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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011091 ID=TCONS_00011091|Name=TCONS_00011091|organism=Clytia hemisphaerica|type=transcript|length=3118bp
ttgaaattatggTTAGTAAGCATTTGTTTATTATAGAGATGAAATAAGAC
AAGAAAGGCAAAATGATTAACTCAACTGCTAGGTTGGTTTTATTTATTGT
GATATTTTCAGgccaaatttcagcaaagAGCGTCATTGTTTCACAAACGA
ATATAGCAAAAAATGGCCCTAATTGTGGTACAAAGACACAAccatgtcaa
acaatcaaatatGCAATTGATAACATTGCACGAGATGGagatattgtttt
tattgatggAGGCTGTAACAGTTATACATACAACATTGATGAAACAATTA
TCATAGATCAACATATAACAATCACAGCCCTTGAACATGATCAAAAATGT
AATTATCCTTTAATTAAGGGGACAAAGACTATGACGACACTTCCAGGGTT
CATTTTATTTGAAGTACGTTCCAATTTAAACATAAGTTTTATAAGACACA
CGATGGTGCAACCCTCTTATGGTCCATATTCCTACATTTTTTCCCTGAAT
AAAACAAGCAGCAGTATTGTAATTCAAGTTAGTGATTCTGATTTCAGTAA
CGTACTTGGAATAGTAACCTTTGTTACACAAAATAACACTGTTGCATTTG
AAAGATGCAATTTATCTGAAATACAAAATGATCAAGTTAATTTCCAAAAA
GTACCAGGAAATCATGTAATCCTTAATCAAAGTCATCTTCAAGACACTGG
TGATTTTGTTTCACAATTGTTTGTAGGATTCGAGGAAGTGActttttttg
ataccattttcaACGGAGTAAATATATATACAGAAGATCAATATTCAGGC
CACAGTCTAAGTCTGATAAACTGTTATTTGAACAACACCGAGCTCTTTAT
TGACGATGCAAACTCTACTCTTTTCCATAACATTACAATTGGGCAGGATA
GCTTAATATATATTTCCAATGCAGCTTACGTTGATGTATTGGACGTACTG
TTCACCGACAACTATAAGGTGGCTTCATCGCAATATTTTATGAGCTTCGA
TTCTGTTCAAAATGTCAATGTAAATGGGCTCATCTTGATAGATTCTTTGT
CTCAAATCGTTTTCCAATTACGAGGCTCACATCTGAATATGAATGCTAAA
ATCGAACACGCCTTTCATGACTActatcaaaaacttcaaatgcAGCATTT
TTTCGGTGATAATAACGAATATGGCtatataacattttctttggATAGGA
CGAACCCTTTTCATATCACAGATCCTAATGGTCTCATAGGGTCTACCACA
GATGAGTATTTGGTTTCTTGTTCACCAAACTTCAGAGCAGATTTCATTGT
TGACAATGCTGTATCACCTAACCTCTACTCTTCATTATGTGTACCACTTC
CAAGCCAATATTACACTCTTGCGGAATCGAAGGCCTATTTGAATGAAACa
aaccaaaaattttcaacttctccaaatacaaaaattcaaaaatgtccTTT
TGAAGCACAGTGTGGTGATGGTCAAATATCGAACAAAGAACTTTATTGGG
GAATGGTAATTGACAATACCAGTTTCGTTAACACATTTGGAGATTCAGTT
CATGGTTCCTCAATCGCATTCTTTCCTTGTCCGGAATTATATTGTTGTCC
GATAAATGAAAATTGTAATGGTGGATTTGATTCGTGTTGGAGAGGGCGCA
AAGGAACTTTATGTGGTGATTGTAAGGATGGTTTTGTTGTTCCGATTATC
GGTCATGGTTGTATGCCGGAACTTGATTGTGACGTCGTCACTTTCGTTgc
tgttttctttttattaacACCAGTATGGCTATTGATGGTCAAATACGCTT
GTGTATTGATAGAGAAAGTTCTCCAAATCGGGAAACGTCTTCGAGAAGGA
GTTGACAGGGGACGGAGAATTCCTGAACCCGATCGGAATCAGGCTCAGGA
GCATGATGAGCACATCGGATATATTTTGGATGAACCTTGTGGAGATGGAG
GTCGAATGTCACCAATTATCGGTCAACCACCGAATCGTCCAATTAATGAA
AAAGATGACGTTGATATTTTCATTGTATCATTAATGGAGATTGTTTTCGT
