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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011590 ID=TCONS_00011590|Name=TCONS_00011590|organism=Clytia hemisphaerica|type=transcript|length=410bp
ATCACGTGCTTCAAAATGTCGTTCAAGTGGACACAACCATTCCTGGTAAC
TTCATGTTCACCAACAAGAAAACGAGTTGGACTTTGGGATCCATCATTAA
AGACAAAGATCAATTATCAGCCGCTTTGTACGAAACTGTCCGCGGAATGT
CCGAGAAATCATACATCATTTTGATGGTTATCATGGGTGTGTTTCTGGTG
GTCGTGATCGCTTATTTTGTTGTGTCCTGCAAAAAGAGGGACGTCTACGA
CCCTGTTTAAGAAACGATTAGTTAGCTTAATTATTTTTATAGTCATTCAT
GGGTATGGGGGTTAGGTTATATTTCCACcaatattttacttttacttttg
tACAAGGCTTTATAAATATGTTCAGTTAGACTTTTAATATAACTAGAACT
TGGAATAACT Run BLAST on NCBI transcript from alignment at sc0000130:490335..491302- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011590 ID=TCONS_00011590|Name=TCONS_00011590|organism=Clytia hemisphaerica|type=transcript|length=968bp|location=Sequence derived from alignment at sc0000130:490335..491302- (Clytia hemisphaerica)
ATCACGTGCTTCAAAATGTCGTTCAAGTGGACACAACCATTCCTGGTAAC
TTCATGTTCACCAACAAGGTAACAAAGTCTCAATCATTTTCCTTTTTACG
TGATAAGATCTTAAAGATCTGTACCTAATGCTCTTAAAGATATGTTCCAA
ATAATAACAATATCCTACAGAAATTTCATCCCTAGAAGGTATTTTGGTTA
TAATTCCAATGGACCTTGTGAAACAACAATAATCAACAAAATTTGAAAAA
CTTGCACTAAAATCAGTTTTCTTCATTGGCATTAAGTTTTGTCCTGCACC
TATGGCAACTGCTAGGAAAAAAGTCAACTAGTCAGTGAGACGGGGGTCTC
ACACACTATCAATTCAATCTATGCACCTCAATATTTAAAGCTCATCACCA
TCAGAGCTAGAACTATTTAGATTGTTCATCAGATGTCATTTTTTGACCGG
ATATGTTTAAATTCACGTAAAGTAAATTTTGTCATTAATAGGGCCGTCTT
TCAAGAACAATTTTCTTTTTCCTATTTACATTGAGATATGGCTATCCTAA
TGGCTATGGCTATCCAGAAATCCTAATCTTTGCTTCTCATTCCTGAGCTG
ATCCTTTCCATTGCTTCCTTATACAGAAAACGAGTTGGACTTTGGGATCC
ATCATTAAAGACAAAGATCAATTATCAGCCGCTTTGTACGAAACTGTCCG
CGGAATGTCCGAGAAATCATACATCATTTTGATGGTTATCATGGGTGTGT
TTCTGGTGGTCGTGATCGCTTATTTTGTTGTGTCCTGCAAAAAGAGGGAC
GTCTACGACCCTGTTTAAGAAACGATTAGTTAGCTTAATTATTTTTATAG
TCATTCATGGGTATGGGGGTTAGGTTATATTTCCACCAATATTTTACTTT
TACTTTTGTACAAGGCTTTATAAATATGTTCAGTTAGACTTTTAATATAA
CTAGAACTTGGAATAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011590-exon-sc0000130-1575043694:491235..491302 | TCONS_00011590-exon-sc0000130-1575043694:491235..491302 | Clytia hemisphaerica | exon |
| TCONS_00011590-exon-sc0000130-1575043694:490335..490676 | TCONS_00011590-exon-sc0000130-1575043694:490335..490676 | Clytia hemisphaerica | exon |
| TCONS_00011590-exon-sc0000130-1510915933:491235..491302 | TCONS_00011590-exon-sc0000130-1510915933:491235..491302 | Clytia hemisphaerica | exon |
| TCONS_00011590-exon-sc0000130-1510915933:490335..490676 | TCONS_00011590-exon-sc0000130-1510915933:490335..490676 | Clytia hemisphaerica | exon |
| TCONS_00011590-exon-sc0000130-1491911889:491235..491302 | TCONS_00011590-exon-sc0000130-1491911889:491235..491302 | Clytia hemisphaerica | exon |
| TCONS_00011590-exon-sc0000130-1491911889:490335..490676 | TCONS_00011590-exon-sc0000130-1491911889:490335..490676 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000130 | supercontig | sc0000130:490335..491302 - |
Blast
The following BLAST results are available for this feature:
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