TCONS_00012036 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012036
Unique NameTCONS_00012036
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1367

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012036 ID=TCONS_00012036|Name=TCONS_00012036|organism=Clytia hemisphaerica|type=transcript|length=1367bp
AGATTTCATTGACCACTTCGGCCTTCAAGATACTTTCAAAAGTTTACAAG
ACCAAGCAGACTGCATCAGAATCAAGAACTTCAAACATGAACCAAAAACC
AAAGAACCAAACTCCAACATCGAGGTTCTTAGTACACCGAGAGGGGCATC
GAATTCAAGAAAAACATCCCCGAGGAGTCCTACACCAAGTGCACCAAAGA
TGTCAAATCAAAATAGAACATTACCAGACAAACAAGCAACTGCAAATGAC
GAAGATTCGACTTTAGACAACACTGACTCCTCTCCTAGAAACAAATCTCC
AAACCCGTCATCAACGTATGTACCCTTGACACCAAGTAGAACCCTTCCTC
CAAGAACTCCTACCCCAAACAGGACATCGCCCCGTACCCCTGAAACTCCG
AGTGGTACAATATCTCCTAGAAGTCCAAGCCCAAACCCCTCTTTATCGCG
TGGAAAGCAAACACATGAAGACTTACCTCAAAGAAGCGCAACTCCAAATG
GAGCCTCACCTCGAGAAGACCATATTAAATCCAGCAAGAAAATGCCAGGA
AGTTCTTCACCGAATGGTGTTTCACCTCGAAATAAAGATATTGTCTCATC
AGGCAAGCCTCAGGTTAACGGTAATGATCGACCTGGTTTGAGTAGAGAGC
AATCTCTCTCAATCAATGAAACACGATCAAATGAACCGTCCCCAAGAAAG
GACCATTTGTTTTCACCGAGGAGTGACCGTTCAACCATCTCATCATCATC
AACACAGAAGAAGAAACCAACGATACCGATCATTCAACAAAATGGTGTCG
AAATTCATGACAGCGACGACGACGGTGAATTCGACGACGTTGACGGATCA
TGTAGTCATTTGTGAAAGAGCTGTACCGTAACCATCACAAATCTTTCGAG
GTTTGGCGTAAAAGCGAGATGAATAACTTGATATTACCAAACGATGGAAA
GGAAGAAACGCATTCGAAACTTTGGACCATCGATATCATATATTTTATGA
TCAGAACTGCAAATATCGTTACAGCACCAGGTAATGGTTGGCAAAATCCC
AAACCACCAGGAACTAATGAAGACGGAAGAGGGTATTGGTGTTGGGAAGC
AAGGAGGTTAAAGAACCACTTGCAACAGCAGGACGACGATCTTGACAACA
ATTTGTATGAAATGGCTGAAATAGTAATGGGATTGGATTATTATGATGGG
ATGGAGTTGTTGGAACAACTGAGAAGTGAACACTCTTTGGATGACGTAAT
CAAGATGACATCAAATATGGaacgatgaaaaagaaaatgagaacGCTAAT
TTGTAAATAATCACCAAATGAAAATGCAGGCATCTTTTTCCTTAAACAAA
AGTTTCTTCCATTCGTC
Run BLAST on NCBI

protein sequence of TCONS_00012036-protein

>TCONS_00012036-protein ID=TCONS_00012036-protein|Name=TCONS_00012036-protein|organism=Clytia hemisphaerica|type=polypeptide|length=287bp
DFIDHFGLQDTFKSLQDQADCIRIKNFKHEPKTKEPNSNIEVLSTPRGAS
NSRKTSPRSPTPSAPKMSNQNRTLPDKQATANDEDSTLDNTDSSPRNKSP
NPSSTYVPLTPSRTLPPRTPTPNRTSPRTPETPSGTISPRSPSPNPSLSR
GKQTHEDLPQRSATPNGASPREDHIKSSKKMPGSSSPNGVSPRNKDIVSS
GKPQVNGNDRPGLSREQSLSINETRSNEPSPRKDHLFSPRSDRSTISSSS
TQKKKPTIPIIQQNGVEIHDSDDDGEFDDVDGSCSHL
Run BLAST on NCBI

