACCACAAAACTTATCTTT
ACCAAGTCGCAGTCCACACCCAATGAACCCACCACCTCTAGGAAACACGA
ATAACAATATCAGTCGAAGTGGAACACCAAACATGAAACAAGGAGGAATG
CAAAATTCACGAGCTCAACAAAATCACACACCGAATCAACAACTGATGCA
TGGAAACATGGGAAACTCTGAGTCAATGCCAAACAATATGCCTAGTCAGA
CCTTTGGAGGTGGAGGAGGAGGTGGCTCAATGCAACCGCCAAGCTTGCCA
TCAAATTTCCCAACGAGTTATTCAAGTTATGATGTAGATACTGGTCAAAT
GTCTTATGGAGTTACCTCAATGAACAACAGCATACATTCTAGTCAAGCAA
TATCCCACAATCCAACACTGCAAAGGTCACACAGTTTGAACAACAACAAA
CCAAACATGAACATCAAAGTTGAGCCACCAGACCACATGAGGGGGCCGTC
CCCTTCTATTCACAACTTTCAATCTCCTAATCCATTTCATCATACTGCGC
CACCATCGCACCATAAAGACTTTAGTGACCAGAATAATATGATGTCACTT
GGTGGTGGTGGGCCTATGTCTAAGAGACAGCGTATAGAAGGCCATAATGA
TGGATGGCAGTAGCCCAGTTTAGACACTGTGTCAATGATAACGCAACATA
ATGCGGGTAAACCCACCATGCTAGCCTGACAGATAGGCTATAATCACCAT
AATTGGGTGTAGTAGCGCCATAATGAGTTAAATTATGCTTTTCACACCTC
GTTCAGAAAGATTGGATGGTTTCTTTTTTGAGTAATAGTTGGTTGGTGtt
tatttttgctgctggaaCGAAAGTGTATTATTTTCCCTTGTTCCTGTATA
AACTTTCTTAAGAAGGCATTCAGTTAGTCTTTTTCATCATTTATAAACTC
AACCTTGTTCATATACTAAAGACAGTTAATTGACTCatttaaggaaaaaa
aaactaaaattttctttcaattttttaaaaatacttttcatttctttttc
caatatatttttttgttgttttgttcaCTCGTATAATTATGTAaatagtt
tttcttaaaaaagccaaaatttaaGACAATGACAGTTTTTATTATTGAAA
TAAGGcgcttttttaatatttgcaaGAAATTTTATTACGGATTACTAGTC
AACTTTATCcaaattatttttgggggtATTTCAACAAGTTAGGTGTAACA
TAATCTTCCAAACTTTTTGTTTCTGACAGTGACGAGCTACTCTCATGTAC
CTAATACTtcaatcgtagaaattttagcgagactaattttagcgtatatt
agcgagtcagtaaaatcttgattttttttggatttattttagcgaatcac
gatttcgattcggcgtgttttagcgagatttattttagcgaaaataggga
aaactcgctaaaacgctaaaattagtctcgctaaaatttctacgattaca
GTAGCCGTCTCCCTCCCGCTAAttaatctttcgaaaattttccacccagg
acatttttattggaaccccctccccccgcttattaagttttgaggtTTTT
TCCAACTTCCcctcccccggctattaggtacccgagagtaacccAATTCA
TGCAATCTTTAACTCACTCCTCGGGCGAATGTCTTACTCCAAAAAATCTC
ActtaaattaaacaaaaaatgctTGGTTACGTCAATTTCGCATTCCCTGA
GTTTAGCAGCTTGAGaagatttgtttattttataattttttcgtATATGG
TTCAGAGATTTGCTGCAGTTTGTTTTCTACtttcaatgtatttttcttAG
CATGATGTAGTTTTGTTTAGTCTTATTTTCAATTGCTTCATCTGATCTGA
GTGCTTGAAATATGGATTgaattcttgcctttcatgaaAATCAGATCTTT
CCTAGTTTAAGCCCAccttatattttataaattttttcttttgaatggta
gtagaatttgttttgaaaatggagtATGAAAGCTTGTATTCATGTAAATA
GAACACACCCTCTCTCTGAAACATACGGTttggaaaaagacaaaaagaag
aaatgacaaaatatgacactttctttttcattttcattttttttcaggat
tttgtGTCTAAATAACTATACAAACCTATCCGGAC
Run BLAST on NCBI

transcript from alignment at sc0000141:118380..128993-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012194 ID=TCONS_00012194|Name=TCONS_00012194|organism=Clytia hemisphaerica|type=transcript|length=10614bp|location=Sequence derived from alignment at sc0000141:118380..128993- (Clytia hemisphaerica)
