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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011089 ID=TCONS_00011089|Name=TCONS_00011089|organism=Clytia hemisphaerica|type=transcript|length=4402bpRun BLAST on NCBI transcript from alignment at sc0000121:245104..279085+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00011089 ID=TCONS_00011089|Name=TCONS_00011089|organism=Clytia hemisphaerica|type=transcript|length=33982bp|location=Sequence derived from alignment at sc0000121:245104..279085+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00011089 vs. Swiss-Prot (Human)
Match: PGBM (Basement membrane-specific heparan sulfate proteoglycan core protein OS=Homo sapiens GN=HSPG2 PE=1 SV=4) HSP 1 Score: 589.726 bits (1519), Expect = 3.476e-176 Identity = 432/1505 (28.70%), Postives = 674/1505 (44.78%), Query Frame = 3
Query: 75 GLSPIVSLEPKFATVVEGHNLTIQCNVTGKPVPIILWSKPYGWLSHNHIVTGNELKILKASPEDGGTYVCSGQNKLGTESQRSVI--------SVERRVLPKLATDAPDKTTYVGDTTFFVCSVLEGIPRPLVFWKSARGYRVPQSYVKETDDGKVILTFKKVWTILA------GSYTCVAMNTAGTTEISAELKVKGDPRILVRPRGIYRVTNGDKVQIECISYGAPTPSI----ILKFPSNFNQSARNEMEFTKRKGFMKFEFTADERFSGNFTCISRNRLGQKTEWVQIIVNK---EDTLPQTTIQQSKMTARLGERISIPCLVTGIPNPTVHWTK-----------EDDTESISNEPVLWFDSISHKDGGEYHCNAENRQGKSRVSVILEVIVPPIVHVTPSNLVVRKGYSFNLKCDAIGSPKPIIEWRKLNHTEMPSSLLVSDTELVSISASTEYTGAYVCSAKNIHGEEKAFANISVVEPPW-------------VEAVGPNVIRTNLTTNITLECKTTGDPQPALKWFKPLRSTGSMDTLT-GKFIIKSLSKYDQGQYRCQASNLGGVAEERFNIIINELPKVYIEEGLTV-SVIAESEFTFNCHGQGTPMPELRWTKITGNLSKDVVASPDGTLYFPKVTSADEGRYRCIGRNEYGSVIAEIQLSVEGAPKITYSTPSLTVNMKESAKLYCNVTGSPKPKVTWFKLHSTEMPKYFYIKDGYFMIPIVEYTDGGIFICRAQNSEGVAEAKVELKVNE-FIPQFNSTKKSMIVYDRIINTLYKTSIKLSIKPQSLHGLLLYSGQ------------LEKDFISIGLSNGFVIFQFDLGSGPAFIKSEQKIRADEWITVTAQRDGPVGVLKVSGQRKTKGRSLGRFNGLNLRSELFIGGHEDFEKVFQQTKHDVGFNGCASELFINGVKKDFA-FSLKNFNAKQCSTCDHQNCLNGGVCIPKSTKIGHLCQCPKSYIGQFCEE-RVERCFPDACHSGGRCINKPLN-GYRCKCVLGRFGEFCEEGEAISVPSFK-RHSYISYPVPNISPASLKISISFKTVSITGKSILLSISRPTVNTXXXXXXXXXXXXXXXXXSDGAVRLQSYEIVPPNEWSTVNIELKGRYASLSVNQKQAIKGASKGRSISLQLHTQTLVYVGGEE---------GLSTGLHGCVQELRINEQRIDLVNSFVEAHKFSSCYKVLSPCLSQPCVNNGKCVTVAAGKFQCACAKGYEGNTCQRKIKMCGKYFGCKNGGRCWTDRLSGNKMCRCPIGYGGESCAK-----IMDIKETIQFS--------HGSYF------VYPKNTI-RTVED--NLIRLSFRTESTKNGLILWYG---QSARISPDFFLIGMRSGSLEVQYELGSGLAEGRTKKMFNDGQWHDIIMKRDGSMLNLRVDGRAELELKAPGSNKNLDVFSILHLGGADDVFRVSRRKYARGFVGCVRDFYVEKRK--------MNFHKDPLNGANIDTC 4271
GL+ + +E + V EG L + C V G+ + W K G L H G++L++ SP D G YVC + G E + S S R P ++ D P T G F C + +G + WK+ +E +D I + TI+ G+Y CVA N G + L V G P + V P G V G V +EC+S G P S I P+ Q M+ ++ +A +G + C+++N LG + V++IV+ PQ +++++T G ++ C TG P PT+HW+K E DT L ++ +D G+Y CNA + G + ++IL V PP P + V+ G + L+C A G+P +W ++ + +P + L A+ E +G Y C N G +AFA + V PP V P + ++ ++ C D L+WFK ++ G I++L + QG Y CQA G A+ ++I LP V I +V +V+ F C G P P++ W+K+ G+L +V S G + V AD G+YRC N G+ + + L V+ P+I+ + V +A C +G P P ++W KL + +P +++ M+P V D G ++C A N +G +A L+V E +P F T S + I + K IK++ +P S G+LLY+GQ + DFIS GL G F+FD GSG A I+ + + TVT R G L V G S G+F GL+L EL++GG+ D+ + + GF GC EL I G + F +L C TC + C NGG C S ++C CP + G CE + C P+AC C+N+P GY C+C LGR G CEEG ++ PS SY++ P + L++ + FK ++ G + V ++ L ++ G + Y+L G L+S E + W V+ E + SL VN + + +S G+S L LHT L+Y+GG E +S GCV E+ +N +R+DL SF+ + CY SPC QPC + C+ +FQC C G++G+ C+ + C C +GG C R C C G+ G C + I + ++ S +G+YF +P + R++ + I L RT ST +GL+LW G A DF +G++ G L +Y+LGSG A ++ NDG+WH + R+G +++VDG + ++PG N ++ +++GGA DV ++ +++ G GCV++ + + ++ GAN C
Sbjct: 2922 GLAQPIYIEASSSHVTEGQTLDLNCVVPGQAHAQVTWYKRGGSLPARHQTHGSQLRLHLVSPADSGEYVCRAASGPGPEQEASFTVTVPPSEGSSYRLRSPVISIDPPSSTVQQGQDASFKCLIHDGAAPISLEWKTRN---------QELEDNVHISPNGSIITIVGTRPSNHGTYRCVASNAYGVAQSVVNLSVHGPPTVSVLPEGPVWVKVGKAVTLECVSAGEPRSSARWTRISSTPAKLEQRTYGLMD---SHAVLQIS-SAKPSDAGTYVCLAQNALGTAQKQVEVIVDTGAMAPGAPQVQAEEAELTVEAGHTATLRCSATGSPAPTIHWSKLRSPLPWQHRLEGDT--------LIIPRVAQQDSGQYICNATSPAGHAEATIILHVESPPYATTVPEHASVQAGETVQLQCLAHGTPPLTFQWSRVG-SSLPGRATARNELLHFERAAPEDSGRYRCRVTNKVGSAEAFAQLLVQGPPGSLPATSIPAGSTPTVQVTPQLETKSIGASVEFHCAVPSDRGTQLRWFKEGGQLPPGHSVQDGVLRIQNLDQSCQGTYICQAHGPWGKAQASAQLVIQALPSVLINIRTSVQTVVVGHAVEFECLALGDPKPQVTWSKVGGHLRPGIVQS-GGVVRIAHVELADAGQYRCTATNAAGTTQSHVLLLVQALPQISMPQ-EVRVPAGSAAVFPCIASGYPTPDISWSKLDGS-LPPDSRLENNMLMLPSVRPQDAGTYVCTATNRQGKVKAFAHLQVPERVVPYFTQTPYSFLPLPTIKDAYRKFEIKITFRPDSADGMLLYNGQKRVPGSPTNLANRQPDFISFGLVGGRPEFRFDAGSGMATIRHPTPLALGHFHTVTLLRSLTQGSLIVGDLAPVNGTSQGKFQGLDLNEELYLGGYPDYGAI-PKAGLSSGFIGCVRELRIQGEEIVFHDLNLTAHGISHCPTCRDRPCQNGGQCH-DSESSSYVCVCPAGFTGSRCEHSQALHCHPEACGPDATCVNRPDGRGYTCRCHLGRSGLRCEEGVTVTTPSLSGAGSYLALPALTNTHHELRLDVEFKPLAPDGVLLFSGGKSGPVEDFVSLAMVGGHLEFRYELGSGLAVLRSAEPLALGRWHRVSAERLNKDGSLRVNGGRPVLRSSPGKSQGLNLHT--LLYLGGVEPSVPLSPATNMSAHFRGCVGEVSVNGKRLDLTYSFLGSQGIGQCYDS-SPCERQPCQHGATCMPAGEYEFQCLCRDGFKGDLCEHEENPCQLREPCLHGGTCQGTR------CLCLPGFSGPRCQQGSGHGIAESDWHLEGSGGNDAPGQYGAYFHDDGFLAFPGHVFSRSLPEVPETIELEVRT-STASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGEARLVSEDPINDGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRAQAGANTRPC 4389 HSP 2 Score: 166.777 bits (421), Expect = 4.955e-41 Identity = 191/861 (22.18%), Postives = 336/861 (39.02%), Query Frame = 3
Query: 75 GLSPIVSLEPKFATVVEGHNLTIQCNVTGKPVPIILWSKPYGWLSHNHIVTGNELKILKASPEDGGTYVCSGQNKLGTESQRSVISVERR--------VLPKLATDAPDKTTYVGDTTFFVCSVLEGIPRPLVFWKSARGYRVPQSYVKETDDGKVI---LTFKKVWTILAGSYTCVAMNTAGTTEISAELKVKG---------DPRILVRPRGIYRVTNGDKVQIECISYGAPTPSIILKFPSNFNQSARNEMEFTKRKGFMKFEFTADERFSGNFTCISRNRLGQKTEWVQIIVNKEDTLPQTT-------IQQSKMTARLGERISIPCLVTGIPNPTVHWTKEDDTESISNE---PVLWFDSISHKDGGEYHCNAENRQGKSRVSVIL--------EVIVP-----PIVHVTPSNLVVRKGYSFNLKCDAIGSPKPIIEWRKLNHTEMPSSLLVSDTELVSISASTEYTGAYVCSAKNIHGEEKAFANISV-------------VEPPWVEAVGPNVIRTNLTTNITLECKTTGDPQPALKWFKPLRSTGSMDTLTG-KFIIKSLSKYDQGQYRCQASNLGGVAEE-----------------RFNIIINELPKVYIEEGLTVSVIAESEFTFNC--HGQGTPMPELRWTKITGNLSKDVVASPDGTLY-FPKVTSADEGRYRCIGRNEYGSVIAEIQLSVEGAPKIT-YSTPSLTVNMKESAKLYCNVTGSPKPKVTWFKLHSTEM---PKYFYIKDGYFMIPI--VEYTDGGIFICRAQNSEGVAEAKVELKVN-----EFIPQFNSTKKSMIVYDRIINTLYKT---SIKLSIKPQSLHGLLLYSGQLEKDFISI 2384
