TCONS_00011304 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00011304
Unique Name	TCONS_00011304
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1748

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000124:346060..353494-
coding sequence from alignment at sc0000124:346060..353494-

transcript sequence

>TCONS_00011304 ID=TCONS_00011304|Name=TCONS_00011304|organism=Clytia hemisphaerica|type=transcript|length=1748bp
GTTCGCTTTAGACAGGTTCTACTGTAATTTCTTTCGTTAAAGCAATAAAA
CATCTCAAAATATATAATTGTACATGATGGTGATCAGTTTTACCTGCATC
GCTATCGTTGGTTTGATTTTTGTGCATCCAACCTATGGCCAAGGACCATG
TGGCGGACGATTATGCTTGGAATATACAAGTGGAGTTATCAAAGAAACTG
AGGATGGAGGTTATAACTTCTTGCAAACTAAAGGTTACGATTTCATGATC
GAATTCAGTTTCACGACATTCAACTCACGTGAAGAGCTTGTAGAGATGGT
GGTGAAGCACAATGAAGATATTTTGATTTCTGGAGATAGAAAACGTTTTC
GAAGTCTTTATTCTAATCTCAAATCGACGACAGGAAGATATGGTTCATAC
CTAACTATAGATGGCACGTTTGTTTTCCTGTTGCTGAATATGAATGACAA
ATACGCTGAAGGGATCTACACCATCACAGCTTTCTACAAAACAAAATTCT
CGAAGAAAGGGGATGAGCATTTTGAACAAATGAGATTTAGTTTTGGCATT
AAAgTAAACGGCGGATATACCCCATGGACGAATTTTGGTAAATGTAGCAA
AGAATGTGATGTTGGACAAATGCGAAGAAGTAGAGAATGTACGAATCCAG
AACCAAAGTTTGGTGGTCTTGATTGCCGACATCTTGGACCAAAAGCCGAT
CGTTTTCCTTGCTTCAATGTTCCGTGTAGCAATTTGCAAATAGAAAAAGA
TCCCGTATTGGAAAACTTCAGTATTAAATCGAAGAAGAAACGTGACATTT
CACTTTTGAGTATGTTGGAATTTGGATTCCATTGTTTTATTACGCCATCG
GAGAATGTAAACGACGAAACAAGGATGTCATTGGCCATTCCTGCAAAGAT
CTACAGTGTATCGGATGGCGATTCAAGGGCTTTATTACAAATGATCCATA
TTATTACAAGACGAAGCTTTCAGATTTATCTCCATTGTAGTTTAGCTCCC
TGTTCAACTCAAAAGTGTGAGAATGGTTCGTTTATTACAAAGCAGATTGC
TAAAGGAAATATTGGTGTCAGTGATATGCGTCTATCGGTTGGTATTGACG
GTTAATAAATGTAACAAAGCGAGGTGAAGCAAACAAAAGAGATGAATGAA
Acactcctgtgtcacagacccgctgggagcccagccccactggaaaattt
cgcaaaaatttcgtccccggtgggaaaatacccttacatttcagccccac
tgagaaattgactttcatttcaccctcattcgaaattcaatgtttaaaaa
ttccaCCCCAAACCCagcatccccactggattttttaattttggaataac
agaatttctatcctcattgggatttcaatactgaggaaaaaagttccacc
ggggctgtgagacaggggtgtaataaaattgatatttcattatttcataT
TTGAATATCCCTGCAATCTAGGTTTTTTAGACAGTTTTTCGATCGTTTTA
AGTGGGTCCACTGCAGGTGGGTTTAGCTTTTTTATCGTAGCTAATCTTAG
GAAGGGGAAAGCATTCGAACTAGATATCCTGGTTTGTGATGCTACTGCCT
TTAGGAAAGGCAAATTTAATTTGCTGTTTTACGGGTcaagctacccaaaa
agagggtcggacggcgaaaaaaattgaaacaaaaagtaGAATTAAAGCTA
TAAAATCTCCCAAAAGACAGCAAAAACTACATCTTGACATAAatgcaa

Run BLAST on NCBI

protein sequence of TCONS_00011304-protein

>TCONS_00011304-protein ID=TCONS_00011304-protein|Name=TCONS_00011304-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp
MMVISFTCIAIVGLIFVHPTYGQGPCGGRLCLEYTSGVIKETEDGGYNFL
QTKGYDFMIEFSFTTFNSREELVEMVVKHNEDILISGDRKRFRSLYSNLK
STTGRYGSYLTIDGTFVFLLLNMNDKYAEGIYTITAFYKTKFSKKGDEHF
EQMRFSFGIKVNGGYTPWTNFGKCSKECDVGQMRRSRECTNPEPKFGGLD
CRHLGPKADRFPCFNVPCSNLQIEKDPVLENFSIKSKKKRDISLLSMLEF
GFHCFITPSENVNDETRMSLAIPAKIYSVSDGDSRALLQMIHIITRRSFQ
IYLHCSLAPCSTQKCENGSFITKQIAKGNIGVSDMRLSVGIDG

Run BLAST on NCBI

transcript from alignment at sc0000124:346060..353494-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00011304 ID=TCONS_00011304|Name=TCONS_00011304|organism=Clytia hemisphaerica|type=transcript|length=7435bp|location=Sequence derived from alignment at sc0000124:346060..353494- (Clytia hemisphaerica)
GTTCGCTTTAGACAGGTTCTACTGTAATTTCTTTCGTTAAAGCAATAAAA
CATCTCAAAATATATAATTGTACATGATGGTGATCAGTTTTACCTGCATC
GCTATCGTTGGTTTGATTTTTGTGCATCCAACCTATGGCCAAGGTAATAA
TCTCCTTTTAACACCCATGTCTCACATTTGGTCTTACTAATCTAGTGAGG
ATATATCATTTGCCTGTGGAAAGGAGTAAAAATCCAAAAGGGTGGGAAAT
GTTTCTCAAGGGCGGTCAGGGACCCTTTTACAGGTTTTTTTCAAAGCTGC
ATAAACTTTTTTCCATCTTTTTTTTTAACTTGCTTTTTCTTTTCTTTTTC
AAAAGCTGATTCATAATTTCGTCATAGATCCGTCTACCCAGATAGTACAT
AATGTCTCAAACTTGAAAAATTTGAGGAAATTATAAAAACTAAAAAATCC
TCCATTTTGAAGACGTTATGTGTTGAAAAATAGTATTAATTAAAGGGATT
AATTAAGCATCACTGATTAAGTAAAACTGTTTTATTTCCCTTAATTATAA
CCTCTTAATAAGATCAATACAGGGTTAATCGATCGAAATTCTTTTCGTCA
AAAAAAATCATAATCAAGAAGAAAATATATCCTATCAAGTTTGCAATTTT
ATTGAAAGTAAAATTCAAATTTTCGTCCTTTATTATCCTGGAGAAAAAAA
TTAAAAGCAATCGATTTCTGCAATATAATATTGGGAAAATTATAATATTG
GCAAGTTAAAATCATATTGAGACTGTAGGAATATAAACGTGATGTGTTTC
AAAATTTAGAGTTCAGGCGAGACGCATATATAGCACTCGAACGATACTCG
TGAGGCCGAACGCGACCTTTGGTATGCTCTTTTGAGCTACTTGGAGAGAT
TTTGAACTTGAAAAACTCCCGAACAAGACCTGAAAATGTCTGTGCGTGTT
TGAGCTTGTTCGGACTAAGCTTTTTGAGGCAAAAATTCAAGATTTTGTGG
CCTGAACATGACCTGAAAATAATCTGGGTATGTTCAGGTCATACCGTTGA
TCGTGGTCGAACCTGATTTTAATCTGCAGACTCTCACTTATTCGAACTTC
TATTATTCGATTCTTTTTATAAATCGAACATGTTTCAGGCTAGTCCGCGT
TATGGAGAAACCCTCTTAAAATACTTTCAATAATTCGAATCTCTCTGTAA
TTCGAACAAATAAGATTCGAATAAGCGAGAGTCAACTCTACTACCACAGA
CTAGGATTAAATACAATCATCTTCATGAACCAAACAGAGTAACTAAATTT
TTCTACAGGACCATGTGGCGGACGATTATGCTTGGAATATACAAGTGGAG
TTATCAAAGAAACTGAGGATGGAGGTTATAACTTCTTGCAAACTAAAGGT
TAGTAGTATTATTTTGAACGTTTTATCAATATATTGTGCCTAGGCGCAGT
AATGCAGTGGTCATCGTTCTTGACTTCCGTGCTGGAGGTCAGAGTTCGAT
TCCCACTCGGTGCTGCGATTCACTTGGCAAGTGAATGTACCTTGGCCCGG
GTCAACCCATACGATATGAGGGGAATAGGGTACCATCACTCTGATACAAG
AGTATGGGGAGATATGCTGGACATTGAATGTGGTGTGGTGATGGTACTCA