GTTTTATCAGGTTGCATACACAATGAGAGTGAAAACTGCTCAAAGAATCA
AACACCAAGAATCATTGATCATTGACATTCTAACCATCCCTTTCACAGGG
AGCATTGATGCAACTCCACCATCCAATCAATATTGCGCTGCATTGACCAG
AGATGCGTTTGCCATTGAAGCATTCAAAATCAGTCCactatttttcagtt
tctgCATTCTTCTTGCAGCAATCGCCTTATTTCAAATGAAAGAATGGATC
GGAAAATTCCGCCGACGGGTGAACAATGGAGAAAGAGAACCATTGTTAAG
ATATCAACAACTTGATCAAAATACACCCAATTATGATGGTAGAAGAAAAC
CTCTCGATCTTCAGTTGAGTGAATGCGTTGACATTCCCACCCTCCATTAT
TTGGTATTTTGTGAAACGTGAAAACGGAGAAGGGTTGACTCGTAAACAAA
TCTCATTTATGTatcattttcttcaaatcatTGATGGCGGATATCGAAAA
TGGAAGCCAGAAGAAAACCAACCCATGCAATGGAAACCGGCCCTTATTAC
ACGTGCTTTAATTATCGCTGTACTCATCAATATTAATGATCCTTTTGTAC
GATTGACAACCTTTTGTTTGGTTTTCTTCGTATTCACAATATTTGAATCC
ACGATGAAACCGTATAAAGACAAAACCTTAAACACATTGAGTATCAATAG
CTGGGTTTTGTTGATGATGTTGGCTATCTTTAACCTCTTTTGGCTTTTCA
CTGGAATAAATGAAATTGAGAAAAGTGATGTTTTGTCGTTTATTGGTTAT
CTCCTATTGGTTTGCGAGATTATCTTGCTTTTACTGCCGTTTTTATCggt
gatattttatattcttGGATGTCTGGTTTACACGACTGTTCAAAAGTATT
taataaaaaagcaaaattgattAGTACCTTTACTTTGTTATAATAAAGTT
TATTTTAACTTTACTGGTTTGGATCTACTTTAAATATAGAATTTAATTAT
TTATCAATAGTCCCCAATTACCAATTCCTTTGACTTTATCTAAGTTCGTA
TCAAAAGTGCATCGAAAC Run BLAST on NCBI protein sequence of TCONS_00011091-protein >TCONS_00011091-protein ID=TCONS_00011091-protein|Name=TCONS_00011091-protein|organism=Clytia hemisphaerica|type=polypeptide|length=802bp
MINSTARLVLFIVIFSGQISAKSVIVSQTNIAKNGPNCGTKTQPCQTIKY
AIDNIARDGDIVFIDGGCNSYTYNIDETIIIDQHITITALEHDQKCNYPL
IKGTKTMTTLPGFILFEVRSNLNISFIRHTMVQPSYGPYSYIFSLNKTSS
SIVIQVSDSDFSNVLGIVTFVTQNNTVAFERCNLSEIQNDQVNFQKVPGN
HVILNQSHLQDTGDFVSQLFVGFEEVTFFDTIFNGVNIYTEDQYSGHSLS
LINCYLNNTELFIDDANSTLFHNITIGQDSLIYISNAAYVDVLDVLFTDN
YKVASSQYFMSFDSVQNVNVNGLILIDSLSQIVFQLRGSHLNMNAKIEHA
FHDYYQKLQMQHFFGDNNEYGYITFSLDRTNPFHITDPNGLIGSTTDEYL
VSCSPNFRADFIVDNAVSPNLYSSLCVPLPSQYYTLAESKAYLNETNQKF
STSPNTKIQKCPFEAQCGDGQISNKELYWGMVIDNTSFVNTFGDSVHGSS
IAFFPCPELYCCPINENCNGGFDSCWRGRKGTLCGDCKDGFVVPIIGHGC
MPELDCDVVTFVAVFFLLTPVWLLMVKYACVLIEKVLQIGKRLREGVDRG
RRIPEPDRNQAQEHDEHIGYILDEPCGDGGRMSPIIGQPPNRPINEKDDV
DIFIVSLMEIVFVFYQVAYTMRVKTAQRIKHQESLIIDILTIPFTGSIDA
TPPSNQYCAALTRDAFAIEAFKISPLFFSFCILLAAIALFQMKEWIGKFR
RRVNNGEREPLLRYQQLDQNTPNYDGRRKPLDLQLSECVDIPTLHYLVFC
ET Run BLAST on NCBI transcript from alignment at sc0000121:279894..284278+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011091 ID=TCONS_00011091|Name=TCONS_00011091|organism=Clytia hemisphaerica|type=transcript|length=4385bp|location=Sequence derived from alignment at sc0000121:279894..284278+ (Clytia hemisphaerica)
