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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011127 ID=TCONS_00011127|Name=TCONS_00011127|organism=Clytia hemisphaerica|type=transcript|length=1236bp
ttttatttatttaacaaCGTTCCTGATCGTAGATAATAGCGTGTTCCGTC
CCTAAATCCAACATCGTGGTTCATAAATTTAGAGACGCGCTGATATTTCA
GCACGTTATCAAATAATTCTAAAGCTCCGTACTGTtaatgaatttttcaa
aacaaaacaaaaagatggcGGAGGCAAAACCCACAACAAGTCCAACTCCA
AAAGGTATTTTAAAACATAATCATGAGCATAATCCACATCCTGAAGTCAA
GTTCGATGAAATGAATATTTTAGAGACCTACCATccagcaaacaaagatt
atGGTCATATGAAAATCGATGAACCACCAACACCTTACAATCACGAGttt
tctGAAGGAGAAGAAGGTGCTGAAGGAGGGTCATCTGCTGGTAGTGGTGT
TAGTGGTGTTGATGCAAGTCTGTTGGCTGGTAAACTAGAGAGTACTGAAT
CACGGAAAGACCAtcaaagtgaaagtgaaaatgaagatgacgaTGATGAA
CATTTAAGTGAAGCTGCAAAACTAAAAAAGAAAGCGTTTAGCAgaaaata
ttACTAATACTTCACAGATACTTAAAGAAATAACATACAAACAGCGGATT
AGACGATAATGTCGGACGATGAAAACGAAGACGaacttttgaacattttt
accGAATGTAAACAACAGATACTTCAGGAATTGCGACTTTTCCTCGTTAA
AGACATCGAGCCGCAAAAACTATACGCTAGCCTACGGTCTAGAGGCGTGT
TTGACGAAGACGATCAAGAGGAAATCGAATATGATCGACTTCCTCGAAAG
AAACGAGCAGAACGATTCCTCGATACGATTTCTCGAAAAGGAGATGCAGG
CTTTGATGCATTTTGTCAATGTATAGTAGAACAGTTGACCGGACAGTTgc
atttattaaaaaaaatattgacagtatttgaaagtaaaatccaaGGTGCC
GAAGAACTGCAGCATACCCGAAAATTAACCCGAATTCCACCGATGTTGAT
GATGAACAATTTTCCATCGCCCGGACAAATGGGTGGGCCGGAACTTCCCG
AAGGATATTTCGGACGGTATATGAGTGAGCCACCACCCTCCTACGCAGAA
TCaacattgaaatattcttgatagtaacagttttttttttaaatcaactt
ttcgcaaaaaatttgtaaatagtatttTGAATCAATAATTTTCTCATTGC
ATATATCTTTTGAGTTATCCCTTCCTTcaataaaat Run BLAST on NCBI protein sequence of TCONS_00011127-protein >TCONS_00011127-protein ID=TCONS_00011127-protein|Name=TCONS_00011127-protein|organism=Clytia hemisphaerica|type=polypeptide|length=170bp
MSDDENEDELLNIFTECKQQILQELRLFLVKDIEPQKLYASLRSRGVFDE
DDQEEIEYDRLPRKKRAERFLDTISRKGDAGFDAFCQCIVEQLTGQLHLL
KKILTVFESKIQGAEELQHTRKLTRIPPMLMMNNFPSPGQMGGPELPEGY
FGRYMSEPPPSYAESTLKYS Run BLAST on NCBI transcript from alignment at sc0000121:238105..244785- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011127 ID=TCONS_00011127|Name=TCONS_00011127|organism=Clytia hemisphaerica|type=transcript|length=6681bp|location=Sequence derived from alignment at sc0000121:238105..244785- (Clytia hemisphaerica)
TTTTATTTATTTAACAACGTTCCTGATCGTAGATAATAGCGTGTTCCGTC
CCTAAATCCAACATCGTGGTTCATAAATTTAGAGACGCGCTGATATTTCA
GCACGTTATCAAATAATTCTAAAGCTCCGTACTGTTAATGAATTTTTCAA