transcript from alignment at sc0000136:448136..458511+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012036 ID=TCONS_00012036|Name=TCONS_00012036|organism=Clytia hemisphaerica|type=transcript|length=10376bp|location=Sequence derived from alignment at sc0000136:448136..458511+ (Clytia hemisphaerica)
AGATTTCATTGACCACTTCGGCCTTCAAGATACTTTCAAAAGTTTACAAG ACCAAGCAGACTGCATCAGAATCAAGAACTTCAAACATGAACCAAAAACC AAAGAACCAAACTCCAACATCGAGGTTCTTAGTACACCGAGAGGGGCATC GAATTCAAGAAAAACATCCCCGAGGAGTCCTACACCAAGTGCACCAAAGA TGTCAAATCAAAATAGAACATTACCAGACAAACAAGCAACTGCAAATGAC GAAGATTCGACTTTAGACAACACTGACTCCTCTCCTAGAAACAAATCTCC AAACCCGTCATCAACGTATGTACCCTTGACACCAAGTAGAACCCTTCCTC CAAGAACTCCTACCCCAAACAGGACATCGCCCCGTACCCCTGAAACTCCG AGTGGTACAATATCTCCTAGAAGTCCAAGCCCAAACCCCTCTTTATCGCG TGGAAAGCAAACACATGAAGACTTACCTCAAAGAAGCGCAACTCCAAATG GAGCCTCACCTCGAGAAGACCATATTAAATCCAGCAAGAAAATGCCAGGA AGTTCTTCACCGAATGGTGTTTCACCTCGAAATAAAGATATTGTCTCATC AGGCAAGCCTCAGGTTAACGGTAATGATCGACCTGGTTTGAGTAGAGAGC AATCTCTCTCAATCAATGAAACACGATCAAATGAACCGTCCCCAAGAAAG GTAATTTATTCTTCTGAGTTGACCTCGATCATGGTCCTTTCTAACTTAAC ATTCTTGGTTCTGAATTTCTTATACAAAATTGCGACAGGTTTGAAAATGT ACATTACgaaggtatgaaaagaaaaatatcgaTTTATTTAGGTACATCGT GAAACCAGTCATATTCTATCATTTAtttaacacgtttttttataagaata ttccaaatttttgataccttcggatgttcttaatttttcgagtttcaggc ctttaaaaatgttcttaacttacttgttcttaatattgtTGCCAACGATT CCTCATgctcttgttcttataaagaaacgtcTACAGAAATTAACACATTC TTAGGACCATTTGTTTTCACCGAGGAGTGACCGTTCAACCATCTCATCAT CATCAACACAGAAGAAGAAACCAACGATACCGATCATTCAACAAAATGGT GTCGAAATTCATGACAGCGACGACGACGGTGAATTCGACGACGTTGACGG ATCATGTAGTCATTTGTGAGTTATGTATTCcactaggggctgagttaggt ctcgtatgcacatcggcgtatcgtcattttttgatcatgaaagtatagtc cttgaagagtcagaaaacgtgtgtggcgttatttggatcaggcacaaatt tctgttctttttattctaaaattaaaaactaCCCGCCTTTTAAAGAGCCg cccttttttgaaaagaaaagaggAGAGTGCCGGGGTACTTTTTTGTATAT CCTCATTAGAGTAAAAGGTGTTCGGAATTTCCCTTAGAGGAAATGTTATT TCTACCAAGGAACTTGTTTCTACGATACTTCGGAAATTCCACACTTTCGA GTAAGgtttactttaatcgtagaaactTTAGCGAGACTAAATTTaccgtt ttagcgagtttttcctatttttgctaaaataaaacacgccgaatcgacag atcgctaaaatttatccgcgcgaaatttctggttacattgccttgataca tttttatcaataggaagggtttcagtgcaaataaatgcttgaaaacgaat tcagtcaataatgcagtattcgctaaaatttatccatgcgaaattttttg agatcgtgattcgctaaaataaatccaaaaaaaatcaagattttcctgat tcgctaatatacgctaaaattagtctcgctaaaatttctacgattaaagt atatactgtattgttaactgaagtgacgagaaaacttgttcaagGAGACA