ttgaaattatggTTAGTAAGCATTTGTTTATTATAGAGATGAAATAAGAC
AAGAAAGGCAAAATGATTAACTCAACTGCTAGGTTGGTTTTATTTATTGT
GATATTTTCAGGTAGGTTTTGATTTCCCAGTACTTATTTTTGGATATTAC
ACATCTATACCTTTCTCATGTTATAAAATGACGCAATTATTAACTTTTTG
CTGAAAATATATTTCTCTTTTTATCTCAGACGTGTTCTTTATCTTTGATA
TTACTTTCNAATGATACAATTAttaactttttgttgaaaatatatttctc
TTTTTATCTTTGATATTACTTTCTGGGGGCCTTTCTTGAGATTTCTAAAC
AATTAAAATACGAGCACATGTAGGAATTGGCGATTTCTGCCCTTGcaaca
taaaaatttgaaaacatttcaaattcagcAAACGGTTTTTCGTTACCAGG
TTTCAGGGCTTTATTTCTGAGAGTATTTCCCATGATTTCTGTTATTTCAG
actttcaaaaagtttagaaatcttGTAAAAATAACAAAGTGATCTACAGG
CATGCTATATTACTTCTGTCTCACTACTTGTcaagcaagctagacgacta
atttagacatgttagaaataaagcaaaaagtaatggaaggaacaatttta
tacaaactaaattccgtaacaataatcgtattatcatataacgcctatac
tactgtattacacgcattataaacgactccagtctatgtaCATATTTCTT
ACATAAAAAAGCCTTCGAATCGTAACTTCTTGAGTTTTAAGCATCAAAAT
GGttttaatttcaccatttcgtGATATATCTTGGTAAGATCTTGTCAAGA
TTTTCTACCAGGGTGTGTACATATTTCTTACATAAAAAAAGCCTTCGAAT
CGTAACTTTTTGAGTTCTAAAAGCCTCAAAATGGTTTTAATTTGCACCAT
TTCGTTGGtatttttattcagttttctaAGAAATTTGGGTGTTTTGAAGT
CTGGGTTTGGAGTCTACAAAGCCTAAAAATTTCTCAACTTGTATTTAATA
Tttaggccatcgaagccttatgttcttatatagtttgttcttataaaaaa
cgtgaatttttgtcattattttttcaggccaaatttcagcaaagAGCGTC
ATTGTTTCACAAACGAATATAGCAAAAAATGGCCCTAATTGTGGTACAAA
GACACAAccatgtcaaacaatcaaatatGCAATTGATAACATTGCACGAG
ATGGagatattgtttttattgatggAGGCTGTAACAGTTATACATACAAC
ATTGATGAAACAATTATCATAGATCAACATATAACAATCACAGCCCTTGA
ACATGATCAAAAATGTAATTATCCTTTAATTAAGGGGACAAAGACTATGA
CGACACTTCCAGGGTTCATTTTATTTGAAGTACGTTCCAATTTAAACATA
AGTTTTATAAGACACACGATGGTGCAACCCTCTTATGGTCCATATTCCTA
CATTTTTTCCCTGAATAAAACAAGCAGCAGTATTGTAATTCAAGTTAGTG
ATTCTGATTTCAGTAACGTACTTGGAATAGTAACCTTTGTTACACAAAAT
AACACTGTTGCATTTGAAAGATGCAATTTATCTGAAATACAAAATGATCA
AGTTAATTTCCAAAAAGTACCAGGAAATCATGTAATCCTTAATCAAAGTC
ATCTTCAAGACACTGGTGATTTTGTTTCACAATTGTTTGTAGGATTCGAG
GAAGTGActttttttgataccattttcaACGGAGTAAATATATATACAGA
AGATCAATATTCAGGCCACAGTCTAAGTCTGATAAACTGTTATTTGAACA
ACACCGAGCTCTTTATTGACGATGCAAACTCTACTCTTTTCCATAACATT
ACAATTGGGCAGGATAGCTTAATATATATTTCCAATGCAGCTTACGTTGA
TGTATTGGACGTACTGTTCACCGACAACTATAAGGTGGCTTCATCGCAAT
ATTTTATGAGCTTCGATTCTGTTCAAAATGTCAATGTAAATGGGCTCATC
TTGATAGATTCTTTGTCTCAAATCGTTTTCCAATTACGAGGCTCACATCT
GAATATGAATGCTAAAATCGAACACGCCTTTCATGACTActatcaaaaac