AACAAAACAAAAAGATGGCGGAGGCAAAACCCACAACAAGTCCAACTCCA
AAAGGTATTTTAAAACATAATCATGAGCATAATCCACATCCTGAAGTCAA
GTTCGATGAAATGAATATTTTAGAGACCTACCATCCAGCAAACAAAGATT
ATGGTCATATGAAAATCGATGAACCACCAACACCTTACAATCACGAGGTA
AAAAAGTTTGGTGTTGTGTTTTTTATTTTAGATGGTTCAGTTTTTGATAG
TTTGTGTCCATTTTTTATTTAAAGACTATTAGAATATTAAAGAAGGGGTA
AAATAACTTTCAAAATACAAGTGCAAAGATGCCCCAACTTCAGTAGCAAC
GTCCATTTTGTGTGTTCTGGTGCGTGTGCTGAGTGAGATAAAAAATTGAG
ACAATCTCAATGACAATGATGGCAATAGGTTGCAATAAACCTTTAATGTG
ACATTCTATTCTAAGCCTTTAGATGCTTTCCCAATTTGGGAATTTAAGAA
AGTGAATGTCAAGATAAAGGGCCAAAGTTTATGCTCGCATGAGAAAAGTT
TTTAACAAAATAGAAAATCTGTATCTTTAATTAACTTCTAGAACTTGAAA
AAAAGTGTAAGATTTTAGGCATTTTATCCTTTTAAAACTTTTTAAGTCAA
AAGGCAAATGCTACAGCTCTTCTCAAGAATAATTTGTCCCTTTAATCCAT
TTTTTGTATGGAAATATTATTTTCATATATCTTGATTTGCTAAAGTTACT
GCTCGGGAAAGTTTATACGTCTAAATCACGAAAATGTAATGTATTACTGT
CAACTGATGTAACTTGGGACTATCTGACAAAACATGGGACGGTAATTCGG
CCACCATTTCACTGAACCTCCGAAGTTATGATTTGAGTTAATGAACGGCG
TATTAAAAATACACGATTTCTCTTTCGTACCAAGTAGGCTTTTAAATCAA
ATATGAAAAAAATCTGTAGTGGACCACACACAAGTGTCTGTGCACTTTAA
GAGGAATGAAGAAGTATGATTGACAGTCTGGGAAATCCTCTCAATTGCAC
GCTTATGTTCCGAGGCCGTAAGTGCGCAATTGCACGGTTATCAAAATGGC
AGAATTTTTAAGCGTGTAATTACACGCTTATCGAAATTGTAACGGGCGAA
AGCCTAGGGCAGTTTTACTCAAAATTTATCGTAGAAGAAGATTCTGTAAA
AATGGATTGCCCGTTAAACCATGCCTTCGCCCGAATTAGAGAATTCTGAA
CCCCTTGAAATCCCTAAGCAATTTCAACCGGGGCGGGAGCAGGCGTAAAT
TATAACCATGCAATTGCGCGCTTACGCCCTCGGAACATAAGCGTGCAATT
GAGAGGATTTCCCGGACTGATTGATAAACTTGGTGGAGTTATCAAAACAA
ATTTAAAAGAGATTTAACAGTAAGAGAAAATACAGGCCAGATATCAACCA
GTCCCATGTTTCGACCAATTGTCCCCAGTTAGAGCAGTTGACGGTAGGGC
TATCTGACAAAACATGTGACAGCAATTCGGCCTACATTTCACCAAACCGC
CAAAGTCATTTTATTAACATACCTGCGAATCATGGATAGCAAATAATGTA
AATACGCTACTCTACCAGGAAGGCTTAATTACACCACAACCAAACAGTTA
GTCACACTAGGAAATCAAGCTTTCAGAAAAGACTAACATCAGTCATCTAC
AGGATGTATTTGCAACAACAAGGATGAGAATTACCTGAATCAAGTTTGCA
AGACAATTAATTAAAACTTGAAAGTTTGAAACAAAATAAAGCGTGCAGCA
GCCAAAATCAACCAACAAAAATTTGTCATTTAATTCCTGAGACAGCACTT
TGATTTTTAAGGCCTTGTTTATACGCTAAAGTAAAAATAATTCTGTACAT
GTAAATGGGTCAGTGTTTGTGGTCCGGCAAAATTTCCGGAGAAATAGCCT
ATCTGGCAGTGTGCAGACATAGGTGGGTTCCGTCTCCCCCGTAGATCTTT
TTATTGGGAAGTTGATCTTCAAATTAGTTCTGAAGGTTGGCTTGGCTCAA
ATCTTTTCATCTATGGCTCAAATGTTAGGAAATTTCTCATAGTTTTTGAG
AATGTTGATTTCATTAAAAAGCGCCGGGTTATTTTTTCATGAATCCCTTT
AGAAGTTTTGTGGCGCATTTTCCTGCTTGAGAGTCAGGTAAACGATATAG
CGTTTTCGCAACATTAATCTTTGATAAGTATTTTGGCGGGACGCTAGTGT