G++P V +E + V EG L + C V G+ + W K G L H V G+ L++L+ +P D G YVC GT+ ++++++R V + ++ + G T C V P + ++K RG +P + +++ L +V +G Y C N AG+ E S + ++G P I + V G + + C+ P +II + + +R++ + + + AD SG + C + N + + I V+ P I+ S GE + + C+V G + V W K + ++ L +S D GEY C G SV++ V VP P + + PS+ V +G + +LKC G + W K +P+ V L S +G Y C G +A +++ +P ++EA +V + L C G + W+K S + G + + +S D G+Y C+A++ G +E R +I + P +++G + +F C H P+ L W L +V SP+G++ ++ G YRC+ N YG + + LSV G P ++ + V + ++ L C G P+ W ++ ST + + + D + ++ I + +D G ++C AQN+ G A+ +VE+ V+ PQ + + + V TL + S +I L L + +LE D + I
Sbjct: 2434 GVTPTVRIESSSSQVAEGQTLDLNCLVAGQAHAQVTWHKRGGSLPARHQVHGSRLRLLQVTPADSGEYVCRVVGSSGTQEASVLVTIQQRLSGSHSQGVAYPVRIESSSASLANGHTLDLNCLVASQAPHTITWYK--RGGSLPSRH-------QIVGSRLRIPQVTPADSGEYVCHVSNGAGSRETSLIVTIQGSGSSHVPSVSPPIRIE-SSSPTVVEGQTLDLNCVVARQPQ-AIITWYKRGGSLPSRHQTHGSHLR--LHQMSVAD---SGEYVCRANNNIDALEASIVISVSPSAGSPSAPGSSMPIRIESSSSHVAEGETLDLNCVVPGQAHAQVTWHKRGGSLPSHHQTRGSRLRLHHVSPADSGEYVCRVMGSSGPLEASVLVTIEASGSSAVHVPAPGGAPPIRIEPSSSRVAEGQTLDLKCVVPGQAHAQVTWHKRG-GNLPARHQVHGPLLRLNQVSPADSGEYSCQVTGSSGTLEASVLVTIEPSSPGPIPAPGLAQPIYIEASSSHVTEGQ---TLDLNCVVPGQAHAQVTWYKRGGSLPARHQTHGSQLRLHLVSPADSGEYVCRAASGPGPEQEASFTVTVPPSEGSSYRLRSPVISIDPPSSTVQQG--------QDASFKCLIHDGAAPI-SLEWKTRNQELEDNVHISPNGSIITIVGTRPSNHGTYRCVASNAYGVAQSVVNLSVHGPPTVSVLPEGPVWVKVGKAVTLECVSAGEPRSSARWTRISSTPAKLEQRTYGLMDSHAVLQISSAKPSDAGTYVCLAQNALGTAQKQVEVIVDTGAMAPGAPQVQAEEAELTVEAGHTATLRCSATGSPAPTIHWSKLRSPLPWQHRLEGDTLII 3265 HSP 3 Score: 152.14 bits (383), Expect = 1.200e-36 Identity = 175/783 (22.35%), Postives = 291/783 (37.16%), Query Frame = 3
Query: 81 SPIVSLEPKFATVVEGHNLTIQCNVTGKPVPIILWS-KPYGWLSHNHIVTGNELKILKASPEDGGTYVCSGQNKLGTESQRSVISVERRVLPKLATDAPDKTTYVGDTTFFVCSVLEGIPRPLVFWKSARGYRVPQSYVKETDDGKVILTFKKVWTILAGSYTCVAMNTAGTTEISAELKVKGDPRILVRPRGIY----RVTNGDKVQIECISYGAPTPSIILKFPSNFNQSARNEMEFTKRKGFMKFEF----------TADERFSGNFTCISRNRLGQKTEWVQI-IVNKEDTLPQTT----------IQQSKMTARLGERISIPCLVTGIPNPTVHWTKEDDTESISNE---PVLWFDSISHKDGGEYHCNAENRQGKSRVSVILEV---IVP---PIVHVTPSNLVVRKGYSFNLKCDAIGSPKPIIEWRKLNHTEMPSSLLVSDTELVSISASTEYTGAYVCSAKNIHGEEKAF---------ANISV----VEPPWVEAVGPNVIRTNLTTNITLECKTTGDPQPALKWFKPLRSTGSMDTLTGKFI-IKSLSKYDQGQYRCQASNLGGVAEERFNIIINELPKVYIEE-GLTVSVIAESE---------FTFNCHGQGTPMPELRWTKITGNLSKDVVASPDGTLYFPKVTSADEGRYRC--IGRN--EYGSVIAEIQLSVEGAPKITYSTP------SLTVNMKESAKLYCNVTGSPKPKVTWFKLHSTEMPKYFYIKDGYFMIPIVEYTDGGIFICRAQNSEGVAEAKVELKVN 2222
+P+VS+ P TV G +C+ TG P P + W+ P G L + G L++ P D Y+C + G + R+V+ V P++ + G T C G+P + W+ G PQ+ + TD +++ + T AG Y CVA + AGT + ++ V P I VT G + + C+ G SA ++ + +R G + SG + C N G K + + +++ + P T I+ S G+ + + C+V G + V W K + ++ +L ++ D GEY C+ G SV++ + ++P P V + S+ V +G + +L C G + W K + +P+ V + L AS G YVC A N G E + AN++ +P +E P+ + + L C G + W K S G + + S D G+Y C+ LG ++++ P + G+T +V ES NC G ++ W K G+L L +VT AD G Y C +G + + SV+ IQ + G+ + P S ++ + L C V +TW+K +P I IP V D G ++C N G E + + +