TATGTTCAGTACCTGCAAGAACGCAAGGTTCTCCAGTACAGTTCGAGTAT
CATCATCGATACAGCACGGCTCTGATGTGTCGCGAGCACAGAGTACAATG
TCTAGTAAGCAGTGTGATTTCCCTATCTAGGGGTACAAAATTATCCTGTG
ATAGGGCCCGGTCCGATGATATCGGAGGGTCAGTTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTAGTATCTTAAAAA
GAAGGAGAACCCCAGTGATGCTAATTTTGCGAAGAACTGCAATTATGGTC
GAAATATATTGAGATTTTAGTGTGTTTTAACGTTTTTCAGAATGTAAAGT
TTGAGCGAGAATTGCTATTTTAGCACTTCAACTTTTTTTTCATTATTTCG
ATTTCAGAGGGGTTCGGTGGCTTCCAGGCTATATTCCAACCATTATTGGA
GCAAATTTCCGCTTTTAAATCCTGAGATCCTAAGGTCGTAAGTCTTGAGT
CTCATGTTAAAACTCTGAGCCAAAATTCTGTAGTTTAACACGCTTAGAAA
TCATTTGTGATGTGTTTGAAATTTCGCAGGGAAATCCCCTTTGTCTCAAA
TATTTTTTCCATGATTGTGGTAACACCACGTTTAGCTTTCAGTGAAATGA
TTTGGAAAAACCGGCACTAACAACTTTGAAAATTAAGGATGGTAAAATAA
GTCATTCAGAATCTAGATAAACCAGGAGCTAACCATCTAACCAGCTAACC
ATGAGACATTTTTCAATTAAGTTTGGCGTTCACATATTTGGCTAATCCAT
AATAAGTTTTGGGGAAAATTTAGTCCCCTGCTAGTGATAAACTAGAACAT
AGGATTGCCGGCAACCAATATCTGTAGGGCGGGAGGGAGGTAAAAATTTT
CTGAGACTTGAGCACCGCCATCTTAAACCTTGTTTGTGCTTTCAGAGTGG
AGCCAATATCGCGCGGAACCAAGTGAGAAGTAAGGCTACTCGCAGGCGGG
ACGCTCCGGTAGTACCACAGGTGGAATGAGTGATTGAGACGATTTAAAAT
TAAACTACAATTTAACTATTGTTAAATAAATATTAACATACCTTAATAAG
TGTATTCATTTTGGTTGGGATTTGGTGGATTTGATGGATTTAGGCAAAAT
CCGCCAAATTAAATAACCGCCAAAATAAGCCTCTCGACACCAACCACTAA
ATTAAGTACACGCCAAAATTAATACACTTAAGTATCAGGTATCATCTTGA
ATACACGGAATTATTAAATCTGTATGAATATTTATATACTTACGTAAAAG
GTTACGATTTCATGATCGAATTCAGTTTCACGACATTCAACTCACGTGAA
GAGCTTGTAGAGATGGTGGTGAAGCACAATGAAGATATTTTGATTTCTGG
AGATAGAAAACGTTTTCGAAGTCTTTATTCTAATCTCAAATCGACGACAG
GAAGATATGGGTGGGTAACACTTACAAAGTTACATTTATATATTTTTTCT
TCATCGTATTTTATTTCTGCCGGTCAATTTTACCTTTTGGTCTCTCAAGT
TTACGTTTTGAGTGATTCTTCTCCCATCATTGAGCTATTCCAGAAAAAAA
TTGCTGAGAAGCTTTTAGGAAATGTGGCCCCATGGATTTTTTTTTCAATT
TTCAGGACCCCCCCCCCCGGATTTCTGTCCTCATTTTACTGACCACCGTG
GGTTTTCAACCATAATTTTACTGACCAACTTGGATTTCCCACCTCATTTC
ATTGACTACCCTGAAATTTTACACTCGAAAAAAAAGACCTTTTTATTTTC
CAGAACACCCTGGACGCATCCTCAACATAGGTGGTACAAACTATCTTTGG
AATAGCCCATCGGGCATTGTAGAGGACGTCTTCTGCGCTATTGTACTAAG
ACCTTCTGATGACCCATAATCATCGAGTGAAATTTCGCTACATTTTGATT
TTGGTCTTGTACACCTTTTTTCATTTTGCTCATCTGAGGTTTACGTAAAA
TCTTTTGGATGCCACCAGTAGCGGATCTAACGGGGACTCAAAATTTATGA
CGGCACCGAATGTTCATTTCTTTATATGGGATTAGGATAGCTACAACATA
AACCACCCCCCTCAGATCCACCACTGGGAACTGAAAAAAAAAGATATAGC
AACCCGGTGAGAAGCCAGTTGGGATAGGATTAAATCCCGCCCAGCTGGCA
CAGAACGTTATTTTAACGTTCATACAACGTTATATGGACGTTATGGACGT
TGATTGTTGATTTGACGTTGTTTTGACGTTGTGTGCCGGCTGGGCGAATA