ATCATTTTCTCCCAACTTTTTCTTTTCAGAAAGACATGAAAATAATCTAG
AAATAAAACAGTGAGTGCCAGAAATAGCTTCAAAACAACTTGCGAATTGA
GAGCAACTTTGGGCGTACATGACTGGTTAGTATTTTTAGAAAGTTTATTC
TTTCTCTCTTTTATTACCGAATCGCCGTGAACTGCTATTTTTACATTTTA
ATCAATGTACTAATGTATTAAAATAACTTTTGTTTATAATGGCGAAACAT
ACATATTAAGGTATGCTGCAGAAAATTGTCAGCTACCTGATATGCAGTTG
TAATTTTTTTCTGTTGTTTACAGCAAAATGATTATTTTTTGCAAACAGTA
TGTTTCTGAGAATAAAATATATAAAGTGTGTCACTTACTTAATAAAGAAT
ATTGAATTCTAGGTTAACAAAGAAGAGGTTGATTTGGATTTCTGTTCCGA
GAATTCACCAAAATTTTCTTTAATATTTTCTCACTTTTCAAGAGAAGAAG
CTTTTTTACACTCGCGAAACAAAATAATAAGTTAAGAATCTGTTTTAAAT
ATATTTAGTAGCTACAGTACAAAAATAAAAATAGAAGTTGGAGGACAAAA
CACGAATAGATCTCTCTTTCTTATCAGTTCAAATTTTTGCAGTACTAAAC
TTTATGAGAGATATATTTTGGCAGCATATGCAATTTATGCAAAGAAAAAG
TTCTCGAAAAAAATGCAACTAATACTGATGAATAATTTAGTACATCTGCA
TCTTCGGTTTTGTCTTGCTTATCAATCACCCTCGAAATTTTTCAATTGAC
ACGAGAAAGAAGAGAAGGTGAAATCTTCAGAAAAGAAAAATACACTAGGT
CCAAAGTATGTTTCGCCATTATTGCAATTATATTCGTTTCCTATATATCT
GTCTACGGAGGTATTTTTACTGCCTTTCTACACAAAAAAAAACCACATAC
CAACGTTGCATACCAATAAAAACTAGTGTATCATTTGAATGAAATTTTCC
TATTCGTGCTTCAGCTCACTTTCTGTACAATGCTTAATGAGGCATTAATT
CAGTTAAAACATGTAAATAAAAATCAAACAACGCTAATTTGATTTTTTCC
GCAAAAAATCTGATGGTTTATGGTTGTCAATTTTCAAACATTGTTGAACA
AATTATACTGTCTGTTTTGTTTAAAAATTTTTTCCAAATGTTATAAGCCT
CACTTTGCATAAAGAATCACGCAAACTATAAGACCAGCTTTTGAGAGAGA
GAGAGCTCGTACAACTTTCACAAATTAGTGTGTTTGGGGTCAGGGTACCC
GATCTTTGACTTATATATTGATCGGGTATGCAAAGCTTTTGTTACTTTTC
TTTACTTATTATGAAAGTATTACAATGTTCTAATAAGCTTCTCTTTGAGA
AAAAAATTCTTTCAAAACTTGTTCATTATAGCGTGCACCGTTTATTATAA
AAGTTCAACTTCGGCTTTATAGTTTCTTCCTATTAAATTGAGGTGAAAGT
TATAACACAAAAATGCGTGTCTTTTTTATAGAAGAGAGAGCTATTTTGTC
ATATCTATCTTTTTTTGTTGAATGTAGTGATTTTTAAATAGAGTTTTCAA
GGCTTTTTGTGGAAGGGAGATTTTTAAAACATTTTTTGATGTTTTTACAA
TCAATAGTTTTGTTTACACTGACAACTCAAACTCCTTTGCTCTCATAACT
GTTATCTTTCCTTGAAAATAATAAAATAAAGAAAAGGCCTTGCTTTCTAT
TCATTCCTTACTATGGCTACCCTCTATTTTTCTTTTGTTATTATAACGTA
TACCATTTATTTTCATTTCTGTAGTGCGCCTCTTTATCGAGGACTAGTGA
CGTCAAACTGGCTTCTGTGGCGAGCTTCGAACACACGCCAACGGCTCCGC
GAGTCCCAAACACGTTGAATTTGCCAAAAACACAACAGAAAAAGAACGGT
TTAGGAGGCCATCCAACTAAAATGGGTCGAAAGAAAATCCAAATCTCTCG
AATCAACGATGAAAGGAACCGTCAGGTATAATAAAACCTTTTAAATTTTT
TGTTGTAATTTTTTCTTCTCCCTCTCCTGATGACCTCCTACCCATCAAAG
TGAAATGTATTTATTTATTTTTGCAATCAAAATAGTGAAATTCTATTTGA
AGGGCCACAGTGAGACTAAAAGTGGCCTTGACTAGAGGATGTGTTATTGC
TTTTGTAAACATTTAGAAATATTTTAAATGTTGAACTCTGAAAAGTCAAT
GAGTAAATGATTTTCAAGGTCAATATTGAAAATATAGATTAAACAAAAAT
TTGTGTCTTTCATATTCAAAGGAGGATGCTTTTTACTGACCATATCCCTG
AAATCACTTATTTGTTTTACCAATTATCAATTTTTGACAGAGGATATTTT