ttcaaatgcAGCATTTTTTCGGTGATAATAACGAATATGGCtatataaca
ttttctttggATAGGACGAACCCTTTTCATATCACAGATCCTAATGGTCT
CATAGGGTCTACCACAGATGAGTATTTGGTTTCTTGTTCACCAAACTTCA
GAGCAGATTTCATTGTTGACAATGCTGTATCACCTAACCTCTACTCTTCA
TTATGTGTACCACTTCCAAGCCAATATTACACTCTTGCGGAATCGAAGGC
CTATTTGAATGAAACaaaccaaaaattttcaacttctccaaatacaaaaa
ttcaaaaatgtccTTTTGAAGCACAGTGTGGTGATGGTCAAATATCGAAC
AAAGAACTTTATTGGGGAATGGTAATTGACAATACCAGTTTCGTTAACAC
ATTTGGAGATTCAGTTCATGGTTCCTCAATCGCATTCTTTCCTTGTCCGG
AATTATATTGTTGTCCGATAAATGAAAATTGTAATGGTGGATTTGATTCG
TGTTGGAGAGGGCGCAAAGGAACTTTATGTGGTGATTGTAAGGATGGTTT
TGTTGTTCCGATTATCGGTCATGGTTGTATGCCGGAACTTGATTGTGACG
TCGTCACTTTCGTTgctgttttctttttattaacACCAGTATGGCTATTG
ATGGTCAAATACGCTTGTGTATTGATAGAGAAAGTTCTCCAAATCGGGAA
ACGTCTTCGAGAAGGAGTTGACAGGGGACGGAGAATTCCTGAACCCGATC
GGAATCAGGCTCAGGAGCATGATGAGCACATCGGATATATTTTGGATGAA
CCTTGTGGAGATGGAGGTCGAATGTCACCAATTATCGGTCAACCACCGAA
TCGTCCAATTAATGAAAAAGATGACGTTGATATTTTCATTGTATCATTAA
TGGAGATTGTTTTCGTGTTTTATCAGGTTGCATACACAATGAGAGTGAAA
ACTGCTCAAAGAATCAAACACCAAGAATCATTGATCATTGACATTCTAAC
CATCCCTTTCACAGGGAGCATTGATGCAACTCCACCATCCAATCAATATT
GCGCTGCATTGACCAGAGATGCGTTTGCCATTGAAGCATTCAAAATCAGT
CCactatttttcagtttctgCATTCTTCTTGCAGCAATCGCCTTATTTCA
AATGAAAGAATGGATCGGAAAATTCCGCCGACGGGTGAACAATGGAGAAA
GAGAACCATTGTTAAGATATCAACAACTTGATCAAAATACACCCAATTAT
GATGGTAGAAGAAAACCTCTCGATCTTCAGTTGAGTGAATGGTATTTGAA
TTTCATGTTTATTGCATATTTACCATTTGCTTTGTTTTTACTGAAGGTTA
TCAATTGTTGGAGTGGCTTTACTGATGAAAGTTTGTCATATCTTCAATCA
TCTGTCTCCTGCTTTTCTCGACCTTGTCAAGCAATTGCGTTATTCGTTTT
CATCTTTATCTGGGTACCCGTACCTTTAGCAATGTACTTCGCAACTGAAC
TTTTAAGAGCTTGTAAAATTAACACATCACAATTTCTTGTAGCGTTGACA
TTCCCACCCTCCATTATTTGGTATTTTGTGAAACGTGAAAACGGAGAAGG
GTTGACTCGTAAACAAATCTCATTTATGTatcattttcttcaaatcatTG
ATGGCGGATATCGAAAATGGAAGCCAGAAGAAAACCAACCCATGCAATGG
AAACCGGCCCTTATTACACGTGCTTTAATTATCGCTGTACTCATCAATAT
TAATGATCCTTTTGTACGATTGACAACCTTTTGTTTGGTTTTCTTCGTAT
TCACAATATTTGAATCCACGATGAAACCGTATAAAGACAAAACCTTAAAC
ACATTGAGTATCAATAGCTGGGTTTTGTTGATGATGTTGGCTATCTTTAA
CCTCTTTTGGCTTTTCACTGGAATAAATGAAATTGAGAAAAGTGATGTTT
TGTCGTTTATTGGTTATCTCCTATTGGTTTGCGAGATTATCTTGCTTTTA
CTGCCGTTTTTATCggtgatattttatattcttGGATGTCTGGTTTACAC
GACTGTTCAAAAGTATTtaataaaaaagcaaaattgattAGTACCTTTAC
TTTGTTATAATAAAGTTTATTTTAACTTTACTGGTTTGGATCTACTTTAA
ATATAGAATTTAATTATTTATCAATAGTCCCCAATTACCAATTCCTTTGA