GACTAACTGTCAAAAGGAAAAATCTTTGCTACAAGAAACGCGTAAATGTG
ATTGTGCTTATTTGCGCAAGCGTTCAAACACAGATACCAAAAAAGTCTGT
TCTTCCACCACAGAAAATTGTGAGATCTGTTAATCAACACTCTGTAACTT
TGACATGTCACATAGTGTCCTCCAGGGTTTGTTCCCCCCACCAGGGTTTG
TTCCCCCCACCAGGGTTTGTTCCCCCCAGAAAATTCTGAAAATATCAGTT
CCCCCCATGTAGCCATATAAATTTCTCAAATTTCAACCTGACACAAACGT
GAAATTTTGCTGCAGTTTTTATGCCTAGTGAATTTTTCAGTCATGATCTA
ATCACATGATATCATGTGGACTGACCTTGGTTGTTAAGATAAAGTTGAAG
TGATTTCACACTTTCCCCCACCAAATTTGCCAACTATCGATGTTTTCCCC
CCTCTTTTTTCCCCCCTTTACTATTCAAATTTTCATTCCCCCCCCCTCAC
CCATCCAAAATTGGAAAATTGGTTTCCCCTATGGACACTATGCTGTGAAT
CAATCGCGCATGCTGGAAAAAGTCTCTAGAGAAAAACAACACAAATCAAA
AAATGGCGTCAAGATGTGAGCAGCCTGTGTTTTGTGTTTATATCAAAGTT
ATTGTTTTTCTTTTCTTTTTAGTTTTCTGAAGGAGAAGAAGGTGCTGAAG
GAGGGTCATCTGCTGGTAGTGGTGTTAGTGGTGTTGATGCAAGTCTGTTG
GCTGGTAAACTAGAGAGTACTGAATCACGGAAAGACCATCAAAGTGAAAG
TGAAAATGAAGATGACGATGATGAACATTTAAGTGAAGCTGCAAAACTAA
AAAAGAAAGCGTTTAGCAGTAAGAGGAAAAATCATTATAATGAATTTACA
AATGTACAAAAAGCACGCGAAATGATTGCTAAAGAGTTAGCTGAATTGGA
AGATGATAATTAAGAATGGTGGTAGAGTGCGGGAAAAACGAAATTTGATT
GAATTTTTAATTTATAAACACTTGATTGAAAGTCACCATCATGTGGTTTG
TTGCTAAAAAGATATGAATTTATTATTAGGTTGATTTACGAAAATTAGAA
TCATGAAATTGGAAAGCTAATGAAGACTTAAAAACAACTTTGTCATTTAA
ACTGACATTAAAAATAATAAACATAAATGTTGATATGTATATTATAATAT
ACATATTATAATAGTTCATAGATTTTTTCTCAATTTATCCCTCCCTCCAT
TATACATAGTTTTTTTAAAGCAAATTTCTAATGCACCTTTTAGGAATTTC
TACTTGTCATTTTTCACTATTTAAAATTTTATTCAAAAATTCTGTTACAG
GGTTTTTTAGAGTTGTCTTGAGTTGTGTCTAAAAGACACTTTTGCGAATA
GCTCTTGGTATACCGTAGCAAACAAACGTTTAAAACCAAACGTAATTTCA
TTTTCTTTTCATCAATATATCCTTAGCTAGGGGAGGGGGGATACCAGGTG
ATACTAGGTTTGCGAGGTGACGGGTATGTCCAAGGCAAAAAATTTTTTGG
AGAGAGTAAAAATTGGCGTTTTTGGGACTCTAAGAGAGACGTTTCTCAAA
AGTTTTGTAGATTTTCGCTCGTTTTTGAAAATCACGACCCTTTGAGAGAA
GAAATTTTGGACCCTTACAAAGACTCAATTTGCTTTTTAATGGTTTTTGT
ACCCCTTTGAGAGACTTTCGATGTTGTGAAAAAAGGAGTCTTATGCCTCG
CACATACCCGGCCCCCATTTTGCCTAAGTGCCCCCCCCCCTCGGATCCTC
TTTAAATGTGTAGCGTGCCTATATAGACCTTCCACTATATGTGGTACACG
ATTTTAATTGAGAAATGTTTTTTTCGGGCTTATGGGCTTATAATATATCC
TAAAAAATGGTTTGAACCAACTTTAACTTACAGAAACTGAGTGCTTTTTG
GGGTGTACTAAGTGACAAAGAATTTTTTCGTTATCTGGTTACCCACATTT
GAGTTTCTTTTAGGATTTTTGTGTTTGTAAAGAATGTTTATTTGTGATAT
TATAGTAGTAATATTAGTAGTATTAAAATTGTAACATATTTCTTCAGACA
CACATTTAGTATAACATGAAATTATACTTGAAAGCATTGGAATCATAACT
GAGTTGTGAGGTTCACAGTTTCTCTATCGTGCTAAAATCGAAATATATCG
CCATAGATTTGAATGTCTATTTAACCCGTTTAACTGTAATTTAGCTAACA