TTGGAGTTAAataggttcgagttaaagagactcttcTGTATCATACTTGT ATTGTAAGGCGTGGTATGGGAAAGCATCTTGGTAAAACGTCTTAAGAGAA CACGACCCTTTGTTTGAGAAAATCTTATACAAATGATGCTCTATCATTCG ATAAGCTTTCacttttgataaaaatccattAGAGGACAATCTAAAAACCA caaaatattcataaaatttaccattaccATACTTGCAAATATGATATAAT TATAAAATTAATAGTTGATCTTTTCCAGCTTTATCCAGCCATCCATAGAC TGGGTCAAACGTTCGATAGCATTAGAATTTGTGCTGAAACCAGCTCTTCT TTCGGTCATGCATAACTCTCAAAATGGACTACCATTCCACCCTAATTTAC TCTATAAAAAGGTAAGTGTTGAAAATTAACTTTACCAAGAAGAATTTGCC TCACCTATTGTCGTGTGTAAATATGTccttattgcccccgcaggagcgta gcgacgaggaggcactcatagtttcacgcatagatattggactggaatct cgaaattttgttgcgtttgttttgtcgcccaagcatccccgtagatagtc tcttccgtaaatgttcggttttttccgggacggtagtatacatattttca tattcctattacgttatatgctattaccattactacatattacaatttta gttttgatttagctttgaaaagctcaagcgagtgttataaatgcaaatca taacagtgtatgatataacacgaattacaatattacttgtgcaaatcaaa acaaacaaaatggcagactggttatgatgatNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNcaattctttttccggaatctttaaagaaatttgctcaagt tttcaatatatttttgttcaaactctaatttatctttgtcttttatttta ttaataactaccgtgagattgggtaacttgcatcagtggaggctaacatg catagccctcaaatgaaagacctggctggtcattaaaatataacTACGTA gatccgctcgcagctctactctataccatttttgttttggtttaactttg tattttaatgaccatcaggtctttcatttgatgcaatgcatgttagcctc cactgatgcaagttacccaatctcacggtacctttattgtttatagagct tctcgagctttaaataccatcatatggtcgtaactcgagaaagtccttct taacttagtaaaacaagataccggcaaagtacaaaaaagttgaatgtatg catatgtaaatgttgtgaatgtcaatcaatgtaaacaaactttttctttt ggtcttcaaaatagatttaccttaCTTGCACTacatgcgcacattcaact ttttcatgcagttgtgatagcctaaataacttacgctccagtggtttggc gaaatagctccaattctggctttccaagttaggatggaccttcccgaagg catttaaacactggttagactaggtacacagacagtcatacagaaacacc ataaagtgaaagtatatatcGCTATAAACTCAAAAAGTCTAGCTTCCtga aggcacgtctcttcattgtctgcgctgcttggagaaaagattgcatcatg aaaaagtactatgcacttgaaaaaaaatttaggcgcattaccttgttgat ttattcaccactatatattttgcctacaatctaagatgtctgcggcatta tcagaaaaggtctatttagtgaataataatcatgatatatattgttgtaa gaaagaaactaaggagaaaaaaacaaacaggagatgtgaaaacctgtaag ctaatgataccataatttttgaaatatattgttgagaagcttttccagct tttccttagttttaatctttaaagcattaaaaagctttataagtgcatga catgatctttatgtgggggcatttagtgaaagctatgactagtatgTTAC ATTAAAGAAGATATTTTTGCGGGaaaaaaatttggcggatttggtcaaaa aatcccgctaaatttaattttttccgtcatccaccaaaattaaattcccg ccaaatttaagttgCTCTATTAATTCCCCTGAATGTGTGCCGCCAAAtta attccctctgaaaaaaattcttccgccatccgccaaattaaattcccgcc aaaatttcttccttttaatgTATGTTGACATTTGTGCTGATGTATGCCAT