CTTTATCTAAGTTCGTATCAAAAGTGCATCGAAAC Coding sequence (CDS) from alignment at sc0000121:279894..284278+ >TCONS_00011091 ID=TCONS_00011091|Name=TCONS_00011091|organism=Clytia hemisphaerica|type=CDS|length=7227bp|location=Sequence derived from alignment at sc0000121:279894..284278+ (Clytia hemisphaerica)
ATGATTAACTCAACTGCTAGGTTGGTTTTATTTATTGTGATATTTTCAGg
ccaaatttcagcaaagAGCGTCATTGTTTCACAAACGAATATAGCAAAAA
ATGGCCCTAATTGTGGTACAAAGACACAAccatgtcaaacaatcaaatat
GCAATTGATAACATTGCACGAGATGGagatattgtttttattgatggAGG
CTGTAACAGTTATACATACAACATTGATGAAACAATTATCATAGATCAAC
ATATAACAATCACAGCCCTTGAACATGATCAAAAATGTAATTATCCTTTA
ATTAAGGGGACAAAGACTATGACGACACTTCCAGGGTTCATTTTATTTGA
AGTACGTTCCAATTTAAACATAAGTTTTATAAGACACACGATGGTGCAAC
CCTCTTATGGTCCATATTCCTACATTTTTTCCCTGAATAAAACAAGCAGC
AGTATTGTAATTCAAGTTAGTGATTCTGATTTCAGTAACGTACTTGGAAT
AGTAACCTTTGTTACACAAAATAACACTGTTGCATTTGAAAGATGCAATT
TATCTGAAATACAAAATGATCAAGTTAATTTCCAAAAAGTACCAGGAAAT
CATGTAATCCTTAATCAAAGTCATCTTCAAGACACTGGTGATTTTGTTTC
ACAATTGTTTGTAGGATTCGAGGAAGTGActttttttgataccattttca
ACGGAGTAAATATATATACAGAAGATCAATATTCAGGCCACAGTCTAAGT
CTGATAAACTGTTATTTGAACAACACCGAGCTCTTTATTGACGATGCAAA
CTCTACTCTTTTCCATAACATTACAATTGGGCAGGATAGCTTAATATATA
TTTCCAATGCAGCTTACGTTGATGTATTGGACGTACTGTTCACCGACAAC
TATAAGGTGGCTTCATCGCAATATTTTATGAGCTTCGATTCTGTTCAAAA
TGTCAATGTAAATGGGCTCATCTTGATAGATTCTTTGTCTCAAATCGTTT
TCCAATTACGAGGCTCACATCTGAATATGAATGCTAAAATCGAACACGCC
TTTCATGACTActatcaaaaacttcaaatgcAGCATTTTTTCGGTGATAA
TAACGAATATGGCtatataacattttctttggATAGGACGAACCCTTTTC
ATATCACAGATCCTAATGGTCTCATAGGGTCTACCACAGATGAGTATTTG
GTTTCTTGTTCACCAAACTTCAGAGCAGATTTCATTGTTGACAATGCTGT
ATCACCTAACCTCTACTCTTCATTATGTGTACCACTTCCAAGCCAATATT
ACACTCTTGCGGAATCGAAGGCCTATTTGAATGAAACaaaccaaaaattt
tcaacttctccaaatacaaaaattcaaaaatgtccTTTTGAAGCACAGTG
TGGTGATGGTCAAATATCGAACAAAGAACTTTATTGGGGAATGGTAATTG
ACAATACCAGTTTCGTTAACACATTTGGAGATTCAGTTCATGGTTCCTCA
ATCGCATTCTTTCCTTGTCCGGAATTATATTGTTGTCCGATAAATGAAAA
TTGTAATGGTGGATTTGATTCGTGTTGGAGAGGGCGCAAAGGAACTTTAT
GTGGTGATTGTAAGGATGGTTTTGTTGTTCCGATTATCGGTCATGGTTGT
ATGCCGGAACTTGATTGTGACGTCGTCACTTTCGTTgctgttttcttttt
attaacACCAGTATGGCTATTGATGGTCAAATACGCTTGTGTATTGATAG
AGAAAGTTCTCCAAATCGGGAAACGTCTTCGAGAAGGAGTTGACAGGGGA
CGGAGAATTCCTGAACCCGATCGGAATCAGGCTCAGGAGCATGATGAGCA
CATCGGATATATTTTGGATGAACCTTGTGGAGATGGAGGTCGAATGTCAC
CAATTATCGGTCAACCACCGAATCGTCCAATTAATGAAAAAGATGACGTT
GATATTTTCATTGTATCATTAATGGAGATTGTTTTCGTGTTTTATCAGGT
TGCATACACAATGAGAGTGAAAACTGCTCAAAGAATCAAACACCAAGAAT