Sbjct: 1865 APVVSIHPPQLTVQPGQLAEFRCSATGSPTPTLEWTGGPGGQLPAKAQIHGGILRLPAVEPTDQAQYLCRAHSSAGQQVARAVLHVHGGGGPRVQVSPERTQVHAGRTVRLYCRA-AGVPSATITWRKEGGSLPPQARSERTDIATLLI--PAITTADAGFYLCVATSPAGTAQARIQVVVLSASDASPPPVKIESSSPSVTEGQTLDLNCVVAG----------------SAHAQVTWYRRGGSLPPHTQVHGSRLRLPQVSPADSGEYVCRVENGSGPKEASITVSVLHGTHSGPSYTPVPGSTRPIRIEPSSSHVAEGQTLDLNCVVPGQAHAQVTWHKRGGSLPARHQTHGSLLRLHQVTPADSGEYVCHVVGTSGPLEASVLVTIEASVIPGPIPPVRIESSSSTVAEGQTLDLSCVVAGQAHAQVTWYKRGGS-LPARHQVRGSRLYIFQASPADAGQYVCRASN--GMEASITVTVTGTQGANLAYPAGSTQPIRIE---PSSSQVAEGQTLDLNCVVPGQSHAQVTWHKRGGSLPVRHQTHGSLLRLYQASPADSGEYVCRV--LGSSVPLEASVLVTIEPAGSVPALGVTPTVRIESSSSQVAEGQTLDLNCLVAGQAHAQVTWHKRGGSLPARHQVH-GSRLRLLQVTPADSGEYVCRVVGSSGTQEASVLVTIQQRLSGSHSQGVAYPVRIESSSASLANGHTLDLNCLVASQAPHTITWYK-RGGSLPSRHQIVGSRLRIPQVTPADSGEYVCHVSNGAGSRETSLIVTIQ 2618 HSP 4 Score: 147.902 bits (372), Expect = 2.675e-35 Identity = 168/780 (21.54%), Postives = 290/780 (37.18%), Query Frame = 3
Query: 87 IVSLEPKFATVVEGHNLTIQCNVTGKPVPIILWSK------PYGWLSHNHIVTGNELKILKASPEDGGTYVCSGQNKLGTESQRSVISVERRVLPKLATDAPDKTTYV------------GDTTFFVCSVLEGIPRPLVFWKSARGYRVPQSYVKETDDGKVILTFKKVWTILAGSYTCVAMNTAGTTEISAELKVKGD-----PRILVRPRGIYRVTNGDKVQIECISYGAPTPSIILKFPSNFNQSARNEMEFTKRKGFMKFEFTADERFSGNFTCISRNRLGQKTEWVQIIVNKEDTLPQTTIQQSKMTARLGERISIPCLVTGIPNPTVHWTKEDDT------ESISNEPVLWFDSISHKDGGEYHCNAENRQGKSRVSVILEVI-----VPPIVHVTPSNLVVRKGYSFNLKCDAIGSPKPIIEWRKLNHTEMPSSLLVSDTELVSISASTEYTGAYVCSAKNIHGEEKAFANISVVE-----PPWVEAVG--------PNVIRTNLTTNITLECKTTGDPQPALKWFKPLRSTGSMDTLTGKFI-IKSLSKYDQGQYRCQASNLGGVAEERF------NIIINELPKVYIEEGLTVSVIAESE-FTFNCHGQGTPMPELRWTKITGNLS--KDVVASPDGTLYFPKVTSADEGRYRCIGRNEYGSVIAEIQLSVEGAPKITYSTP------------SLTVNMKESAKLYCNVTGSPKPKVTWFKLHSTEMPKYFYIKDGYFMIPIVEYTDGGIFICRAQNSEGVAEAKVELKV 2219
+V + P + V +G + +++C V+G P WS+ P G + G+EL P D G Y+C+ +N + + R+ + L T+AP K V G F+C+ P + W ++P + D ILT + V AG+Y C N + +A L V+ P + + P + V G + C + G+PTP++ A+ ++ G ++ + + C + + GQ+ + V+ P+ + + G + + C G+P+ T+ W KE + ++ L +I+ D G Y C A + G ++ + + V+ PP V + S+ V +G + +L C GS + W + + +P V + L S +G YVC +N G ++A +SV+ P + G P+ + L C G + W K S + G + + ++ D G+Y C G E ++I +P V IE + S +AE + +C G ++ W K G+L V S LY + + AD G+Y C N + A I ++V G + P S V ++ L C V G +VTW K +P + D G ++CR S EA V + +
Sbjct: 1678 VVEVHPARSIVPQGGSHSLRCQVSGSPPHYFYWSREDGRPVPSGTQQRHQ---GSELHFPSVQPSDAGVYICTCRNLHQSNTSRAEL---------LVTEAPSKPITVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPTRAM----DFNGILTIRNVQLSDAGTYVCTGSNMFAMDQGTATLHVQASGTLSAPVVSIHPPQL-TVQPGQLAEFRCSATGSPTPTLEWTGGPGGQLPAKAQIH----GGILRLP-AVEPTDQAQYLCRAHSSAGQQVARAVLHVHGGGG-PRVQVSPERTQVHAGRTVRLYCRAAGVPSATITWRKEGGSLPPQARSERTDIATLLIPAITTADAGFYLCVATSPAGTAQARIQVVVLSASDASPPPVKIESSSPSVTEGQTLDLNCVVAGSAHAQVTWYRRGGS-LPPHTQVHGSRLRLPQVSPADSGEYVCRVENGSGPKEASITVSVLHGTHSGPSYTPVPGSTRPIRIEPSSSHVAEGQTLDLNCVVPGQAHAQVTWHKRGGSLPARHQTHGSLLRLHQVTPADSGEYVCHVVGTSGPLEASVLVTIEASVIPGPIPPVRIES--SSSTVAEGQTLDLSCVVAGQAHAQVTWYKRGGSLPARHQVRGS---RLYIFQASPADAGQYVCRASN---GMEASITVTVTGTQGANLAYPAGSTQPIRIEPSSSQVAEGQTLDLNCVVPGQSHAQVTWHK-RGGSLPVRHQTHGSLLRLYQASPADSGEYVCRVLGSSVPLEASVLVTI 