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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011881 ID=TCONS_00011881|Name=TCONS_00011881|organism=Clytia hemisphaerica|type=transcript|length=731bp
atctttccaatgataccaaatttataaagattgaagaattccttcaaaag
ttataggtaaatgaaaaaagagtgcacacttatcgtgaatagactttaga
tgaATTCAAATTTGTGGAATGAATCAAACAGATATTTCAGGTACAAATGA
ATTATATACAAGTAATTAATTACATTGAGTTTACAACAAAGGTTTAAGAT
AAAGTaacaaaaaatgtttgttttgagTTCAAAAACAATATAATGTTATA
CCAACAACAAGAAGAATGTTGCTGCAAAAAAAACATGCCAAAACTAGAGC
ATGCATTTATTATACATATCAAATAGTCAGAAACCTTattaaaacataaa
caaatgcTCGACTTTAAtttgttttctcaaaacaaatatttggcAGTAGC
AAGACCAACCATTCCAACCAGCGTTACACTTTGGGTGATAACTGTTGCCG
GGTTTTTCTTGTTTGTTTCATGTTCGGGTTCATTTTCTGGTTCCCCGTTC
GCCCGTCGGTAACGTCCGGCGTAATCGGGTTCTTCTTCCGGTTTAGGTTC
TTGTACGACACTACCGTTTACGTAAAGGGTAGCAACGGCAATTAACGCCA
ATAAACATAGAGTGAATTTCTGCATCTTCTTTGATTGGTTTGTTTGTTGT
GATGAGAGATGAATTTCAAATCTGGATGAATGTCCCTAGTCTGGTCCTGA
AATGAGAAAGATTTCACAAATCAAataattt Run BLAST on NCBI transcript from alignment at sc0000133:456533..457326- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011881 ID=TCONS_00011881|Name=TCONS_00011881|organism=Clytia hemisphaerica|type=transcript|length=794bp|location=Sequence derived from alignment at sc0000133:456533..457326- (Clytia hemisphaerica)
ATCTTTCCAATGATACCAAATTTATAAAGATTGAAGAATTCCTTCAAAAG
TTATAGGTAAATGAAAAAAGAGTGCACACTTATCGTGAATAGACTTTAGA
TGAATTCAAATTTGTGGAATGAATCAAACAGATATTTCAGGTACAAATGA
ATTATATACAAGTAATTAATTACATTGAGTTTACAACAAAGGTTTAAGAT
AAAGTAACAAAAAATGTTTGTTTTGAGTTCAAAAACAATATAATGTTATA
CCAACAACAAGAAGAATGTTGCTGCAAAAAAAACATGCCAAAACTAGAGC
ATGCATTTATTATACATATCAAATAGTCAGAAACCTTATTAAAACATAAA
CAAATGCTCGACTTTAATTTGTTTTCTCAAAACAAATATTTGGCAGTAGC
AAGACCAACCATTCCAACCAGCGTTACACTTTGGGTGATAACTGTTGCCG
GGTTTTTCTTGTTTGTTTCATGTTCGGGTTCATTTTCTGGTTCCCCGTTC
GCCCGTCGGTAACGTCCGGCGTAATCGGGTTCTTCTTCCGGTTTAGGTTC
TTGTACGACACTNGCCCGTCGGTAACGCCCGGCGTAATCGGGTTCTTCTT
CCGGTTTAGGTTCTTGTACGACACTACCGTTTACGTAAAGGGTAGCAACG
GCAATTAACGCCAATAAACATAGAGTGAATTTCTGCATCTTCTTTGATTG
GTTTGTTTGTTGTGATGAGAGATGAATTTCAAATCTGGATGAATGTCCCT
AGTCTGGTCCTGAAATGAGAAAGATTTCACAAATCAAATAATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011881-exon-sc0000133-1575043694:456781..457326 | TCONS_00011881-exon-sc0000133-1575043694:456781..457326 | Clytia hemisphaerica | exon |
| TCONS_00011881-exon-sc0000133-1575043694:456533..456717 | TCONS_00011881-exon-sc0000133-1575043694:456533..456717 | Clytia hemisphaerica | exon |
| TCONS_00011881-exon-sc0000133-1510915933:456781..457326 | TCONS_00011881-exon-sc0000133-1510915933:456781..457326 | Clytia hemisphaerica | exon |
| TCONS_00011881-exon-sc0000133-1510915933:456533..456717 | TCONS_00011881-exon-sc0000133-1510915933:456533..456717 | Clytia hemisphaerica | exon |
| TCONS_00011881-exon-sc0000133-1491911889:456781..457326 | TCONS_00011881-exon-sc0000133-1491911889:456781..457326 | Clytia hemisphaerica | exon |
| TCONS_00011881-exon-sc0000133-1491911889:456533..456717 | TCONS_00011881-exon-sc0000133-1491911889:456533..456717 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133 | supercontig | sc0000133:456533..457326 - |
Blast
The following BLAST results are available for this feature:
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