ACACCAAAATTTTTGTGGTCATATATTTATATGTCTGTAACAAGATACTT
CTTATGCTACTCAATGAAAAAGGGTGACTCAAGCCTATTCATTTTCTCCT
ATGATTGGTTACAACTTGTAATAAATGGGTTTTAATATATAATTATTAGG
CCACAGGATAAGAGATCTAGAATTTTTTGCTTCTATTCACAAACATCAAT
AAGATTTGATTATTTGAATCACTGTTTCATGTAAAGTTATAGCATCTCAA
TCAGTATTGTTTTTTTCTCAAAATTCATGAATAAAACAATGTATCGTATT
CATAAGTGAAAATAATCAATTTCAGCAGGAAATCTGATCAAGAAACTATC
TGATACAAAAGTTCACTGTGTTATATTGCCTTTGATTGCCTTCAACTGCT
TTCAATATAAAAATTGCGCAAAAAAAGTTGTAAGAGAATTTTTTACAGGA
AGTTGTTAACATTAATTTCTTCTTGAAAAAGAAATAGCATTCCTTTTACT
TCCCTTGTCAACATCCTTCCCTTAAAAGTTACATCATTGATCATTTTCAT
TTTGGTGTTGCTCATTTTTCTTACAAAAGGGAAATTCAAGGCTTTACATA
TTATGAACTGTATCATTTCATTAAGTATCATCATATTTCAAAATCATTGA
CCTCGATATTGATACTGAAAATTTTTATACATAATGTTTTAAACCCATGC
AGTGATAATGCACCGTTGTTGTGTCTACTACCTATTGCAATTTGTCTACC
GTCCTTTTTCTGCAGTCACCATTGTTGAGTNTTGTGTCTACTACCTATTG
CAATTTGTCTACCGTCCTTTTTCTGCAGTCATCCTTTGTTCAGCGATAAA
TCTCATCTATTAATTCATAAGATTCAATGTCACGTAGATCTGTTTTATAG
TGATTAAAAAGGGCTGATAATGGGGATGAATTCATTTTAGTTTTATGAGA
GAAATCTACATTAATTACAAATTTTAATGATAAATTTTAGCAGAATGCAT
TGTCATTTGGCATAAATTGATTGAGCGAAAAAGAAATCAATTGATTTACA
ACTTGTTTTTGTCATTTATTTGTAAAAGGATGTCATTTAGGAGAAAGCTT
TTTTTAATTCCCTATAATTGCCCTCAATTATTGCTAGGATGCAAAAGTCA
AAAGGTTCAAACTGTCATATACTTGACTTGTATAATCAGTGACGTTATTC
TGTCAAAACAAAAAAAACATTTTTTCAAAACTCTTAAAAAACTTAAAGTT
TAACATTTTTATACTTTCCTTAGATATTTTTCTGTCTCTACTTCTAAAAG
AACATTTTAACAAAAAAGTAGAATGTAGTAATTACACAATCATTTCAAAT
TAATTGAAACATAATTACACTTTAATGTTGTACCATTAGTGGATAATTTC
ATCCCTTTCATATTTATATTAAACATCTAATTATTGTTTCATATTTTATA
AATATTGTTCTTCTTCATTAACCCTATTATGCAATCTTTTACCACACAGA
GAATTATTTCAGAGACACAAAGAAATTATGAAATTCCATATGAAAATTAC
AAGAATGGAAAGTTGAAATTATGTTTTGGCTTGCCTCACTGATAACTTGT
GCCAAAAGCCTGATACGTCCCAATATTGTCTACATTCTCTCTACTTTTAT
GACACATGTTTCTTAATAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCCCCCCCCCCTTCTTCACTTTTTTGGAAGGTGTCATCCCCCCGGG
TTCGAACTATGAACAGTCTAAACAAGCACAACAATACCACGGTAAGTGTA
AACCACAGGTTGCAGGTTTCAGGTCACAGGTTACAGGTTACAGGTCACAG
GTCAGTGTTGGTCAGCTTTAATTACTGTAAAACACAAAAAAAATGTTTGA
AAAACAGTTGTTAATGTCAAAAATATAATTCCAAAGGTATTTTATTGATC
TAGAACTATTTTAAAGCTAAATATCTACCCACGTGCTGACCATGTGATTT
CGCGTTTTATTCCGTGTATAACACGGACCTGTAATAGTTGTATTATATAT
TACATCTATATCACACATGTAAAAAAAATAACTTTTCAATGTTATACGCA
TGTTACGTATGTTATATACAAAGAATAAAGAAATATTCGAATATCGATCT
CAACCTTTGCTTAACATAACATAACAGGAAAATAGCTATTTCACAATCAC
TATGTCATATCTCATTTTATCTCCTGCATCACCTTGGGTATGATAACAAG
AATTGATGAAAATAGCGTCAATGGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTAT
TTATTGTTTTCAAAACCTGTCAATCTATATCCACTTGCAGCGTCAGCATC
CTATTATGCATGAAGAATATTTTATTGTTAATTGGCGTACAAAAGCTCAT