TAAGGCGTATTAGATAGATGCTCTCTAGAAGATACCTCATTACGTTTTGA CACGAGTATCAGAAAGATGTCTTAAATTTATTCTAATTCTAACACCTATA GGGTTTTAGGTTTTTGATAGCAAGGCTCccctttttcctttttgtagAAT CTAAAGGATTCTGCCTGAATAATGCATTGGGCTTCccccagaaaatgttc gtacatggggtgtggaggatatattgtccgggggtagtgaacAATCTACA AAGTTTGTCCCGGGTAAACTTGCTCAattttgggggtaattttgaatgtc caggcgGGTCAATTGATGCTCGTTCAGGGGTTAGACctgttatttttttc tggaagagaccattatattattttctggagatttgaaaaagaagatgatT TGAAGTAAATTCAAATTCGGGATCGAAGTTTTTTGTTCAAGAGCCTGCTC TCCAAATAACATAAAATAAATTCCTAAACATTCCGCGGtagtttatattt tttcttctcgGTAATCAGGTGAAAGAGCTGTACCGTAACCATCACAAATC TTTCGAGGTTTGGCGTAAAAGCGAGATGAATAACTTGATATTACCAAACG ATGGAAAGGAAGAAACGCATTCGAAACTTTGGACCATCGATATCATATAT TTTATGATCAGGTAAATTGTCTTCAGTTATGtggggaaagtagaaaatat tcTATTCTTGTAAAGATAAATCCTATCTTTGCTAATTGAACATAATAGTC ATTATCGGGGTTATTTATTTCTATTAGGCAATATCAGATATCTAATACGG TCCTAATACTGTgatgaaagaaaattctttaaaaaacatCTCCCAATATC TGGATCGATGCGTTAGTTTTATTTCACTGAGTTGTTTATACGCTTCATAT GGCCATGGCCATTCACTAGGTAAATCATAGGACTATTGTCTCGCACAACG ACTTTCTATAGCTAGCTCTCCATCCATACATATGCTTCGCATGATGGGAT GCTTTCAAACGTATATGTTTTTAGATTCACATAAGAGATTACGACAATGA agaataaatcttttttcttgcCACAGAACTGCAAATATCGTTACAGCACC AGGTAATGGTTGGCAAAATCCCAAACCACCAGGAACTAATGAAGACGGAA GAGGGTATTGGTGTTGGGAAGCAAGGTAGGATGTTGATATTTTGAAGGAT TTATTTCCGCGCGTTAAGGAATTATGAACGTTGCGATGGGCCCATTTTTT CGGCACGGAATTAATTTGtcgaaattttgttgaaatAAATCTGTTCGAAA ACTCTCCAAAATTAAACCACTTTAAAGACATTATTTATGTAACTAAGTTA CTACCATTTGCTGACAcagtatttttaaagaaaagaaagaacaactttTC CCCCCTTGGGCGCGTTTTTTGCTCTAGCCGCAGGTGAGCATTAAAATGGG TGTTGGGGGGGACGGCGTTAAGATTCCAAAAAAGTATTTCCCGATTCGGT TTCTATCGGATGTTCGGGAGAGCGGGAAATCCGCTGAAGAAAACNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTGTT TTTGATTACCATATTTTTAGTGTAAAAAGATAGCTGCAAGTGTAAATACT GGTATTAATTTATCTCACTTGCTAGTTATCACTAAAAGAACACTAAAAGA ACTGTGTTATATATCAGACAAGCACCCCAGAGGTTACATGCGAGCTCCTT GTAACCTCTTGCTAAGCTTACTAATCCTACTAATCCAACTAATCCTACTA ATCCTACTAAAGAAATTCAACGGTATCAACTTATCTAACTTGCACATCCT GCAAAATCGATCATTCTTTGTGAGTCAGTTTCACAACGACCACACCGCTA AAATCGTTTCCATCTTTTTGACAAGCATGCCTGCatataaagtttcaaaa actgtTTTGGGTTCTTTTAATCAAGCCAACAGAGAGATGTTTGGTGAAAC AGCCGGTACGCAATGTAGTGCTAACTGCCTCTACGCTATATTCTGGTCCA ATGTTAGACGTGTTTCTATTTGGAAAACTACTGACCTAGACAGAATTTTA ATTGAAGGAGACAAATTATACAAACAATTAAATACAAATAGTTATTTATC GGTAGATGAAATGCCACATTTCATTGAATCAAATGGTATTGTCACTGagc