GCCAATTCAGCGCCAAGGCCTGGCGAATGGGCGGCCGCCTTCCACCCTTT
CTGTCTAAATGTCATTGCTTCGGGTCTATGTTGAAGTTAAAAAAAGATGT
GTGACTTTCTTAGAAAACTATTCGAGATATGTCTTTTTGGAAATTCCCCT
TTCTTATTATTCTCTACACATAGCAGCATATAGCGTCATTTTTGATAGAA
ACTTAATAATCGAAAAAAGCTGACTTATAATTGATCACCCTCCTACATGG
TATGACCAAGTTGTGTGTTATAGAACAGTTGNTCATTTTTGATAGAAACT
TAATAATCGAAAAATGCTGACTTATAATTGATCACCCTCCTACATGGTAA
GATTAAGTTGTGTTTATAGAACAAGTAATGAAGCTTCAAATTACAGAGCG
GGGGAGAGATGTCTTTAAATGACGTTTATTGATAGCGAAACTTTTTTGTT
TTGATTTTGATTATGAGCGTGTTGTATCACATACAAGAGCATTATTTCTA
TTGACAAATTATTTCTGATGAAACGAAACGTGTAGTTATCTGTTAATGTT
AGGTATGGTTGTATTCGGCAGAGGAAGAAATTTTGATTCTTTCATATAGT
TTTTTTCAGGCAGTAGGCTAGCTTGAATACCGTTTTCGTTGATTTTATTG
AATTCTATTTGAATCATGCTTTTCAAATCCTTTTATTTTATTTTTTAGTA
AACAGGGACCTTTGCCAATGCTTATTCTTGAAAATCTTAAGTTTTAAAAT
CAACCGCTTTTAAGATGATTTATTGAGGTATTGCTTGTAGTACTAGGGTA
CTAGGGTTGGCGGATAAGGGGTATGTGCGGATGGGACCTTCAAAAACCGA
CCCTTAGAGAGACTGAATTTTGCTGAAAAGGTGACCCTTAGAGACTTTTT
TTTTAAACTTCCGTCGATTTTTGAAAAACTCCCTACCCTCGGAGAGACTT
TTTCCAAAAAAATTTCCTAAAATCATGAATTTTCTGACCCTTAGAGAGAC
TGATTTAAATTTTCGGATTTTTGCGACCCTTAGAGAGACAACTGAAGGGT
GAAAAACCGACCCTTACCGTCCGCACATACTCAGCACCCATTTTTGCCTA
AGCCTCCCCTCCCGGGGGCTTGTAGTTATATATTTTGTCCTTCAAGAGGA
ATGTATCAAAATGTGCGGACTGTCAATTTTTTTGGAATAGACTTTAATTT
CAAGCTCGGAGCTCCTAGATCCATAATTTATAAAAGGCGGAAACATCTAA
TCAGCGGACACTAACGTGCTTCCCCAATGGTGTTCGCTGATAAGAGACTC
CATTGTACTTTCAACTGTATTCTTCCATATATTTTCAGGAAAATATTACT
AATACTTCACAGATACTTAAAGAAATAACATACAAACAGCGGATTAGACG
ATAATGTCGGACGATGAAAACGAAGACGAACTTTTGAACATTTTTACCGA
ATGTAAACAACAGATACTTCAGGAATTGCGACTTTTCCTCGTTAAAGACA
TCGAGCCGCAAAAACTATACGCTAGCCTACGGTCTAGAGGCGTGTTTGAC
GAAGACGATCAAGAGGAAATCGAATATGATCGACTTCCTCGAAAGAAACG
AGCAGAACGATTCCTCGATACGATTTCTCGAAAAGGAGATGCAGGCTTTG
ATGCATTTTGTCAATGTATAGTAGAACAGTTGACCGGACAGTTGCATTTA
TTAAAAAAAATATTGACAGTATTTGAAAGTAAAATCCAAGGTGCCGAAGA
ACTGCAGCATACCCGAAAATTAACCCGAATTCCACCGATGTTGATGATGA
ACAATTTTCCATCGCCCGGACAAATGGGTGGGCCGGAACTTCCCGAAGGA
TATTTCGGACGGTATATGAGTGAGCCACCACCCTCCTACGCAGAATCAAC
ATTGAAATATTCTTGATAGTAACAGTTTTTTTTTTAAATCAACTTTTCGC
AAAAAATTTGTAAATAGTATTTTGAATCAATAATTTTCTCATTGCATATA
TCTTTTGAGTTATCCCTTCCTTCAATAAAAT Coding sequence (CDS) from alignment at sc0000121:238105..244785- >TCONS_00011127 ID=TCONS_00011127|Name=TCONS_00011127|organism=Clytia hemisphaerica|type=CDS|length=513bp|location=Sequence derived from alignment at sc0000121:238105..244785- (Clytia hemisphaerica)