CATTGATCATTGACATTCTAACCATCCCTTTCACAGGGAGCATTGATGCA
ACTCCACCATCCAATCAATATTGCGCTGCATTGACCAGAGATGCGTTTGC
CATTGAAGCATTCAAAATCAGTCCactatttttcagtttctgCATTCTTC
TTGCAGCAATCGCCTTATTTCAAATGAAAGAATGGATCGGAAAATTCCGC
CGACGGGTGAACAATGGAGAAAGAGAACCATTGTTAAGATATCAACAACT
TGATCAAAATACACCCAATTATGATGGTAGAAGAAAACCTCTCGATCTTC
AGTTGAGTGAATGCGTTGACATTCCCACCCTCCATTATTTGGTATTTTGT
GAAACGTGAATGATTAACTCAACTGCTAGGTTGGTTTTATTTATTGTGAT
ATTTTCAGgccaaatttcagcaaagAGCGTCATTGTTTCACAAACGAATA
TAGCAAAAAATGGCCCTAATTGTGGTACAAAGACACAAccatgtcaaaca
atcaaatatGCAATTGATAACATTGCACGAGATGGagatattgtttttat
tgatggAGGCTGTAACAGTTATACATACAACATTGATGAAACAATTATCA
TAGATCAACATATAACAATCACAGCCCTTGAACATGATCAAAAATGTAAT
TATCCTTTAATTAAGGGGACAAAGACTATGACGACACTTCCAGGGTTCAT
TTTATTTGAAGTACGTTCCAATTTAAACATAAGTTTTATAAGACACACGA
TGGTGCAACCCTCTTATGGTCCATATTCCTACATTTTTTCCCTGAATAAA
ACAAGCAGCAGTATTGTAATTCAAGTTAGTGATTCTGATTTCAGTAACGT
ACTTGGAATAGTAACCTTTGTTACACAAAATAACACTGTTGCATTTGAAA
GATGCAATTTATCTGAAATACAAAATGATCAAGTTAATTTCCAAAAAGTA
CCAGGAAATCATGTAATCCTTAATCAAAGTCATCTTCAAGACACTGGTGA
TTTTGTTTCACAATTGTTTGTAGGATTCGAGGAAGTGActttttttgata
ccattttcaACGGAGTAAATATATATACAGAAGATCAATATTCAGGCCAC
AGTCTAAGTCTGATAAACTGTTATTTGAACAACACCGAGCTCTTTATTGA
CGATGCAAACTCTACTCTTTTCCATAACATTACAATTGGGCAGGATAGCT
TAATATATATTTCCAATGCAGCTTACGTTGATGTATTGGACGTACTGTTC
ACCGACAACTATAAGGTGGCTTCATCGCAATATTTTATGAGCTTCGATTC
TGTTCAAAATGTCAATGTAAATGGGCTCATCTTGATAGATTCTTTGTCTC
AAATCGTTTTCCAATTACGAGGCTCACATCTGAATATGAATGCTAAAATC
GAACACGCCTTTCATGACTActatcaaaaacttcaaatgcAGCATTTTTT
CGGTGATAATAACGAATATGGCtatataacattttctttggATAGGACGA
ACCCTTTTCATATCACAGATCCTAATGGTCTCATAGGGTCTACCACAGAT
GAGTATTTGGTTTCTTGTTCACCAAACTTCAGAGCAGATTTCATTGTTGA
CAATGCTGTATCACCTAACCTCTACTCTTCATTATGTGTACCACTTCCAA
GCCAATATTACACTCTTGCGGAATCGAAGGCCTATTTGAATGAAACaaac
caaaaattttcaacttctccaaatacaaaaattcaaaaatgtccTTTTGA
AGCACAGTGTGGTGATGGTCAAATATCGAACAAAGAACTTTATTGGGGAA
TGGTAATTGACAATACCAGTTTCGTTAACACATTTGGAGATTCAGTTCAT
GGTTCCTCAATCGCATTCTTTCCTTGTCCGGAATTATATTGTTGTCCGAT
AAATGAAAATTGTAATGGTGGATTTGATTCGTGTTGGAGAGGGCGCAAAG
GAACTTTATGTGGTGATTGTAAGGATGGTTTTGTTGTTCCGATTATCGGT
CATGGTTGTATGCCGGAACTTGATTGTGACGTCGTCACTTTCGTTgctgt
tttctttttattaacACCAGTATGGCTATTGATGGTCAAATACGCTTGTG
TATTGATAGAGAAAGTTCTCCAAATCGGGAAACGTCTTCGAGAAGGAGTT
GACAGGGGACGGAGAATTCCTGAACCCGATCGGAATCAGGCTCAGGAGCA
TGATGAGCACATCGGATATATTTTGGATGAACCTTGTGGAGATGGAGGTC
GAATGTCACCAATTATCGGTCAACCACCGAATCGTCCAATTAATGAAAAA