ttcattttttaaattctgaaaatggaCAAGCTAAATTGATCAATGACTAT ATCCTCTGCTTCAAATTCCTCTGAGCATGGCTCCGAATCCAGACTTTGAC GCATTGATGATCATTGAAGGTTTTACTATAGCAATTATGAGAAGGCCTCA AGgatttttcctttttgattCGTATAGTCGTAATGAATTTGGACTACTTG AACCACTTAATGGAAAGTCTTGTCTTATAAAGTTTGAAGAcatttttgaa cttgaaaaatatattcaacatttttatttaGAGGAAAATAACAAagataa tttatttttccttaTTCAATTCATCAAAGTAGGTGAACTAAAAGAAGATT TTAAAAAAGGTTCTTCAGCGAAGTTATTCTGGCTTTGTAAAGAAAAGTGC AATCAAGCGAAAAAATGATTCTGATAAtggaaatgttttaaaaaagcgTC AAAAGACACGCCAGGAAAGCAATCATAAATTTTatgagaaaaacaaagaa attctgAAAGAAAACCAAAATAATTATCGTGCATTAAAATAAAGCAAGCC AAAAAGTCCGCCGCGTCCAAagcaatgaaaaaataaaagacagCAATAAA ATCTACCGTAaccaaaacaaggaaaaaattaaaaaaagtaaaaaagcttA CCGCACCCAGAATAGTGacaaaattaaagaaaacaaaaaagcctATCGTG AACGAAACAAAGAAAAGCGAAAAGAAACAAATTCTCGACAGAAAGAGCGA ATAGCAAAATTTAAAACTCTCGTAAATGAAGGTCCTTTTTATATGTGTGT TTGTTGCAACCAATGTCTCTATCGACAAACTGTTGTCAAATATACACCTG AAAACTACAATATGCCAGAAGAAAACTTTTGTTCTGAAGTAATTTCATTT TATGGCCAATTGTATATTtgtaagacatgccataacaaACTTAAAAAAGA CAACTTACCATGCCAGTCTGTCAAAAACAAGCTCGATATTTATGAATTAC CAgctgaatttcatactcttcGCAGGCTTGAGAAAGTTTTAATTTCTCAa agaattttattcaaaaaaattgctATCATGCCAAAAGGTCAGTTTCCTAA GTTAAAAGGGTCCATTTGTAATGTACCCATCGACATAGAAGATATTGCAA AAACTTTACCAAGAAGAACAAACGATAATGGCTTGGTCATTGTCAAATTA AAAAGGAAACTAGAATATAAAGGACATGTCATTTTTGAACCTATTAGACC TGATTTCATTCAAAGTGTGTTGATTTATTTGAAAGATATCAATCCTCTCT ATCATGACATAGTGATCGATGTGAATAATATATCTGAGGACCGTATCATA GATGCCAATTCCGAAAGTACAGGTTCTTGTGAAGGcagtgaaaatgatga aattgacGATGACAAGGAAAGTGATAAACTCGATGGAACGCAAGACAATG CTTCAAAATTAGAGGAACTTGAGACAACTGCAAACCCTCTTGATGCATAT CGTTCTAGTGCGAATGAGACTACTCTTATGCCTCACACTCCCTCTGAAAC AGACATAGATAATGAAATTCTAACATTAGCCCCTGGTCAAGGGAAAAAGC CAATTTCCATTTTGAATGATGAGGATTGCGAAATGCTTGCTCACCCTCAT TTATTTCCTAAAGGTAAATTTGGATACAAAGTTGAACGAGATGTTAAACT TAGTCCCTCCAAGTATTTTAACCAGCGTCTTTTGAACTATACCCAAAAGT TTGCTTCCGACCCAGACTATATTTTTTTTGCCAGTTTTGTGATTCAACAA GTCTCTTTAACCAGTCAGATAAATGTTGCCATGAGAAAAGTTGCTGCTAA TAATTTGAATGCTGGTATgttaagtcaaaatttcaaagaaactgTGAAAC AATTTATCGCAAATGACAAAGCCTTTGCTTTTATGAGTACTGTCAAAGGA ACTCCAGCCTATTGGAAGAAATTTCAGCAAGAAGTTTTAGCAATGGTCAA ACAATTAGGACCACcaactttcttttttactttgagCTGCGCAGACCTAA GATGGAATGAATTGATTTCTATTATTTACAAACTCAAGGGTCAAGATGTC ACTGATGAATTCATTAAGAATCTTTCATATCATGAAAGATGTGATTTGTT GAATAGCAATCCTGTACTTGTAGCAAGGCATTTTCAATATAGAGTTGAAg tgttttttaaaacaatagtTTTGAACGGCCCACTTGGTAAAACAACTTTT