2424 HSP 5 Score: 137.117 bits (344), Expect = 4.427e-32 Identity = 176/783 (22.48%), Postives = 288/783 (36.78%), Query Frame = 3
Query: 75 GLSPIVSLEPKFATVVEGHNLTIQCNVTGKPVPIILWSKPYGWLSHNHIVTGNELKILKASPEDGGTYVCSGQNKLGTESQRSVISVERRVL--PKLATDA----PDKTTYVGDTTFFVCSVLEGIPRPLVFWKSARGYRVPQSYVKETDDGKVILTFKKVWTILAGSYTCVAMNTAGTTEISAELKVKGD---PRILVRP-----RGIYRVTNGDKVQIECISYGAPTPSIILKFPSNFNQSARNEMEFTKRKGFMKFEFTADERFSGNFTCISRNRLGQKTEWVQIIVNKEDTLPQTT-------IQQSKMTARLGERISIPCLVTGIPNPTVHWTKEDDTESISNEPV---LWFDSISHKDGGEYHCNAENRQGKSRVSVILEV---------IVPPIVHVTPSNLVVRKGYSFNLKCDAIGSPKPIIEWRKLNHTEMPSSLLVSDTELVSISASTEYTGAYVCSAKNIHGEEKAFANISVVEPPWVEAVGPNV-----------IRTNLTTN-------ITLECKTTGDPQPALKWFKPLRSTGSMDTLTG-KFIIKSLSKYDQGQYRCQASNLGGVAEERFNIIINE-------------LPKVYIEEGLTVSVIAESE-FTFNCHGQGTPMPELRWTKITGNL-SKDVVASPDGTLYFPKVTSADEGRYRCIGRNEYGSVIAEIQLSVEGAPKITYSTPSLT-----------VNMKESAKLYCNVTGSPKPKVTWFKLHSTEMPKYFYIKDGYFMIPIVEYTDGGIFICRAQNSEG 2189
G P V +E +TV EG L + C V G+ + W K G L H V G+ L I +ASP D G YVC N + +V + L P +T P + T + V+ G V W RG +P V+ G +L + +G Y C + ++ E S + ++ P + V P +V G + + C+ G + + AR+++ ++ + T + SG + C G + V + + + + + I+ S + G + + CLV T+ W K + ++ V L ++ D GEY C+ N G S+I+ + V P + + S+ V +G + +L C P+ II W K + +PS + L S +G YVC A N NI +E V +V P+ IR +++ + L C G + W K S S G + + +S D G+Y C+ G E + I P + IE + S +AE + C G ++ W K GNL ++ V P L +V+ AD G Y C G++ A + +++E + P L V ++ L C V G +VTW+K +P + +V D G ++CRA + G
Sbjct: 2242 GPIPPVRIESSSSTVAEGQTLDLSCVVAGQAHAQVTWYKRGGSLPARHQVRGSRLYIFQASPADAGQYVCRASNGMEASITVTVTGTQGANLAYPAGSTQPIRIEPSSSQVAEGQTLDLNCVVPGQSHAQVTWHK-RGGSLP---VRHQTHGS-LLRLYQASPADSGEYVCRVLGSSVPLEASVLVTIEPAGSVPALGVTPTVRIESSSSQVAEGQTLDLNCLVAGQAHAQVTWHK-RGGSLPARHQVHGSR---LRLLQVTPAD--SGEYVCRVVGSSGTQEASVLVTIQQRLSGSHSQGVAYPVRIESSSASLANGHTLDLNCLVASQAPHTITWYKRGGSLPSRHQIVGSRLRIPQVTPADSGEYVCHVSNGAGSRETSLIVTIQGSGSSHVPSVSPPIRIESSSPTVVEGQTLDLNCVVARQPQAIITWYKRGGS-LPSRHQTHGSHLRLHQMSVADSGEYVCRANN---------NIDALEASIVISVSPSAGSPSAPGSSMPIRIESSSSHVAEGETLDLNCVVPGQAHAQVTWHKRGGSLPSHHQTRGSRLRLHHVSPADSGEYVCRVMGSSGPLEASVLVTIEASGSSAVHVPAPGGAPPIRIEP--SSSRVAEGQTLDLKCVVPGQAHAQVTWHKRGGNLPARHQVHGP--LLRLNQVSPADSGEYSCQVTGSSGTLEASVLVTIEPSSPGPIPAPGLAQPIYIEASSSHVTEGQTLDLNCVVPGQAHAQVTWYK-RGGSLPARHQTHGSQLRLHLVSPADSGEYVCRAASGPG 2998 HSP 6 Score: 132.88 bits (333), Expect = 8.674e-31 Identity = 173/779 (22.21%), Postives = 285/779 (36.59%), Query Frame = 3
