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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011912 ID=TCONS_00011912|Name=TCONS_00011912|organism=Clytia hemisphaerica|type=transcript|length=880bp
gcCATATTTAATCCATGCCAAAGATTCTTAAGGTAATATTACCACTTAAG
GTAATAGCCGGTGGTATGTGATAAAAAATCCCAAAACTTACCTAGTAGGA
ATAAGaattatgaaattgtcaatatattttctttttcagttacaaaaata
ctaaaatatctCACACGGGACCACGGGACGAAACGACGTAAACAATTGAA
AGAATACTCAAAGCAATGAAACAACACGAACACCCTCGCGCCATCCAGGA
ATATTATGCTAATGGCAGCTTAAAAATGAGAACaataTTGCTTGACTTAA
AGACGAAAGGCCCAAAGAACCGTCCGTGACAGACAAATATTATCGTCAAG
CTGTGAAGTAAAAATTGATGATAGTGTTACCTAATTGTAATTTATCGAAA
GTGTACGTAAGGTATAAAAGCTAAAAGAATAAAAGTATATCTggctaaaa
aatataaaagccaTGGATCATTTTACAATTAGaaatatctttgttttctt
ttcgtttttcttctaGCGCCGGACTTGATTTCTAAATagagaaaaataca
atatatAGAGTCACTCTAAAAGCACCCCGTGCTCATCACAGTAAACagct
ccactggaaaatttaaccaaatttcatttcatggaaaattaacttttaat
ttaattaaatcttaatttgaaattcaatagatTTATATCCCCcgttggga
tttcgatagaaatttgtCCCGAATCCCCACTTCCACCGGGATCTGTGAGA
CAGGGTGCTCAAAAGTACATATATCGTAGAAAAAACTATGACGTATAGCG
AATAGGCCACAGGGTGAGGTATAAAATTGAATGGGGATTAAACATATTTC
TCGTTTTGATGGCAGTATAACTTTGACAGT Run BLAST on NCBI transcript from alignment at sc0000134:20726..22069+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011912 ID=TCONS_00011912|Name=TCONS_00011912|organism=Clytia hemisphaerica|type=transcript|length=1344bp|location=Sequence derived from alignment at sc0000134:20726..22069+ (Clytia hemisphaerica)
gcCATATTTAATCCATGCCAAAGATTCTTAAGGTAATATTACCACTTAAG
GTAATAGCCGGTGGTATGTGATAAAAAATCCCAAAACTTACCTAGTAGGA
ATAAGaattatgaaattgtcaatatattttctttttcagttacaaaaata
ctaaaatatctCACACGGGACCACGGGACGAAACGACGTAAACAATTGAA
AGAATACTCAAAGCAATGAAACAACACGAACACCCTCGCGCCATCCAGGA
ATATTATGCTAATGGCAGCTTAAAAATGAGAACGTAAGTGATTATACATC
TTGACTTGTTCCATAcccacaaaccaaattcttGCAAATATATTAAAGGG
TAAACTTCTGTGCTTCAATGCCTCAGAGTGTTTGTGCCCGTTCCCCGTTT
ATTGATTGTCGAATTTAAAGCAGAAGAAAAATTTCCGGGTATAAGTTANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAGTAATTCAGACTGGATCTCTGTACTATTATCGTAAAATCTAAATCCAC
TAAAAACAGACCTTTGTTCTATTGGTTTTTATGTTCTTTTATGTCCCTTT
CCTAACAGGCTAATAAACGACTCGGACTTTTTGAGACAGGGACGTTCCCC
TCGCACAAATGAAACATGTATACCAACGCTtccattttttttctcagaat
aTTGCTTGACTTAAAGACGAAAGGCCCAAAGAACCGTCCGTGACAGACAA
ATATTATCGTCAAGCTGTGAAGTAAAAATTGATGATAGTGTTACCTAATT
GTAATTTATCGAAAGTGTACGTAAGGTATAAAAGCTAAAAGAATAAAAGT
ATATCTggctaaaaaatataaaagccaTGGATCATTTTACAATTAGaaat
atctttgttttcttttcgtttttcttctaGCGCCGGACTTGATTTCTAAA
TagagaaaaatacaatatatAGAGTCACTCTAAAAGCACCCCGTGCTCAT
CACAGTAAACagctccactggaaaatttaaccaaatttcatttcatggaa
aattaacttttaatttaattaaatcttaatttgaaattcaatagatTTAT
ATCCCCcgttgggatttcgatagaaatttgtCCCGAATCCCCACTTCCAC
CGGGATCTGTGAGACAGGGTGCTCAAAAGTACATATATCGTAGAAAAAAC
TATGACGTATAGCGAATAGGCCACAGGGTGAGGTATAAAATTGAATGGGG
ATTAAACATATTTCTCGTTTTGATGGCAGTATAACTTTGACAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011912-exon-sc0000134-1491911889:20726..21008 | TCONS_00011912-exon-sc0000134-1491911889:20726..21008 | Clytia hemisphaerica | exon |
| TCONS_00011912-exon-sc0000134-1510915933:20726..21008 | TCONS_00011912-exon-sc0000134-1510915933:20726..21008 | Clytia hemisphaerica | exon |
| TCONS_00011912-exon-sc0000134-1575043694:20726..21008 | TCONS_00011912-exon-sc0000134-1575043694:20726..21008 | Clytia hemisphaerica | exon |
| TCONS_00011912-exon-sc0000134-1491911889:21473..22069 | TCONS_00011912-exon-sc0000134-1491911889:21473..22069 | Clytia hemisphaerica | exon |
| TCONS_00011912-exon-sc0000134-1510915933:21473..22069 | TCONS_00011912-exon-sc0000134-1510915933:21473..22069 | Clytia hemisphaerica | exon |
| TCONS_00011912-exon-sc0000134-1575043694:21473..22069 | TCONS_00011912-exon-sc0000134-1575043694:21473..22069 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000134 | supercontig | sc0000134:20726..22069 + |
Blast
The following BLAST results are available for this feature:
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