AAATTAACAAATTCTAATTTCGTGGCTGATTTTAGCAATCAATTTGGGTC
TTCACAGATAAGTTTTCGTTAAGTTTCCGCATTTATTTTGTTTAGTTCAT
ACCTAACTATAGATGGCACGTTTGTTTTCCTGTTGCTGAATATGAATGAC
AAATACGCTGAAGGGATCTACACCATCACAGCTTTCTACAAAACAAAATT
CTCGAAGAAAGGGGATGAGCATTTTGAACAAATGAGATTTAGTTTTGGCA
TTAAAGGTAATAATTTTAAATTTTAATTTAAAAACGGTTAAGTTCACCAA
AAATCTTCCAGTAACATTTTGTAATTTCTCAGAGAAATTCCACGTGTTGC
GTAGACAGAGGGAGGGGGCAAAATTTGTGAAAGAGACACCTCTAATTATC
TGTCATAAAAATCTGCTCTCCTACACAAAATTTGCACCCCTCCTGTCTAC
GTTACTGGGTACGCTGTGTTGTGCTACTTCTTTACGGCTTTGAAATCTTC
TATTATCACATATTTTTCTCGTCAATTTCTTCTAGTAAACGGCGGATATA
CCCCATGGACGAATTTTGGTAAATGTAGCAAAGAATGTGATGTTGGACAA
ATGCGAAGAAGTAGAGAATGTACGAATCCAGAACCAAAGTTTGGTGGTCT
TGATTGCCGACATCTTGGACCAAAAGCCGATCGTTTTCCTTGCTTCAATG
TTCCGTGTAGCAATTGTAAGTTGTTTATATTCTATAGAATATCTACCTTT
GCAAAAATAGTATAAGTCAAGCATCATAAGTAAAGTCGTACCAGATTGAC
GGTGTGACAGTATCAGTCCTTTTTCTGTCGGCGTTCCGGTTTTTGAAGAA
AAATATGACGGTATTTCGGTGTTGGCGACCCATGGATGCCCTTCTAAGTT
AAAACTAATCCATCTCTAATTTAAAATGACCGAGTGGTCAAAGGCATCCA
AGTGTTCTCGGAACGTATCCCCGCTCTTGCTAATGTTCCGTAAAGTTCAT
AGATAGCCGAACCAGGTGACCGTGCAAGCCGTGAAAACAATCGATAGAAT
GCCTTAAAAGCTCTAGATTAGTGGACCACCCATGTAAAATAGACTCTATC
TATCCATCGTATGATTTCATTTTTCAGTGCAAATAGAAAAAGATCCCGTA
TTGGAAAACTTCAGTATTAAATCGAAGAAGAAACGTGACATTTCACTTTT
GAGTATGTTGGAATTTGGATTCCATTGTTTTATTACGCCATCGGAGAATG
TAAACGACGAAACAAGGATGTCATTGGCCATTCCTGCAAAGTAAGGTTTT
TTGGATCTTATAGGGATGGTCAGATCCAGGAATTATTATACACTTGATAT
ACAAGTGATTGAATTTTTCCGATTTCTAATTTTCTAGAAATGTCCGATAG
CACCCCTGTGTCACAGACACGCTGGAACCAACACTGAAAAATTAGGCCAA
AATTTCGTCCCCCGGTGAGAAAAATAACCTCCAATTTCAAACCCATTTGT
AAATTGACTTTGATTATATACCCGTTCGAAATTCAATGTAATAAACTGCA
CTCGAAAACCGTCCCTACTGTATATTTCAAACTTAAAATTGAATTTCGAT
AGAGATTTTCATCCCAACTGTGTGAAAAAGTTCCAACGAAAAATACGAAA
AAATAACGTAAAAACGTATCAACAGTAACAGGGAAGTCAATACGCAAGTT
GCAAAATCTGAAGACAAATCACGTTTTTACTCGTTATTTTTATGTGCTTG
TTACATGACATTTATTTCTGATTGGTTCGAATTTATTGACACTAATAGAG
TTATCAGATGTAGCTTGTAAAGCAAGTAACATGGGAATAAAATCACGTGA
ACTTTGTATATGTAATCAAATGATAACGAGTGCAATTCGAATATAATTGC
ACTAGTGATTTTTTTGTTATTAATTTTCCGAGTCCGAAAGGACGAGGAAA
ATTCGAAACAAAAAAATCACGAGTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAT
TACGAGCTAATCGCACAATGGCTTTCACTACTTTTTCCCAGTTAGGAAAG
TAAATTACAGAAATTACACTGAGAGTTTTATATTTTTCTCTTCTCTCTGT
CTTTCTTTTATTGTTGTTTATTGAGTCTCTTTCTCATAAAATAAATTTCG
AATGCAATTAAGACGTTTTGATACAAAAAAACGAAAGAAAAAACATTAAA
ATCAATTTTGTAAACATTGGCGTCGCATCGAAGAGTGTGATTAACGATTA
ATTGCTCTCTACAGGATGCAATTAACGATTAATTGCTCTCTTTGAGGGCG