TACGCTATTCGTGTTGAATTTCAAGTGCGTGGCAGCCCTCACATCCATTC TTTTCTTTGGATCTTAAATGCTCCTACATTAACTCAGGAAACTAAACATG AATACATTGAATTTGTTGATAAAATAATCAAGGTTTATTTACCATCGCAG CAAGAAGATCCTGAATTATTCAATTTAGTGAAAACCTATCAGTTACACCG ACATTCAAAAACATGTCGCAAGTACAAAAATACACCTTGCAGATTtcatt ttgggaaatttttttctgaaaaaacgaTAGTGTCAGAGCCCTTGCCACAA GAGTTACCACATGAGCAAAAAGAATCCATATTGACACTAAGAAAAGAATT ATTAGTCAAAGTAAAGACTTATATCAACGAGAACCTCAATCCAagtaaaa gaaacttttttgNAATCCCCTTTTTGCATTCCATTTCCGACCTGTTTATT TTATCTAATCCTTGCATCTTTCTCAGCTTACGGCtagagcttccagcgca gctggtttattgattctgctttgtcagcacaGCGCCTCCTttcaatacat gtttttttaaaagcattgcacttataagcatttCTAGGCTCAGGTATGGG GAAAATTAAGTATATGCTAAGCATTACCTCGAGCCTATAAAGTATAAGCT ACTTTGTAGTATGGATATAAGCAGTATTATAGTAGTATAGCAGTATATAA gcagtattaagtattaggatataagcatccctcaagcatttttcagcctt attaaactttcgacctaagcatctctgagcctgttttcggatttttatat gcttgtaaaaaaacatctaatatcataaaatatatttcataagATATTTT ATTCCCTTCCAGGAGGTTAAAGAACCACTTGCAACAGCAGGACGACGATC TTGACAACAATTTGTATGAAATGGCTGAAATAGTAATGGGATTGGATTAT TATGATGGGATGGAGTTGTTGGAACAACTGAGAAGTGAACACTCTTTGGA TGACGTAATCAAGATGACATCAAATATGGaacgatgaaaaagaaaatgag aacGCTAATTTGTAAATAATCACCAAATGAAAATGCAGGCATCTTTTTCC TTAAACAAAAGTTTCTTCCATTCGTC

Coding sequence (CDS) from alignment at sc0000136:448136..458511+

>TCONS_00012036 ID=TCONS_00012036|Name=TCONS_00012036|organism=Clytia hemisphaerica|type=CDS|length=2592bp|location=Sequence derived from alignment at sc0000136:448136..458511+ (Clytia hemisphaerica)
GATTTCATTGACCACTTCGGCCTTCAAGATACTTTCAAAAGTTTACAAGA
CCAAGCAGACTGCATCAGAATCAAGAACTTCAAACATGAACCAAAAACCA
AAGAACCAAACTCCAACATCGAGGTTCTTAGTACACCGAGAGGGGCATCG
AATTCAAGAAAAACATCCCCGAGGAGTCCTACACCAAGTGCACCAAAGAT
GTCAAATCAAAATAGAACATTACCAGACAAACAAGCAACTGCAAATGACG
AAGATTCGACTTTAGACAACACTGACTCCTCTCCTAGAAACAAATCTCCA
AACCCGTCATCAACGTATGTACCCTTGACACCAAGTAGAACCCTTCCTCC
AAGAACTCCTACCCCAAACAGGACATCGCCCCGTACCCCTGAAACTCCGA
GTGGTACAATATCTCCTAGAAGTCCAAGCCCAAACCCCTCTTTATCGCGT
GGAAAGCAAACACATGAAGACTTACCTCAAAGAAGCGCAACTCCAAATGG
AGCCTCACCTCGAGAAGACCATATTAAATCCAGCAAGAAAATGCCAGGAA
GTTCTTCACCGAATGGTGTTTCACCTCGAAATAAAGATATTGTCTCATCA
GGCAAGCCTCAGGTTAACGGTAATGATCGACCTGGTTTGAGTAGAGAGCA
ATCTCTCTCAATCAATGAAACACGATCAAATGAACCGTCCCCAAGAAAGG
ACCATTTGTTTTCACCGAGGAGTGACCGTTCAACCATCTCATCATCATCA
ACACAGAAGAAGAAACCAACGATACCGATCATTCAACAAAATGGTGTCGA