Query: 84 PIVSLEPKFATVVEGHNLTIQCNVTGKPVPIILWSKPYGWLSHNHIVTGNELKILKASPEDGGTYVCSGQNKLGTESQRSVISVERRVLPKLA-TDAPDKTTYV-----------GDTTFFVCSVLEGIPRPLVFWKSARGYRVPQSYVKETDDGKVILTFKKVWTILAGSYTCVAMNTAGTTEISA----ELKVKGDPRILVR-PRGIYRVTNGDKVQIECISYGAPTPSIILKFPSNFNQSARNEMEFTKRKGFMKFEFTADERFSGNFTCISRNRLGQK-------TEWVQIIVNKEDTLPQTTIQQSKMTARLGERISIPCLVTGIPNPTVHWTKEDDTESISNE---PVLWFDSISHKDGGEYHCNAENRQGKSRVSVILEVI---------VPPIVHVTPSNLVVRKGYSFNLKCDAIGSPKPIIEWRKLNHTEMPSSLLVSDTELVSISASTEYTGAYVCSAKNIHGEEKAFANISVVE------------PPWVEAVGPNVIRTNLTTNITLECKTTGDPQPALKWFKPLRSTGSMDTLTG-KFIIKSLSKYDQGQYRCQASNLGGVAEERFNIII-----NELPKVYIE---EGLTVSVIAESEFTFNCHGQGTPMPELRWTKITGNLSKDVVASPDGTLYFPKVTSADEGRYRCIGRNEYGSVIAEIQLSVE---GAPK-------ITYSTPSLTVNMKESAKLYCNVTGSPKPKVTWFKLHSTEMPKYFYIKDGYFMIPIVEYTDGGIFICRAQNSEGVAEAKVELKV 2219
P V +E +V EG L + C V G + W + G L + V G+ L++ + SP D G YVC +N G + +SV + T P T + G T C V+ G V W RG +P + +L +V +G Y C + T+G E S E V P VR V G + + C+ G + + + AR+++ +G + F A +G + C + N + T+ + T P I+ S G+ + + C+V G + V W K + + ++ +L S D GEY C SV++ + V P V + S+ V +G + +L C G + W K + +P+ V + L + + +G YVC G ++A +++ + P +E+ ++ + + L C + W+K S S + G + I ++ D G+Y C SN G E + I + +P V E + +V+ NC P + W K G+L L +++ AD G Y C N ++ A I +SV G+P I + S V E+ L C V G +VTW K +P + + + V D G ++CR S G EA V + +
Sbjct: 2051 PPVKIESSSPSVTEGQTLDLNCVVAGSAHAQVTWYRRGGSLPPHTQVHGSRLRLPQVSPADSGEYVCRVENGSGPKEASITVSVLHGTHSGPSYTPVPGSTRPIRIEPSSSHVAEGQTLDLNC-VVPGQAHAQVTWHK-RGGSLPARHQTHGS----LLRLHQVTPADSGEYVCHVVGTSGPLEASVLVTIEASVIPGPIPPVRIESSSSTVAEGQTLDLSCVVAGQAHAQVTW-YKRGGSLPARHQV-----RGSRLYIFQASPADAGQYVCRASNGMEASITVTVTGTQGANLAYPAGSTQP-IRIEPSSSQVAEGQTLDLNCVVPGQSHAQVTWHKRGGSLPVRHQTHGSLLRLYQASPADSGEYVCRVLGSSVPLEASVLVTIEPAGSVPALGVTPTVRIESSSSQVAEGQTLDLNCLVAGQAHAQVTWHKRGGS-LPARHQVHGSRLRLLQVTPADSGEYVCRVVGSSGTQEASVLVTIQQRLSGSHSQGVAYPVRIESSSASLANGH---TLDLNCLVASQAPHTITWYKRGGSLPSRHQIVGSRLRIPQVTPADSGEYVCHVSNGAGSRETSLIVTIQGSGSSHVPSVSPPIRIESSSPTVVEGQTLDLNCVVARQPQAIITWYKRGGSLPSRHQTH-GSHLRLHQMSVADSGEYVCRANNNIDALEASIVISVSPSAGSPSAPGSSMPIRIESSSSHVAEGETLDLNCVVPGQAHAQVTWHK-RGGSLPSHHQTRGSRLRLHHVSPADSGEYVCRVMGSSGPLEASVLVTI 2810 HSP 7 Score: 130.183 bits (326), Expect = 5.586e-30 Identity = 175/798 (21.93%), Postives = 281/798 (35.21%), Query Frame = 3
Query: 90 VSLEPKFATVVEGHNLTIQCNVTGKPVPIILWSKPYGWLSHNHIVTGNELKILKASPEDGGTYVCSGQNKLGTESQRSVISVERRV----LPKLATDAPDKTTYVGDTTFFVCSVLEGIPRPLVFWKSARGYRVPQSYVKETDDGKVILTFKKVWTILAGSYTCVAMN---------TAGTTEISAELKVKGDPRILVRPRGIYRVTNGDKVQIECISYGAPTPSIILKFPSNFNQSARNEMEFTKRKGFMKFE----------FTADERFSGNFTCISRNRLGQKTEW-VQIIVNKEDT--------LPQTTIQQSKMTARLGERISIPCLVTGIPNPTVHWTKEDDTESISNE---PVLWFDSISHKDGGEYHCNAENRQGKSRVSVILEVI----------VPPIVHVTPSNLVVRKGYSFNLKCDAIGSPKPIIEWRKLNHTEMPSSLLVSDTELVSISASTEYTGAYVCSAKNIHGEEK----------AFANISVVEPP-WVEAVGPNVIRTNLTTNITLECKTTGDPQPALKWFKPLRSTGSMDTLTGKFI-IKSLSKYDQGQYRCQASNLGGVAEERFNIIINELPK------------VYIEEGLTVSVIAESE-FTFNCHGQGTPMPELRWTKITGNLSKDVVASPDGTLYFPKVTSADEGRYRCIGRNEYGSVIAEIQLSVE-------------GAPKITYSTPSLTVNMKESAKLYCNVTGSPKPKVTWFKLHSTEMPKYFYIKDGYFMIPIVEYTDGGIFICRAQNSEGVAEAKVELKVNEFIP 2234