CGCCAAATAAGAAAAAATAACCCATCGTGCGATTATTCGAGTAATCACAT
GTTTTGACTGCATTGATATAATTTTGCAACCCGTATATTAAAGTTTGAAA
AAAGTTTCTTTTTATTTATTTGTTTCAATTTTAGGATCTACAGTGTATCG
GATGGCGATTCAAGGGCTTTATTACAAATGATCCATATTATTACAAGACG
AAGCTTTCAGATTTATCTCCATTGTAGTTTAGCTCCCTGTTCAACTCAAA
AGTGTGAGAATGGTTCGTTTATTACAAAGCAGATTGCTAAAGGAAATATT
GGTGTCAGTGATATGCGTCTATCGGTTGGTATTGACGGTTAATAAATGTA
ACAAAGCGAGGTGAAGCAAACAAAAGAGATGAATGAAACACTCCTGTGTC
ACAGACCCGCTGGGAGCCCAGCCCCACTGGAAAATTTCGCAAAAATTTCG
TCCCCGGTGGGAAAATACCCTTACATTTCAGCCCCACTGAGAAATTGACT
TTCATTTCACCCTCATTCGAAATTCAATGTTTAAAAATTCCACCCCAAAC
CCAGCATCCCCACTGGATTTTTTAATTTTGGAATAACAGAATTTCTATCC
TCATTGGGATTTCAATACTGAGGAAAAAAGTTCCACCGGGGCTGTGAGAC
AGGGGTGTAATAAAATTGATATTTCATTATTTCATATTTGAATATCCCTG
CAATCTAGGTTTTTTAGACAGTTTTTCGATCGTTTTAAGTGGGTCCACTG
CAGGTGGGTTTAGCTTTTTTATCGTAGCTAATCTTAGGAAGGGGAAAGCA
TTCGAACTAGATATCCTGGTTTGTGATGCTACTGCCTTTAGGAAAGGCAA
ATTTAATTTGCTGTTTTACGGGTCAAGCTACCCAAAAAGAGGGTCGGACG
GCGAAAAAAATTGAAACAAAAAGTAGAATTAAAGCTATAAAATCTCCCAA
AAGACAGCAAAAACTACATCTTGACATAAATGCAA

Coding sequence (CDS) from alignment at sc0000124:346060..353494-

>TCONS_00011304 ID=TCONS_00011304|Name=TCONS_00011304|organism=Clytia hemisphaerica|type=CDS|length=7224bp|location=Sequence derived from alignment at sc0000124:346060..353494- (Clytia hemisphaerica)
GATCTACAGTGTATCGGATGGCGATTCAAGGGCTTTATTACAAATGATCC
ATATTATTACAAGACGAAGCTTTCAGATTTATCTCCATTGTAGTTTAGCT
CCCTGTTCAACTCAAAAGTGTGAGAATGGTTCGTTTATTACAAAGCAGAT
TGCTAAAGGAAATATTGGTGTCAGTGATATGCGTCTATCGGTTGGTATTG
ACGGTTAATGCAAATAGAAAAAGATCCCGTATTGGAAAACTTCAGTATTA
AATCGAAGAAGAAACGTGACATTTCACTTTTGAGTATGTTGGAATTTGGA
TTCCATTGTTTTATTACGCCATCGGAGAATGTAAACGACGAAACAAGGAT
GTCATTGGCCATTCCTGCAAATAAACGGCGGATATACCCCATGGACGAAT
TTTGGTAAATGTAGCAAAGAATGTGATGTTGGACAAATGCGAAGAAGTAG
AGAATGTACGAATCCAGAACCAAAGTTTGGTGGTCTTGATTGCCGACATC
TTGGACCAAAAGCCGATCGTTTTCCTTGCTTCAATGTTCCGTGTAGCAAT
TTTCATACCTAACTATAGATGGCACGTTTGTTTTCCTGTTGCTGAATATG
AATGACAAATACGCTGAAGGGATCTACACCATCACAGCTTTCTACAAAAC
AAAATTCTCGAAGAAAGGGGATGAGCATTTTGAACAAATGAGATTTAGTT
TTGGCATTAAAGGTTACGATTTCATGATCGAATTCAGTTTCACGACATTC
AACTCACGTGAAGAGCTTGTAGAGATGGTGGTGAAGCACAATGAAGATAT
TTTGATTTCTGGAGATAGAAAACGTTTTCGAAGTCTTTATTCTAATCTCA
AATCGACGACAGGAAGATATGGGACCATGTGGCGGACGATTATGCTTGGA
ATATACAAGTGGAGTTATCAAAGAAACTGAGGATGGAGGTTATAACTTCT
TGCAAACTAAAGATGATGGTGATCAGTTTTACCTGCATCGCTATCGTTGG
TTTGATTTTTGTGCATCCAACCTATGGCCAAGGATCTACAGTGTATCGGA