ACTTTCAGATAACATAATTATTTACATAATTTAAGTGTCATTTGTTGTCA
ATATTTGGGGATGATGATTTGTCGTTTAAGTCTTCTAAATAACATTATTA
ACATATTTTGATATTAGATTTCCATTAGTTATAATATTTTCAGGAACTTA
TGTTATGAGTTGTATGTTATGAATTGTATGTTACGAGTGCGTTACAGTTT
TCCGGTCTGTGTTTTGTTAACCTGTAACCTGTGACCTGTAACCTGTAACC
TGTGACCTGTAACCTGCAACCTGTAACCTGCGGTTTACACTTACCGACAA
TACCAGCACCAAAAATCCCTTTGAAATTCCCAATTTCCATCAACAATTCA
GGAATAGAATATTTTTCCAAATTCTGAAACTCCGATAATATTTTGTTTTT
CTGGACTGAAATAGACCTATTTTCTGTCTTAGACATAGGACCTAATTTCC
GAAATTACGTCCAAATATTCATAAAATTTTGCCACTCCGCCCCAAAAATT
GCATGATTCTGCTCCTCGGACAACCATGAAACTATTCAAAACCGTATATG
TATAACAGTTGCGAAGCCCTCAAAAGTACCCTACTAATGTTAACAAATGA
TGACTAATGTAAAAATGTCTCTAAAACGCAATGGATCAAAACGCGTATCC
AAACACTTTCATACAAATGCTTAAAAAAGTTGGTATTGTGAAGTATGATT
ATGAAAGATCTACATAATGTTAGAANAAACCATATTGTCGAATATTGTTC
GTCAATATATTGTGTAGTCTAAGTAGCCCTTTAGAAATAAGGTTTTTCTA
AGTTTATCATTTCTTCAATTTCAGGTCACCTTCACTAAAAGGAAATTTGG
TCTGATGAAGAAGGCTTATGAACTAAGCATCCTGTGTGATTGTGAAATTG
CCTTGATTATCTTCAACTCCAGTAACAAGTTATTCCAATATGCAAGCACA
GACATGGATAAGATTTTGCTGAAATATACAGAATACAATGAACCACACGA
AAGTAGAACAAATGCAGATATTCACGAGGTATCTTACTCTCTTCATAATT
ATAAAGTTTGTCAGCAGCTTTCTACAACACTAGCTTAGATACTGCCTTTG
ACTGAACCAAACCTAAAGTAGCCCAACAGCATCAATGATAGCAGGGACCT
AGATCTAGCTGGAGCCTTAATTCATTCTTAAAATACAAGAGGAGATTGGA
TGAGAGTGTCCTGAAACCAAATGCCTAAAAAATGATAGATGGTGTGACAT
CAGCTGAATCAGAGGGCTGTGAAGTAAGTAAGTTCGCAGTCAAGGGCAAT
CTGAAGGCTCCCTTTTTTCTAGCTGTCTTCCCTGAGGGGCACCATTCCTT
TCCCTGGATTTCTGCACTTGCCCTTGATCAATTGCTGAGCATCAAGCAGA
AAGGCATCAAGTACCATTTTGGGAATATTTGTTATGACCAGACAGGGGGT
TGAACCTACAACCTTGTGCATCATAGCTGGATGCTCTACCTCTATACTAC
TGCTAGAGAGCTGAGGAGAACTGTTTATGCTTTAAATTAAAATGATGTTG
AACCTTTGTATTTAGAATTAGCACTTTCAAATTCTCTCTATTTTTGTAGA
CAATTTCAAGAAAAGAAAACAAGAATTGTGGATCTCCAGATGATGACTCT
GTAAGGGAAATTTATCTTGACCCACCCCTGCTTCTCCACACAATTCACAT
AGATCTGTAAATAAAAGCAGTGGAACTATCATGTCATGGGAACTATTTTC
TATTTCTCAATTTCTTAGTGTGATTGCAACAAACAAAGAAATTTTTTATT
GACCTATCATTTATCAATAATTATCTTTGATTGTTTGCTCCCCTCTCTGG
CTTTTTCTTTCTTCTTCCCTATTGAGATACCATATGCTTCCTTTTGGATT
GTCATGGTTTCTCAAATTTGAAGAAAGACCCTCCTTCTTTTTATATTGCA
AACTGATACCTGCAACTTATAATAAATAATGTCTATACTAATGCAAAAAA
AATTACTTAATTTGAAAGCTTTCTTTAATATTGATTTTGTGCTGCACTTT
CTCTCTCCCTCTCTTCATAAGGCCATGTTAGACGCAACATTTTCTGCCAA
CATTTTAGAAAATTTTCTTAAGATAGGTAAAATTTTACCATATGTGAGCT
TTTAAAAATTTTATTTTTTTTTCTCACACTTTACCTTTTAGTTTGTCCTT
ACTCCAAGAACTGAAATGAAATACCAAAAGATTAACGAAGAATTTGAAAT
TATGATGAAAAAGTCCTCAAATGGGGTAAGAAGTTTTTTATGAATTACCC
AAAGTAAAGTAGAAGTAAGATTTCAGTTTGAAACTGATATCGAGAATTTT
CAGCACATCTCAGATTTGATTAGCCATTAAACACACCGAAAAAGTTTCTC
CAATTTCTTCAGACTTGACAACTTTTAAAAACTCAAGCTTTGTACCTTAT