+ +EP + V EG L + C V G+ + W K G L H G+ L++ + +P D G YVC G ++++E V +P + ++ T G T C V+ G V W RG +P + G + F+ AG Y C A N GT + I + P +V G + + C+ G + ++ + KR G + + A SG + C LG ++V E P I+ S G+ + + CLV G + V W K + ++ L ++ D GEY C G SV++ + V V + S+ + G++ +L C I W K + +PS + + L + +G YVC N G + +++ V PP +E+ P V+ + L C PQ + W+K S S G + + +S D G+Y C+A+N + +I+I+ P + IE + S +AE E NC G ++ W K G+L L V+ AD G Y C G + A + +++E GAP I S V ++ L C V G +VTW K +P + + V D G + C+ S G EA V + + P
Sbjct: 2154 IRIEPSSSHVAEGQTLDLNCVVPGQAHAQVTWHKRGGSLPARHQTHGSLLRLHQVTPADSGEYVCHVVGTSGPLEASVLVTIEASVIPGPIPPVRIESSSSTVAEGQTLDLSC-VVAGQAHAQVTWYK-RGGSLP---ARHQVRGSRLYIFQAS-PADAGQYVCRASNGMEASITVTVTGTQGANLAYPAGSTQPIRIEPSS-SQVAEGQTLDLNCVVPG----------------QSHAQVTWHKRGGSLPVRHQTHGSLLRLYQASPADSGEYVC---RVLGSSVPLEASVLVTIEPAGSVPALGVTPTVRIESSSSQVAEGQTLDLNCLVAGQAHAQVTWHKRGGSLPARHQVHGSRLRLLQVTPADSGEYVCRVVGSSGTQEASVLVTIQQRLSGSHSQGVAYPVRIESSSASLANGHTLDLNCLVASQAPHTITWYKRGGS-LPSRHQIVGSRLRIPQVTPADSGEYVCHVSNGAGSRETSLIVTIQGSGSSHVPSVSPPIRIESSSPTVVEGQ---TLDLNCVVARQPQAIITWYKRGGSLPSRHQTHGSHLRLHQMSVADSGEYVCRANN--NIDALEASIVISVSPSAGSPSAPGSSMPIRIES--SSSHVAEGETLDLNCVVPGQAHAQVTWHKRGGSLPSHHQTR-GSRLRLHHVSPADSGEYVCRVMGSSGPLEASVLVTIEASGSSAVHVPAPGGAPPIRIEPSSSRVAEGQTLDLKCVVPGQAHAQVTWHK-RGGNLPARHQVHGPLLRLNQVSPADSGEYSCQVTGSSGTLEASVLVTIEPSSP 2915 HSP 8 Score: 117.472 bits (293), Expect = 4.184e-26 Identity = 171/793 (21.56%), Postives = 294/793 (37.07%), Query Frame = 3
Query: 72 SGLSPIVSLEPKFATVVEGHNLTIQCNVTGKPVPIILWSKPYGWLSHNHIVTGNELKILKASPEDGGTYVCSGQNKLGTESQRSVISVERR-------VLPKLATDAPDKTTYVGDTTFFVCSVLEGIPRPLVFWKSARGYRVPQSYVKETDDGKVILTFKKVWTILAGSYTCVAMNTAGTTEISAELKVK-----GDPRILVRPRGI----YRVTNGDKVQIECISYGAPTPSIILKFPSNFNQSARNEMEFTKRKGFMKFEFTADERFSGNFTCISRNRLGQKTEWVQIIVNKEDT------LPQTTIQQSKMTARLGERISIPCLVTGIPNPTVHWTKED---DTESISNEPVLWFDSISHKDGGEYHCNAENRQGKSRVSVILEV------------IVPPIVHVTPSNLVVRKGYSFNLKCDAIGSPKPIIEWRKLNHTEMPSSLLVSDTELVSISASTEYTGAYVCSAKNIHG----------EEKAFANISVVEP---PWVEAVGPNVIRTNLTTNITLECKTTGDPQPALKWFKPLRSTGSMDTLTGKFI-IKSLSKYDQGQYRCQASNLGGVAEERFNIII-----NELPK------VYIEEGLTVSVIAESE-FTFNCHGQGTPMPELRWTKITGNLSKDVVASPDGTLYFPKVTSADEGRYRC-----IGRNEYGSVIAEIQLSVEG------APKITYSTPSLTVNMKESAKLYCNVTGSPKPKVTWFKLHSTEMPKYFYIKDGYFMIPIV--EYTDGGIFICRAQNSEGVAEAKVELKVN 2222
+G + + +EP + V EG L + C V G+ + W K G L H G+ L++ +ASP D G YVC ++++E V P + ++ G T C ++ G V W RG +P + L +V +G Y C + ++GT E S + ++ + + P I + NG + + C+ + P I + + +R+++ ++ + + AD SG + C N G + + + + + P I+ S T G+ + + C+V P + W K + ++ L +S D GEY C A N S+++ V +P + + S+ V +G + +L C G + W K + +PS + L S +G YVC G E + + V P P + + P+ R + L+C G + W K + + + G + + +S D G+Y CQ + G E + I +P +YIE + S + E + NC G ++ W K G+L L V+ AD G Y C G + S + S EG +P I+ PS TV + A C + P +K + E+ +I +I IV ++ G + C A N+ GVA++ V L V+