TGGCGATTCAAGGGCTTTATTACAAATGATCCATATTATTACAAGACGAA
GCTTTCAGATTTATCTCCATTGTAGTTTAGCTCCCTGTTCAACTCAAAAG
TGTGAGAATGGTTCGTTTATTACAAAGCAGATTGCTAAAGGAAATATTGG
TGTCAGTGATATGCGTCTATCGGTTGGTATTGACGGTTAATGCAAATAGA
AAAAGATCCCGTATTGGAAAACTTCAGTATTAAATCGAAGAAGAAACGTG
ACATTTCACTTTTGAGTATGTTGGAATTTGGATTCCATTGTTTTATTACG
CCATCGGAGAATGTAAACGACGAAACAAGGATGTCATTGGCCATTCCTGC
AAATAAACGGCGGATATACCCCATGGACGAATTTTGGTAAATGTAGCAAA
GAATGTGATGTTGGACAAATGCGAAGAAGTAGAGAATGTACGAATCCAGA
ACCAAAGTTTGGTGGTCTTGATTGCCGACATCTTGGACCAAAAGCCGATC
GTTTTCCTTGCTTCAATGTTCCGTGTAGCAATTTTCATACCTAACTATAG
ATGGCACGTTTGTTTTCCTGTTGCTGAATATGAATGACAAATACGCTGAA
GGGATCTACACCATCACAGCTTTCTACAAAACAAAATTCTCGAAGAAAGG
GGATGAGCATTTTGAACAAATGAGATTTAGTTTTGGCATTAAAGGTTACG
ATTTCATGATCGAATTCAGTTTCACGACATTCAACTCACGTGAAGAGCTT
GTAGAGATGGTGGTGAAGCACAATGAAGATATTTTGATTTCTGGAGATAG
AAAACGTTTTCGAAGTCTTTATTCTAATCTCAAATCGACGACAGGAAGAT
ATGGGACCATGTGGCGGACGATTATGCTTGGAATATACAAGTGGAGTTAT
CAAAGAAACTGAGGATGGAGGTTATAACTTCTTGCAAACTAAAGATGATG
GTGATCAGTTTTACCTGCATCGCTATCGTTGGTTTGATTTTTGTGCATCC
AACCTATGGCCAAGGATCTACAGTGTATCGGATGGCGATTCAAGGGCTTT
ATTACAAATGATCCATATTATTACAAGACGAAGCTTTCAGATTTATCTCC
ATTGTAGTTTAGCTCCCTGTTCAACTCAAAAGTGTGAGAATGGTTCGTTT
ATTACAAAGCAGATTGCTAAAGGAAATATTGGTGTCAGTGATATGCGTCT
ATCGGTTGGTATTGACGGTTAATGCAAATAGAAAAAGATCCCGTATTGGA
AAACTTCAGTATTAAATCGAAGAAGAAACGTGACATTTCACTTTTGAGTA
TGTTGGAATTTGGATTCCATTGTTTTATTACGCCATCGGAGAATGTAAAC
GACGAAACAAGGATGTCATTGGCCATTCCTGCAAATAAACGGCGGATATA
CCCCATGGACGAATTTTGGTAAATGTAGCAAAGAATGTGATGTTGGACAA
ATGCGAAGAAGTAGAGAATGTACGAATCCAGAACCAAAGTTTGGTGGTCT
TGATTGCCGACATCTTGGACCAAAAGCCGATCGTTTTCCTTGCTTCAATG
TTCCGTGTAGCAATTTTCATACCTAACTATAGATGGCACGTTTGTTTTCC
TGTTGCTGAATATGAATGACAAATACGCTGAAGGGATCTACACCATCACA
GCTTTCTACAAAACAAAATTCTCGAAGAAAGGGGATGAGCATTTTGAACA
AATGAGATTTAGTTTTGGCATTAAAGGTTACGATTTCATGATCGAATTCA
GTTTCACGACATTCAACTCACGTGAAGAGCTTGTAGAGATGGTGGTGAAG
CACAATGAAGATATTTTGATTTCTGGAGATAGAAAACGTTTTCGAAGTCT
TTATTCTAATCTCAAATCGACGACAGGAAGATATGGGACCATGTGGCGGA
CGATTATGCTTGGAATATACAAGTGGAGTTATCAAAGAAACTGAGGATGG
AGGTTATAACTTCTTGCAAACTAAAGATGATGGTGATCAGTTTTACCTGC
ATCGCTATCGTTGGTTTGATTTTTGTGCATCCAACCTATGGCCAAGGATC
TACAGTGTATCGGATGGCGATTCAAGGGCTTTATTACAAATGATCCATAT
TATTACAAGACGAAGCTTTCAGATTTATCTCCATTGTAGTTTAGCTCCCT
GTTCAACTCAAAAGTGTGAGAATGGTTCGTTTATTACAAAGCAGATTGCT
AAAGGAAATATTGGTGTCAGTGATATGCGTCTATCGGTTGGTATTGACGG
TTAATGCAAATAGAAAAAGATCCCGTATTGGAAAACTTCAGTATTAAATC
GAAGAAGAAACGTGACATTTCACTTTTGAGTATGTTGGAATTTGGATTCC