ATGTCGGACGATGAAAACGAAGACGAACTTTTGAACATTTTTACCGAATG
TAAACAACAGATACTTCAGGAATTGCGACTTTTCCTCGTTAAAGACATCG
AGCCGCAAAAACTATACGCTAGCCTACGGTCTAGAGGCGTGTTTGACGAA
GACGATCAAGAGGAAATCGAATATGATCGACTTCCTCGAAAGAAACGAGC
AGAACGATTCCTCGATACGATTTCTCGAAAAGGAGATGCAGGCTTTGATG
CATTTTGTCAATGTATAGTAGAACAGTTGACCGGACAGTTGCATTTATTA
AAAAAAATATTGACAGTATTTGAAAGTAAAATCCAAGGTGCCGAAGAACT
GCAGCATACCCGAAAATTAACCCGAATTCCACCGATGTTGATGATGAACA
ATTTTCCATCGCCCGGACAAATGGGTGGGCCGGAACTTCCCGAAGGATAT
TTCGGACGGTATATGAGTGAGCCACCACCCTCCTACGCAGAATCAACATT
GAAATATTCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011127-exon-sc0000121-1575043694:244439..244785 | TCONS_00011127-exon-sc0000121-1575043694:244439..244785 | Clytia hemisphaerica | exon |
| TCONS_00011127-exon-sc0000121-1575043694:241518..241713 | TCONS_00011127-exon-sc0000121-1575043694:241518..241713 | Clytia hemisphaerica | exon |
| TCONS_00011127-exon-sc0000121-1575043694:238105..238797 | TCONS_00011127-exon-sc0000121-1575043694:238105..238797 | Clytia hemisphaerica | exon |
| TCONS_00011127-exon-sc0000121-1510915933:244439..244785 | TCONS_00011127-exon-sc0000121-1510915933:244439..244785 | Clytia hemisphaerica | exon |
| TCONS_00011127-exon-sc0000121-1510915933:241518..241713 | TCONS_00011127-exon-sc0000121-1510915933:241518..241713 | Clytia hemisphaerica | exon |
| TCONS_00011127-exon-sc0000121-1510915933:238105..238797 | TCONS_00011127-exon-sc0000121-1510915933:238105..238797 | Clytia hemisphaerica | exon |
| TCONS_00011127-exon-sc0000121-1491911889:244439..244785 | TCONS_00011127-exon-sc0000121-1491911889:244439..244785 | Clytia hemisphaerica | exon |
| TCONS_00011127-exon-sc0000121-1491911889:241518..241713 | TCONS_00011127-exon-sc0000121-1491911889:241518..241713 | Clytia hemisphaerica | exon |
| TCONS_00011127-exon-sc0000121-1491911889:238105..238797 | TCONS_00011127-exon-sc0000121-1491911889:238105..238797 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000121 | supercontig | sc0000121:238105..244785 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042981 | regulation of apoptotic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0042981 |
regulation of apoptotic process |
Blast
The following BLAST results are available for this feature:
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