Sbjct: 2337 AGSTQPIRIEPSSSQVAEGQTLDLNCVVPGQSHAQVTWHKRGGSLPVRHQTHGSLLRLYQASPADSGEYVCRVLGSSVPLEASVLVTIEPAGSVPALGVTPTVRIESSSSQVAEGQTLDLNC-LVAGQAHAQVTWHK-RGGSLPARHQVHGSR----LRLLQVTPADSGEYVCRVVGSSGTQEASVLVTIQQRLSGSHSQGVAYPVRIESSSASLANGHTLDLNCL-VASQAPHTITWYKRGGSLPSRHQIVGSRLR--IPQVTPAD---SGEYVCHVSNGAGSRETSLIVTIQGSGSSHVPSVSPPIRIESSSPTVVEGQTLDLNCVVARQPQAIITWYKRGGSLPSRHQTHGSHLRLHQMSVADSGEYVCRANNNIDALEASIVISVSPSAGSPSAPGSSMP--IRIESSSSHVAEGETLDLNCVVPGQAHAQVTWHKRGGS-LPSHHQTRGSRLRLHHVSPADSGEYVCRVMGSSGPLEASVLVTIEASGSSAVHVPAPGGAPPIR-IEPSSSRVAEGQTLDLKCVVPGQAHAQVTWHKRGGNLPARHQVHGPLLRLNQVSPADSGEYSCQVTGSSGTLEASVLVTIEPSSPGPIPAPGLAQPIYIEA--SSSHVTEGQTLDLNCVVPGQAHAQVTWYKRGGSLPARHQTH-GSQLRLHLVSPADSGEYVCRAASGPGPEQEASFTVTVPPS-EGSSYRLRSPVISIDPPSSTVQQGQDASFKCLIHDGAAPISLEWKTRNQELEDNVHISPNGSIITIVGTRPSNHGTYRCVASNAYGVAQSVVNLSVH 3109 HSP 9 Score: 117.087 bits (292), Expect = 6.761e-26 Identity = 97/376 (25.80%), Postives = 152/376 (40.43%), Query Frame = 3
Query: 1167 VPPIVHVTPSNLVVRKGYSFNLKCDAIGSPKPIIEWRKLNHTEMPSSLLV--SDTELVSISASTEYTGAYVCSAKNIHGEEKAFANISVVEPP------WVEAVGPNVIRTNLTTNITLECKT-TGDPQPALKWFK------PLRSTGSMDTLTGKFIIKSLSKYDQGQYRCQASNLGGVAEERFNIIIN-----ELPKVYIEEG-LTVSVIAESEFTFNCHGQGTPMPELRWTKITGNLSKDVVASPDGTLYFPKVTSADEGRYRCIGRNEYGSVIAEIQLSVE--GAPKITYSTPSLTVNMKESAKLYCNVTGSPKPKVTWFKLHSTEMPKYFYIKD--GYFMIPIVEYTDGGIFICRAQNSEGVAEAKVELKV 2219
P +V V P+ +V +G S +L+C GSP W + + +PS +EL S G Y+C+ +N+H + A + V E P VE +R ++T C + P L W + P R +MD G I+++ D G Y C SN+ + + + + P V I LTV +E F C G+P P L WT G G L P V D+ +Y C + G +A L V G P++ S V+ + +LYC G P +TW K + P+ + +IP + D G ++C A + G A+A++++ V
Sbjct: 1675 APLVVEVHPARSIVPQGGSHSLRCQVSGSPPHYFYWSREDGRPVPSGTQQRHQGSELHFPSVQPSDAGVYICTCRNLHQSNTSRAELLVTEAPSKPITVTVEEQRSQSVRPG--ADVTFICTAKSKSPAYTLVWTRLHNGKLPTR---AMD-FNGILTIRNVQLSDAGTYVCTGSNMFAMDQGTATLHVQASGTLSAPVVSIHPPQLTVQPGQLAE--FRCSATGSPTPTLEWTGGPGGQLPAKAQIHGGILRLPAVEPTDQAQYLCRAHSSAGQQVARAVLHVHGGGGPRVQVSPERTQVHAGRTVRLYCRAAGVPSATITWRKEGGSLPPQARSERTDIATLLIPAITTADAGFYLCVATSPAGTAQARIQVVV 2042 HSP 10 Score: 98.9821 bits (245), Expect = 1.818e-20 Identity = 71/257 (27.63%), Postives = 108/257 (42.02%), Query Frame = 3
Query: 1494 TLECKTTGDPQPALKWFK----PLRSTGSMDTLTGKFIIKSLSKYDQGQYRCQASNLGGVAEERFNIIINELPK----VYIEEGLTVSVIAESEFTFNCHGQG-TPMPELRWTKITGNLSKDVVASPDGTLYFPKVTSADEGRYRCIGRNEY----GSVIAEIQLS-VEGAPKITYSTPSLTVNMKESAKLYCNVTGSPKPKVTWFKLHSTEMPKYFYIKDGYFMIPIVEYTDGGIFICRAQNSEGVAEAKVELKVN 2222
+L C+ +G P W + P+ S + S+ D G Y C NL R +++ E P V +EE + SV ++ TF C + +P L WT++ +G L V +D G Y C G N + G+ +Q S AP ++ P LTV + A+ C+ TGSP P + W ++P I G +P VE TD ++CRA +S G A+ L V+
Sbjct: 1695 SLRCQVSGSPPHYFYWSREDGRPVPSGTQQRHQGSELHFPSVQPSDAGVYICTCRNLHQSNTSRAELLVTEAPSKPITVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPTRAMDFNGILTIRNVQLSDAGTYVCTGSNMFAMDQGTATLHVQASGTLSAPVVSIHPPQLTVQPGQLAEFRCSATGSPTPTLEWTGGPGGQLPAKAQIHGGILRLPAVEPTDQAQYLCRAHSSAGQQVARAVLHVH 1951 The following BLAST results are available for this feature:
BLAST of TCONS_00011089 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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