ATTGTTTTATTACGCCATCGGAGAATGTAAACGACGAAACAAGGATGTCA
TTGGCCATTCCTGCAAATAAACGGCGGATATACCCCATGGACGAATTTTG
GTAAATGTAGCAAAGAATGTGATGTTGGACAAATGCGAAGAAGTAGAGAA
TGTACGAATCCAGAACCAAAGTTTGGTGGTCTTGATTGCCGACATCTTGG
ACCAAAAGCCGATCGTTTTCCTTGCTTCAATGTTCCGTGTAGCAATTTTC
ATACCTAACTATAGATGGCACGTTTGTTTTCCTGTTGCTGAATATGAATG
ACAAATACGCTGAAGGGATCTACACCATCACAGCTTTCTACAAAACAAAA
TTCTCGAAGAAAGGGGATGAGCATTTTGAACAAATGAGATTTAGTTTTGG
CATTAAAGGTTACGATTTCATGATCGAATTCAGTTTCACGACATTCAACT
CACGTGAAGAGCTTGTAGAGATGGTGGTGAAGCACAATGAAGATATTTTG
ATTTCTGGAGATAGAAAACGTTTTCGAAGTCTTTATTCTAATCTCAAATC
GACGACAGGAAGATATGGGACCATGTGGCGGACGATTATGCTTGGAATAT
ACAAGTGGAGTTATCAAAGAAACTGAGGATGGAGGTTATAACTTCTTGCA
AACTAAAGATGATGGTGATCAGTTTTACCTGCATCGCTATCGTTGGTTTG
ATTTTTGTGCATCCAACCTATGGCCAAGGATCTACAGTGTATCGGATGGC
GATTCAAGGGCTTTATTACAAATGATCCATATTATTACAAGACGAAGCTT
TCAGATTTATCTCCATTGTAGTTTAGCTCCCTGTTCAACTCAAAAGTGTG
AGAATGGTTCGTTTATTACAAAGCAGATTGCTAAAGGAAATATTGGTGTC
AGTGATATGCGTCTATCGGTTGGTATTGACGGTTAATGCAAATAGAAAAA
GATCCCGTATTGGAAAACTTCAGTATTAAATCGAAGAAGAAACGTGACAT
TTCACTTTTGAGTATGTTGGAATTTGGATTCCATTGTTTTATTACGCCAT
CGGAGAATGTAAACGACGAAACAAGGATGTCATTGGCCATTCCTGCAAAT
AAACGGCGGATATACCCCATGGACGAATTTTGGTAAATGTAGCAAAGAAT
GTGATGTTGGACAAATGCGAAGAAGTAGAGAATGTACGAATCCAGAACCA
AAGTTTGGTGGTCTTGATTGCCGACATCTTGGACCAAAAGCCGATCGTTT
TCCTTGCTTCAATGTTCCGTGTAGCAATTTTCATACCTAACTATAGATGG
CACGTTTGTTTTCCTGTTGCTGAATATGAATGACAAATACGCTGAAGGGA
TCTACACCATCACAGCTTTCTACAAAACAAAATTCTCGAAGAAAGGGGAT
GAGCATTTTGAACAAATGAGATTTAGTTTTGGCATTAAAGGTTACGATTT
CATGATCGAATTCAGTTTCACGACATTCAACTCACGTGAAGAGCTTGTAG
AGATGGTGGTGAAGCACAATGAAGATATTTTGATTTCTGGAGATAGAAAA
CGTTTTCGAAGTCTTTATTCTAATCTCAAATCGACGACAGGAAGATATGG
GACCATGTGGCGGACGATTATGCTTGGAATATACAAGTGGAGTTATCAAA
GAAACTGAGGATGGAGGTTATAACTTCTTGCAAACTAAAGATGATGGTGA
TCAGTTTTACCTGCATCGCTATCGTTGGTTTGATTTTTGTGCATCCAACC
TATGGCCAAGGATCTACAGTGTATCGGATGGCGATTCAAGGGCTTTATTA
CAAATGATCCATATTATTACAAGACGAAGCTTTCAGATTTATCTCCATTG
TAGTTTAGCTCCCTGTTCAACTCAAAAGTGTGAGAATGGTTCGTTTATTA
CAAAGCAGATTGCTAAAGGAAATATTGGTGTCAGTGATATGCGTCTATCG
GTTGGTATTGACGGTTAATGCAAATAGAAAAAGATCCCGTATTGGAAAAC
TTCAGTATTAAATCGAAGAAGAAACGTGACATTTCACTTTTGAGTATGTT
GGAATTTGGATTCCATTGTTTTATTACGCCATCGGAGAATGTAAACGACG
AAACAAGGATGTCATTGGCCATTCCTGCAAATAAACGGCGGATATACCCC
ATGGACGAATTTTGGTAAATGTAGCAAAGAATGTGATGTTGGACAAATGC
GAAGAAGTAGAGAATGTACGAATCCAGAACCAAAGTTTGGTGGTCTTGAT
TGCCGACATCTTGGACCAAAAGCCGATCGTTTTCCTTGCTTCAATGTTCC
