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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012107 ID=TCONS_00012107|Name=TCONS_00012107|organism=Clytia hemisphaerica|type=transcript|length=741bp
TCttgacaaaacatatttttatatttcgtaaaattgctaaaatatataaa
aaaggttGAAGTAATAAGTTATAAAAGTAGTTAAAAAAGTCTTTCAACGA
AGGCTTAGATGAAAGgaatttttaaattataaatatttcagaaaacaaga
ataaatataaataaaattcaaatcttGATATATAATAGTCTAAATAAATA
CTTATTAAAAACACCTCATAAAATCTAActtctataaaaatatttccaaa
atgttaaaatttaatatataaaaaatttgaaatctttcacTTTTTACCGA
GAGCATAATTCAATCCACTAAGTCCTTTATTGCTATTGCTTTTCAATGAA
GAAGAGCTTGAGAATGCGTAGTTATTTGCGCTTCCCATGGGTTTCTTTGA
ACTTGTCACCAACGATGATTTCGGATTGCTTTTGGATTCACTGACGGTTT
TGTTTAAGCTACCACTGCCATTTCCTGTTGATAAAGGCATCTTTACTTTC
GATCTTTCAGATACTTCTTGGTCGATGAGAACGATTGAATCGAGTTTAAT
CGATTTTGTTGGTCTGCACGGTTGTTCCTTCTCTAGAGACAAATTGACAA
ATCTCAGCAATTTCTTCTTTAATGATTTCTtcgaattttcttctttaaac
aaacactttgaaaattgtttgtgtAAAGTTTACACTGCTTTGCTTGCTCC
TTTGCTTTTCGTTCTCGGTGCTCGGTGCTCGGTGCTCGTTA Run BLAST on NCBI transcript from alignment at sc0000137:11629..12425- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012107 ID=TCONS_00012107|Name=TCONS_00012107|organism=Clytia hemisphaerica|type=transcript|length=797bp|location=Sequence derived from alignment at sc0000137:11629..12425- (Clytia hemisphaerica)
TCTTGACAAAACATATTTTTATATTTCGTAAAATTGCTAAAATATATAAA
AAAGGTTGAAGTAATAAGTTATAAAAGTAGTTAAAAAAGTCTTTCAACGA
AGGCTTAATGAAAGGAACNATAAGTTATAAAAGTAGTTAAAAAAGTCTTT
CAATGAAGGCTTAGATGAAAGGAATTTTTAAATTATAAATATTTCAGAAA
ACAAGAATAAATATAAATAAAATTCAAATCTTGATATATAATAGTCTAAA
TAAATACTTATTAAAAACACCTCATAAAATCTAACTTCTATAAAAATATT
TCCAAAATGTTAAAATTTAATATATAAAAAATTTGAAATCTTTCACTTTT
TACCGAGAGCATAATTCAATCCACTAAGTCCTTTATTGCTATTGCTTTTC
AATGAAGAAGAGCTTGAGAATGCGTAGTTATTTGCGCTTCCCATGGGTTT
CTTTGAACTTGTCACCAACGATGATTTCGGATTGCTTTTGGATTCACTGA
CGGTTTTGTTTAAGCTACCACTGCCATTTCCTGTTGATAAAGGCATCTTT
ACTTTCGATCTTTCAGATACTTCTTGGTCGATGAGAACGATTGAATCGAG
TTTAATCGATTTTGTTGGTCTGCACGGTTGTTCCTTCTCTAGAGACAAAT
TGACAAATCTCAGCAATTTCTTCTTTAATGATTTCTTCGAATTTTCTTCT
TTAAACAAACACTTTGAAAATTGTTTGTGTAAAGTTTACACTGCTTTGCT
TGCTCCTTTGCTTTTCGTTCTCGGTGCTCGGTGCTCGGTGCTCGTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012107-exon-sc0000137-1575043694:12324..12425 | TCONS_00012107-exon-sc0000137-1575043694:12324..12425 | Clytia hemisphaerica | exon |
| TCONS_00012107-exon-sc0000137-1575043694:11629..12267 | TCONS_00012107-exon-sc0000137-1575043694:11629..12267 | Clytia hemisphaerica | exon |
| TCONS_00012107-exon-sc0000137-1510915933:12324..12425 | TCONS_00012107-exon-sc0000137-1510915933:12324..12425 | Clytia hemisphaerica | exon |
| TCONS_00012107-exon-sc0000137-1510915933:11629..12267 | TCONS_00012107-exon-sc0000137-1510915933:11629..12267 | Clytia hemisphaerica | exon |
| TCONS_00012107-exon-sc0000137-1491911889:12324..12425 | TCONS_00012107-exon-sc0000137-1491911889:12324..12425 | Clytia hemisphaerica | exon |
| TCONS_00012107-exon-sc0000137-1491911889:11629..12267 | TCONS_00012107-exon-sc0000137-1491911889:11629..12267 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000137 | supercontig | sc0000137:11629..12425 - |
Blast
The following BLAST results are available for this feature:
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