TTGACTAGGAAAAATCTTTTGTGTAAAAAGAGGACATAGAAGGTAGAAAT
GATGATTCTTATATCCAGGAAAATACCTGAAGACCTGGAAATGTGTTCGG
TCACAAATTGAGATTATACTAGCCAAATAAATAGTAGGTCTACTTAAGTT
ATTAACACGCTTTACAACACGTCTATTGTTGTCTATTTTCTTAGGTAACT
TCAAGTTACCCACAGATGGGATCCTTACCACACAATATGCCCTCTCCCCA
TGACGATACTGGAAAAGATATGAGATCAACAACTCCTTTACAAAGAGATG
GTAGATTGTCTGCTAGCCCACACCCTCATGCACGTAAGTTGATGGTTTTA
CGTTAAAATAAACAAAATGAATAAAAACCACGTTGACCCAGCCAAAAATA
TACTGGTTTTTAAGCAAGTTGTTTATTTGTTCTTTAAAAGACATACTTCC
CAGTTACAAGTTTCATATAAATTTTTTTAGCGCTTCATCATGGATTAACA
TCACCGCCACCACAAAACTTATCTTTACCAAGTCGCAGTCCACACCCAAT
GAACCCACCACCTCTAGGAAACACGAATAACAATATCAGTCGAAGTGGAA
CACCAAACATGAAACAAGGAGGAATGCAAAATTCACGAGCTCAACAAAAT
CACACACCGAATCAACAACTGATGCATGGAAACATGGGAAACTCTGAGTC
AATGCCAAACAATATGCCTAGTCAGACCTTTGGAGGTGGAGGAGGAGGTG
GCTCAATGCAACCGCCAAGCTTGCCATCAAATTTCCCAACGAGTTATTCA
AGTTATGATGTAGATACTGGTCAAATGTCTTATGGAGTTACCTCAATGAA
CAACAGCATACATTCTAGTCAAGCAATATCCCACAATCCAACACTGCAAA
GGTATTTGCTTTCTTTATAGTTTAAAACAATTTTTGCTACGAATTTAATC
ATTTGGAACCAATACCTGTGTCCCATCCCATGCAAGTAAATATTGCATTT
AGTACTCGCACGGTCAGTTTTAACATTCTCTTTTTCTAACATTTTTACCT
TCAGGTCACACAGTTTGAACAACAACAAACCAAACATGAACATCAAAGTT
GAGCCACCAGACCACATGAGGGGGCCGTCCCCTTCTATTCACAACTTTCA
ATCTCCTAATCCATTTCATCATACTGCGCCACCATCGCACCATAAAGACT
TTAGTGACCAGAATAATATGATGTCACTTGGTGGTGGTGGGCCTATGTCT
AAGAGACAGCGTATAGAAGGCCATAATGATGGATGGCAGTAGCCCAGTTT
AGACACTGTGTCAATGATAACGCAACATAATGCGGGTAAACCCACCATGC
TAGCCTGACAGATAGGCTATAATCACCATAATTGGGTGTAGTAGCGCCAT
AATGAGTTAAATTATGCTTTTCACACCTCGTTCAGAAAGATTGGATGGTT
TCTTTTTTGAGTAATAGTTGGTTGGTGTTTATTTTTGCTGCTGGAACGAA
AGTGTATTATTTTCCCTTGTTCCTGTATAAACTTTCTTAAGAAGGCATTC
AGTTAGTCTTTTTCATCATTTATAAACTCAACCTTGTTCATATACTAAAG
ACAGTTAATTGACTCATTTAAGGAAAAAAAAACTAAAATTTTCTTTCAAT
TTTTTAAAAATACTTTTCATTTCTTTTTCCAATATATTTTTTTGTTGTTT
TGTTCACTCGTATAATTATGTAAATAGTTTTTCTTAAAAAAGCCAAAATT
TAAGACAATGACAGTTTTTATTATTGAAATAAGGCGCTTTTTTAATATTT
GCAAGAAATTTTATTACGGATTACTAGTCAACTTTATCCAAATTATTTTT
GGGGGTATTTCAACAAGTTAGGTGTAACATAATCTTCCAAACTTTTTGTT
TCTGACAGTGACGAGCTACTCTCATGTACCTAATACTTCAATCGTAGAAA
TTTTAGCGAGACTAATTTTAGCGTATATTAGCGAGTCAGTAAAATCTTGA
TTTTTTTTGGATTTATTTTAGCGAATCACGATTTCGATTCGGCGTGTTTT
AGCGAGATTTATTTTAGCGAAAATAGGGAAAACTCGCTAAAACGCTAAAA
TTAGTCTCGCTAAAATTTCTACGATTACAGTAGCCGTCTCCCTCCCGCTA
ATTAATCTTTCGAAAATTTTCCACCCAGGACATTTTTATTGGAACCCCCT
CCCCCCGCTTATTAAGTTTTGAGGTTTTTTCCAACTTCCCCTCCCCCGGC
TATTAGGTACCCGAGAGTAACCCAATTCATGCAATCTTTAACTCACTCCT
CGGGCGAATGTCTTACTCCAAAAAATCTCACTTAAATTAAACAAAAAATG
CTTGGTTACGTCAATTTCGCATTCCCTGAGTTTAGCAGCTTGAGAAGATT
TGTTTATTTTATAATTTTTTCGTATATGGTTCAGAGATTTGCTGCAGTTT