GTGTAGCAATTTTCATACCTAACTATAGATGGCACGTTTGTTTTCCTGTT
GCTGAATATGAATGACAAATACGCTGAAGGGATCTACACCATCACAGCTT
TCTACAAAACAAAATTCTCGAAGAAAGGGGATGAGCATTTTGAACAAATG
AGATTTAGTTTTGGCATTAAAGGTTACGATTTCATGATCGAATTCAGTTT
CACGACATTCAACTCACGTGAAGAGCTTGTAGAGATGGTGGTGAAGCACA
ATGAAGATATTTTGATTTCTGGAGATAGAAAACGTTTTCGAAGTCTTTAT
TCTAATCTCAAATCGACGACAGGAAGATATGGGACCATGTGGCGGACGAT
TATGCTTGGAATATACAAGTGGAGTTATCAAAGAAACTGAGGATGGAGGT
TATAACTTCTTGCAAACTAAAGATGATGGTGATCAGTTTTACCTGCATCG
CTATCGTTGGTTTGATTTTTGTGCATCCAACCTATGGCCAAGGATCTACA
GTGTATCGGATGGCGATTCAAGGGCTTTATTACAAATGATCCATATTATT
ACAAGACGAAGCTTTCAGATTTATCTCCATTGTAGTTTAGCTCCCTGTTC
AACTCAAAAGTGTGAGAATGGTTCGTTTATTACAAAGCAGATTGCTAAAG
GAAATATTGGTGTCAGTGATATGCGTCTATCGGTTGGTATTGACGGTTAA
TGCAAATAGAAAAAGATCCCGTATTGGAAAACTTCAGTATTAAATCGAAG
AAGAAACGTGACATTTCACTTTTGAGTATGTTGGAATTTGGATTCCATTG
TTTTATTACGCCATCGGAGAATGTAAACGACGAAACAAGGATGTCATTGG
CCATTCCTGCAAATAAACGGCGGATATACCCCATGGACGAATTTTGGTAA
ATGTAGCAAAGAATGTGATGTTGGACAAATGCGAAGAAGTAGAGAATGTA
CGAATCCAGAACCAAAGTTTGGTGGTCTTGATTGCCGACATCTTGGACCA
AAAGCCGATCGTTTTCCTTGCTTCAATGTTCCGTGTAGCAATTTTCATAC
CTAACTATAGATGGCACGTTTGTTTTCCTGTTGCTGAATATGAATGACAA
ATACGCTGAAGGGATCTACACCATCACAGCTTTCTACAAAACAAAATTCT
CGAAGAAAGGGGATGAGCATTTTGAACAAATGAGATTTAGTTTTGGCATT
AAAGGTTACGATTTCATGATCGAATTCAGTTTCACGACATTCAACTCACG
TGAAGAGCTTGTAGAGATGGTGGTGAAGCACAATGAAGATATTTTGATTT
CTGGAGATAGAAAACGTTTTCGAAGTCTTTATTCTAATCTCAAATCGACG
ACAGGAAGATATGGGACCATGTGGCGGACGATTATGCTTGGAATATACAA
GTGGAGTTATCAAAGAAACTGAGGATGGAGGTTATAACTTCTTGCAAACT
AAAGATGATGGTGATCAGTTTTACCTGCATCGCTATCGTTGGTTTGATTT
TTGTGCATCCAACCTATGGCCAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_006335	XLOC_006335	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00011304-protein	TCONS_00011304-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000124	supercontig	sc0000124:346060..353494 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0232136	0.0454189	0.104444	0.0515799	0.162233	0.137767	0.133601	0.202514	0.175602	0.364288	0.0702914	0.130735	0.155144	0.124241	0.157851	0.0707298	5.79941	13.811	0.131745	0.15405	23.3105	22.2385	8.60247	12.5224	14.5169	11.1771	1.0764	0.682215	0.247077	0.265114

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000884	TSP1_rpt

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00011304 vs. Swiss-Prot (Human)

BLAST of TCONS_00011304 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00011304 (transcript) - C. hemisphaerica