GATGACGTTGATATTTTCATTGTATCATTAATGGAGATTGTTTTCGTGTT
TTATCAGGTTGCATACACAATGAGAGTGAAAACTGCTCAAAGAATCAAAC
ACCAAGAATCATTGATCATTGACATTCTAACCATCCCTTTCACAGGGAGC
ATTGATGCAACTCCACCATCCAATCAATATTGCGCTGCATTGACCAGAGA
TGCGTTTGCCATTGAAGCATTCAAAATCAGTCCactatttttcagtttct
gCATTCTTCTTGCAGCAATCGCCTTATTTCAAATGAAAGAATGGATCGGA
AAATTCCGCCGACGGGTGAACAATGGAGAAAGAGAACCATTGTTAAGATA
TCAACAACTTGATCAAAATACACCCAATTATGATGGTAGAAGAAAACCTC
TCGATCTTCAGTTGAGTGAATGCGTTGACATTCCCACCCTCCATTATTTG
GTATTTTGTGAAACGTGAATGATTAACTCAACTGCTAGGTTGGTTTTATT
TATTGTGATATTTTCAGgccaaatttcagcaaagAGCGTCATTGTTTCAC
AAACGAATATAGCAAAAAATGGCCCTAATTGTGGTACAAAGACACAAcca
tgtcaaacaatcaaatatGCAATTGATAACATTGCACGAGATGGagatat
tgtttttattgatggAGGCTGTAACAGTTATACATACAACATTGATGAAA
CAATTATCATAGATCAACATATAACAATCACAGCCCTTGAACATGATCAA
AAATGTAATTATCCTTTAATTAAGGGGACAAAGACTATGACGACACTTCC
AGGGTTCATTTTATTTGAAGTACGTTCCAATTTAAACATAAGTTTTATAA
GACACACGATGGTGCAACCCTCTTATGGTCCATATTCCTACATTTTTTCC
CTGAATAAAACAAGCAGCAGTATTGTAATTCAAGTTAGTGATTCTGATTT
CAGTAACGTACTTGGAATAGTAACCTTTGTTACACAAAATAACACTGTTG
CATTTGAAAGATGCAATTTATCTGAAATACAAAATGATCAAGTTAATTTC
CAAAAAGTACCAGGAAATCATGTAATCCTTAATCAAAGTCATCTTCAAGA
CACTGGTGATTTTGTTTCACAATTGTTTGTAGGATTCGAGGAAGTGActt
tttttgataccattttcaACGGAGTAAATATATATACAGAAGATCAATAT
TCAGGCCACAGTCTAAGTCTGATAAACTGTTATTTGAACAACACCGAGCT
CTTTATTGACGATGCAAACTCTACTCTTTTCCATAACATTACAATTGGGC
AGGATAGCTTAATATATATTTCCAATGCAGCTTACGTTGATGTATTGGAC
GTACTGTTCACCGACAACTATAAGGTGGCTTCATCGCAATATTTTATGAG
CTTCGATTCTGTTCAAAATGTCAATGTAAATGGGCTCATCTTGATAGATT
CTTTGTCTCAAATCGTTTTCCAATTACGAGGCTCACATCTGAATATGAAT
GCTAAAATCGAACACGCCTTTCATGACTActatcaaaaacttcaaatgcA
GCATTTTTTCGGTGATAATAACGAATATGGCtatataacattttctttgg
ATAGGACGAACCCTTTTCATATCACAGATCCTAATGGTCTCATAGGGTCT
ACCACAGATGAGTATTTGGTTTCTTGTTCACCAAACTTCAGAGCAGATTT
CATTGTTGACAATGCTGTATCACCTAACCTCTACTCTTCATTATGTGTAC
CACTTCCAAGCCAATATTACACTCTTGCGGAATCGAAGGCCTATTTGAAT
GAAACaaaccaaaaattttcaacttctccaaatacaaaaattcaaaaatg
tccTTTTGAAGCACAGTGTGGTGATGGTCAAATATCGAACAAAGAACTTT
ATTGGGGAATGGTAATTGACAATACCAGTTTCGTTAACACATTTGGAGAT
TCAGTTCATGGTTCCTCAATCGCATTCTTTCCTTGTCCGGAATTATATTG
TTGTCCGATAAATGAAAATTGTAATGGTGGATTTGATTCGTGTTGGAGAG
GGCGCAAAGGAACTTTATGTGGTGATTGTAAGGATGGTTTTGTTGTTCCG
ATTATCGGTCATGGTTGTATGCCGGAACTTGATTGTGACGTCGTCACTTT
CGTTgctgttttctttttattaacACCAGTATGGCTATTGATGGTCAAAT
ACGCTTGTGTATTGATAGAGAAAGTTCTCCAAATCGGGAAACGTCTTCGA