AATTCATGACAGCGACGACGACGGTGAATTCGACGACGTTGACGGATCAT
GTAGTCATTTGTGAGATTTCATTGACCACTTCGGCCTTCAAGATACTTTC
AAAAGTTTACAAGACCAAGCAGACTGCATCAGAATCAAGAACTTCAAACA
TGAACCAAAAACCAAAGAACCAAACTCCAACATCGAGGTTCTTAGTACAC
CGAGAGGGGCATCGAATTCAAGAAAAACATCCCCGAGGAGTCCTACACCA
AGTGCACCAAAGATGTCAAATCAAAATAGAACATTACCAGACAAACAAGC
AACTGCAAATGACGAAGATTCGACTTTAGACAACACTGACTCCTCTCCTA
GAAACAAATCTCCAAACCCGTCATCAACGTATGTACCCTTGACACCAAGT
AGAACCCTTCCTCCAAGAACTCCTACCCCAAACAGGACATCGCCCCGTAC
CCCTGAAACTCCGAGTGGTACAATATCTCCTAGAAGTCCAAGCCCAAACC
CCTCTTTATCGCGTGGAAAGCAAACACATGAAGACTTACCTCAAAGAAGC
GCAACTCCAAATGGAGCCTCACCTCGAGAAGACCATATTAAATCCAGCAA
GAAAATGCCAGGAAGTTCTTCACCGAATGGTGTTTCACCTCGAAATAAAG
ATATTGTCTCATCAGGCAAGCCTCAGGTTAACGGTAATGATCGACCTGGT
TTGAGTAGAGAGCAATCTCTCTCAATCAATGAAACACGATCAAATGAACC
GTCCCCAAGAAAGGACCATTTGTTTTCACCGAGGAGTGACCGTTCAACCA
TCTCATCATCATCAACACAGAAGAAGAAACCAACGATACCGATCATTCAA
CAAAATGGTGTCGAAATTCATGACAGCGACGACGACGGTGAATTCGACGA
CGTTGACGGATCATGTAGTCATTTGTGAGATTTCATTGACCACTTCGGCC
TTCAAGATACTTTCAAAAGTTTACAAGACCAAGCAGACTGCATCAGAATC
AAGAACTTCAAACATGAACCAAAAACCAAAGAACCAAACTCCAACATCGA
GGTTCTTAGTACACCGAGAGGGGCATCGAATTCAAGAAAAACATCCCCGA
GGAGTCCTACACCAAGTGCACCAAAGATGTCAAATCAAAATAGAACATTA
CCAGACAAACAAGCAACTGCAAATGACGAAGATTCGACTTTAGACAACAC
TGACTCCTCTCCTAGAAACAAATCTCCAAACCCGTCATCAACGTATGTAC
CCTTGACACCAAGTAGAACCCTTCCTCCAAGAACTCCTACCCCAAACAGG
ACATCGCCCCGTACCCCTGAAACTCCGAGTGGTACAATATCTCCTAGAAG
TCCAAGCCCAAACCCCTCTTTATCGCGTGGAAAGCAAACACATGAAGACT
TACCTCAAAGAAGCGCAACTCCAAATGGAGCCTCACCTCGAGAAGACCAT
ATTAAATCCAGCAAGAAAATGCCAGGAAGTTCTTCACCGAATGGTGTTTC
ACCTCGAAATAAAGATATTGTCTCATCAGGCAAGCCTCAGGTTAACGGTA
ATGATCGACCTGGTTTGAGTAGAGAGCAATCTCTCTCAATCAATGAAACA
CGATCAAATGAACCGTCCCCAAGAAAGGACCATTTGTTTTCACCGAGGAG
TGACCGTTCAACCATCTCATCATCATCAACACAGAAGAAGAAACCAACGA
TACCGATCATTCAACAAAATGGTGTCGAAATTCATGACAGCGACGACGAC
GGTGAATTCGACGACGTTGACGGATCATGTAGTCATTTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006765XLOC_006765Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012036-proteinTCONS_00012036-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012036-exon-sc0000136-1491911889:448136..448835TCONS_00012036-exon-sc0000136-1491911889:448136..448835Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1510915933:448136..448835TCONS_00012036-exon-sc0000136-1510915933:448136..448835Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