GTTTTCTACTTTCAATGTATTTTTCTTAGCATGATGTAGTTTTGTTTAGT
CTTATTTTCAATTGCTTCATCTGATCTGAGTGCTTGAAATATGGATTGAA
TTCTTGCCTTTCATGAAAATCAGATCTTTCCTAGTTTAAGCCCACCTTAT
ATTTTATAAATTTTTTCTTTTGAATGGTAGTAGAATTTGTTTTGAAAATG
GAGTATGAAAGCTTGTATTCATGTAAATAGAACACACCCTCTCTCTGAAA
CATACGGTTTGGAAAAAGACAAAAAGAAGAAATGACAAAATATGACACTT
TCTTTTTCATTTTCATTTTTTTTCAGGATTTTGTGTCTAAATAACTATAC
AAACCTATCCGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006861XLOC_006861Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012194-exon-sc0000141-1575043694:128869..128993TCONS_00012194-exon-sc0000141-1575043694:128869..128993Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1575043694:126969..127169TCONS_00012194-exon-sc0000141-1575043694:126969..127169Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1575043694:122616..122819TCONS_00012194-exon-sc0000141-1575043694:122616..122819Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1575043694:121994..122044TCONS_00012194-exon-sc0000141-1575043694:121994..122044Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1575043694:121369..121452TCONS_00012194-exon-sc0000141-1575043694:121369..121452Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1575043694:120861..120999TCONS_00012194-exon-sc0000141-1575043694:120861..120999Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1575043694:120293..120713TCONS_00012194-exon-sc0000141-1575043694:120293..120713Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1575043694:118380..120139TCONS_00012194-exon-sc0000141-1575043694:118380..120139Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1510915933:128869..128993TCONS_00012194-exon-sc0000141-1510915933:128869..128993Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1510915933:126969..127169TCONS_00012194-exon-sc0000141-1510915933:126969..127169Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1510915933:122616..122819TCONS_00012194-exon-sc0000141-1510915933:122616..122819Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1510915933:121994..122044TCONS_00012194-exon-sc0000141-1510915933:121994..122044Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1510915933:121369..121452TCONS_00012194-exon-sc0000141-1510915933:121369..121452Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1510915933:120861..120999TCONS_00012194-exon-sc0000141-1510915933:120861..120999Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1510915933:120293..120713TCONS_00012194-exon-sc0000141-1510915933:120293..120713Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