GAAGGAGTTGACAGGGGACGGAGAATTCCTGAACCCGATCGGAATCAGGC
TCAGGAGCATGATGAGCACATCGGATATATTTTGGATGAACCTTGTGGAG
ATGGAGGTCGAATGTCACCAATTATCGGTCAACCACCGAATCGTCCAATT
AATGAAAAAGATGACGTTGATATTTTCATTGTATCATTAATGGAGATTGT
TTTCGTGTTTTATCAGGTTGCATACACAATGAGAGTGAAAACTGCTCAAA
GAATCAAACACCAAGAATCATTGATCATTGACATTCTAACCATCCCTTTC
ACAGGGAGCATTGATGCAACTCCACCATCCAATCAATATTGCGCTGCATT
GACCAGAGATGCGTTTGCCATTGAAGCATTCAAAATCAGTCCactatttt
tcagtttctgCATTCTTCTTGCAGCAATCGCCTTATTTCAAATGAAAGAA
TGGATCGGAAAATTCCGCCGACGGGTGAACAATGGAGAAAGAGAACCATT
GTTAAGATATCAACAACTTGATCAAAATACACCCAATTATGATGGTAGAA
GAAAACCTCTCGATCTTCAGTTGAGTGAATGCGTTGACATTCCCACCCTC
CATTATTTGGTATTTTGTGAAACGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011091-exon-sc0000121-1491911889:279894..280004 | TCONS_00011091-exon-sc0000121-1491911889:279894..280004 | Clytia hemisphaerica | exon |
| TCONS_00011091-exon-sc0000121-1510915933:279894..280004 | TCONS_00011091-exon-sc0000121-1510915933:279894..280004 | Clytia hemisphaerica | exon |
| TCONS_00011091-exon-sc0000121-1575043694:279894..280004 | TCONS_00011091-exon-sc0000121-1575043694:279894..280004 | Clytia hemisphaerica | exon |
| TCONS_00011091-exon-sc0000121-1491911889:281021..283334 | TCONS_00011091-exon-sc0000121-1491911889:281021..283334 | Clytia hemisphaerica | exon |
| TCONS_00011091-exon-sc0000121-1510915933:281021..283334 | TCONS_00011091-exon-sc0000121-1510915933:281021..283334 | Clytia hemisphaerica | exon |
| TCONS_00011091-exon-sc0000121-1575043694:281021..283334 | TCONS_00011091-exon-sc0000121-1575043694:281021..283334 | Clytia hemisphaerica | exon |
| TCONS_00011091-exon-sc0000121-1491911889:283586..284278 | TCONS_00011091-exon-sc0000121-1491911889:283586..284278 | Clytia hemisphaerica | exon |
| TCONS_00011091-exon-sc0000121-1510915933:283586..284278 | TCONS_00011091-exon-sc0000121-1510915933:283586..284278 | Clytia hemisphaerica | exon |
| TCONS_00011091-exon-sc0000121-1575043694:283586..284278 | TCONS_00011091-exon-sc0000121-1575043694:283586..284278 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000121 | supercontig | sc0000121:279894..284278 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR012334 | Pectin_lyas_fold |
| IPR011050 | Pectin_lyase_fold/virulence |
Blast
The following BLAST results are available for this feature:
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