1575043694:448136..448835TCONS_00012036-exon-sc0000136-1575043694:448136..448835Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1491911889:449190..449350TCONS_00012036-exon-sc0000136-1491911889:449190..449350Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1510915933:449190..449350TCONS_00012036-exon-sc0000136-1510915933:449190..449350Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1575043694:449190..449350TCONS_00012036-exon-sc0000136-1575043694:449190..449350Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1491911889:453054..453196TCONS_00012036-exon-sc0000136-1491911889:453054..453196Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1510915933:453054..453196TCONS_00012036-exon-sc0000136-1510915933:453054..453196Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1575043694:453054..453196TCONS_00012036-exon-sc0000136-1575043694:453054..453196Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1491911889:453612..453710TCONS_00012036-exon-sc0000136-1491911889:453612..453710Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1510915933:453612..453710TCONS_00012036-exon-sc0000136-1510915933:453612..453710Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1575043694:453612..453710TCONS_00012036-exon-sc0000136-1575043694:453612..453710Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1491911889:458248..458511TCONS_00012036-exon-sc0000136-1491911889:458248..458511Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1510915933:458248..458511TCONS_00012036-exon-sc0000136-1510915933:458248..458511Clytia hemisphaericaexon
TCONS_00012036-exon-sc0000136-1575043694:458248..458511TCONS_00012036-exon-sc0000136-1575043694:458248..458511Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000136supercontigsc0000136:448136..458511 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.387735 0.425365 0.0693778 0.169688 0.537106 0.36154 0.615688 0.55313 0.617896 0.639577 0.60038 0.745755 3.98573 4.57328 1.96003 1.85114 0.727678 0.708554 4.1999 2.6594 0.468605 0.411424 0.852314 0.808356 1.62818 2.41496 0.465204 1.13481 0.74866 1.21848
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012036 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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