1510915933:118380..120139TCONS_00012194-exon-sc0000141-1510915933:118380..120139Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1491911889:128869..128993TCONS_00012194-exon-sc0000141-1491911889:128869..128993Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1491911889:126969..127169TCONS_00012194-exon-sc0000141-1491911889:126969..127169Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1491911889:122616..122819TCONS_00012194-exon-sc0000141-1491911889:122616..122819Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1491911889:121994..122044TCONS_00012194-exon-sc0000141-1491911889:121994..122044Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1491911889:121369..121452TCONS_00012194-exon-sc0000141-1491911889:121369..121452Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1491911889:120861..120999TCONS_00012194-exon-sc0000141-1491911889:120861..120999Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1491911889:120293..120713TCONS_00012194-exon-sc0000141-1491911889:120293..120713Clytia hemisphaericaexon
TCONS_00012194-exon-sc0000141-1491911889:118380..120139TCONS_00012194-exon-sc0000141-1491911889:118380..120139Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000141supercontigsc0000141:118380..128993 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.92966	9.71491	4.08373	3.2112	50.3183	36.5811	24.5801	44.4737	19.3561	26.0733	29.5729	25.6959	86.3059	87.5701	68.5656	82.2458	55.3875	79.2174	52.3594	48.6338	33.2478	33.2877	55.6605	52.7062	44.5879	50.1826	43.8773	36.2069	66.4715	76.5881
Blast
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BLAST of TCONS_00012194 vs. Swiss-Prot (Human)
Match: MEF2A (Myocyte-specific enhancer factor 2A OS=Homo sapiens GN=MEF2A PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 3.218e-64
Identity = 104/127 (81.89%), Postives = 117/127 (92.13%), Query Frame = 3 
Query:  273 MGRKKIQISRINDERNRQVTFTKRKFGLMKKAYELSILCDCEIALIIFNSSNKLFQYASTDMDKILLKYTEYNEPHESRTNADIHETISRKENKNCGSPD-DDSFVLTPRTEMKYQKINEEFEIMMK 650
            MGRKKIQI+RI DERNRQVTFTKRKFGLMKKAYELS+LCDCEIALIIFNSSNKLFQYASTDMDK+LLKYTEYNEPHESRTN+DI E +++KE++ C SPD D S+VLTP TE KY+KINEEF+ MM+
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINEEFDNMMR 127
The following BLAST results are available for this feature:
BLAST of TCONS_00012194 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEF2A3.218e-6481.89Myocyte-specific enhancer factor 2A OS=Homo sapien... [more]
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