TCONS_00010303 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010303
Unique NameTCONS_00010303
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2726

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010303 ID=TCONS_00010303|Name=TCONS_00010303|organism=Clytia hemisphaerica|type=transcript|length=2726bp
GTTGTTTTCGATCAACTTACTAGGAAGAATGAACGTGTTCAGCAAATTTG
GAGAAACACTCCACTCAGTCGATGCGCATGCGCTATTGAAATCAATCGGT
CTTGAACAAATGATGTCAGATGCGCCAACAGACCATAAATATCTAGCCTA
CCTTAGTGGTGGAATCCTAGCTTCGGCTGCAGTATTATTTGTCGGTAACC
GTTTGTTTCATGATCGTCTTTCCAGTTGGAACCTACCAGGACCGAAAAGT
TCACTCCTGCCGATAGACCTGTTCAAAGGTCACAAAAACCAACACCAACT
ACACTTATTGTTAGACGACTATGTGAAAACTTACGGCGAAACTTTCGCTT
TTAATTACAAAGGACAGCCTGTTGTCGCAACGACAGACGAGGATATCATA
CATAAAATATTATGGAAAGAATTCCCAAACTTTGAAAACAGAAAGTTCTT
TGTCGAGATGCCGTGGCCTTGTCAACACATGGTAACCATGGCAAAAGGAG
CAAAGGCCAAAATGATCAGAAACCTTTTGAAAGCTGTATTAGACgccaaa
agtatcaaaaataaTTGGGCTCATTTTCAAGAAGCGAACCAGGACGTGGA
AGAGCTCTTGAGGGACGCCGCGTTAAACATGCTAGAAGTTAATTCGACAA
GTTTAGCAAATGGATATATCATGCAGATCATCACCAAGATGGCATTTTCG
CTTGATTGCTCCAACCAATCAGATCTCAACAAACAATTGGTCCAACTATC
ACACCTCTTTACTAGACCTCCAACATGGCTTCAAAGCTGTTCCAGTCTCC
CAATCATTGGAAACTTGTTGAAACTTTCCCCATGGGGATTTAACTCAAGT
TTGCATCAGTTCATAAAGATTGCAACAGACATTGTTGTGGAAAGACGCAA
AGAAAAGAATCGCGAACCACAGGATGTATTGGACGTTCTGTTAGCAGCAC
AATCCAAAGACTCCAACATCAGCACTGAAATTCTATTAGCTCAGGCTATT
GTTCTCCTCACTGTCGTCCACGCTTCAACCGCCACGACGATCTCCATAGC
AACCTATTATATCGCCAAACACAAAGATGTACAAAGGAGACTACAACAAG
AGATTGACAGTATCTCAATGGAAGATGGATTTCCATCTTGGGAACATCTA
CATAAACAGTTGCCATACCTTGGACAAGTTGTCAATGAAACTTTACGCCT
CTACCCGTCAGCCTTTATGTTGATGCGTGAATGTACAAAGCCAACAACAG
TCAATGGCATCTCCTTTGAAAAAGGTGACGGAGTTCTCATCCCAACCTAT
TCGATGCATCGAGATCCTAAAGTTTTCACTGATCCTGAACAATTCAATCC
AGACCGGTTCGAGACCAAACCATCAAGACATTATTATCCGTTCGGTGACG
GCTACCGTATGTGTCCGGGAAAAGAAATGGCTTTGTCCGAAATTAAAACC
TACTTAGCTTCGAtgttgaaaaactttgatttgTCACTTGTTGACGAGAA
CCAAGAATTATGCGTCAAATCATACATTTCAGCTCAAACCACAATGGCGG
TGGATGAACCAATCCAAATTCGTGTACAAAAAAGACGTCATTAGATGTAA
TTTATAATGTAACCAAGGATGTCCTATATCTACCATCGgttaaattttgc
agatttttcgaATCCATGGAAACAATTGATGATCTGTTTTCTGGATGTTA
TATCTCTGATCAACCTCTACACCAATACTTCATGACAAAGAGTACGAGTT
TACTTGTGTCTAATGACGGATGTTTGAAGTCATTGATGTGTTTTAATAGA
TACACTCTCTTGGACCCCCCTCCCCCTGACCCACTGGaaagtttttccaa
attttcgtccccggtagaaaaaaataccctaaaatttcaggCCTATTTGC
TTTTTTGACCgctaaaaacaaaagaattttattCCCCATTGGCGGGAGTT
CGATAGagattttatccccactgtgggaagaaTTTCTAACGGGGCTTAGT
GACAGAGGTGTAGATACAGATATTTGACTCCGATAAGTCCGAACACAACC
TTCTTGTGAATTTCGGGTTAACTGGTATATTCGGTTAATGAAAGACTGTA
TTAtagtatggcgcgccaaaaggctatttaatactaactttttttataat
accaacttttttttataatatcaactttttttataatatcaacttttttt
tttataataccaacttttttttttataaaaccaactttttttttatagta
ccaactttttttttagttcaaagttttttcataaCACCAATTTTTGTCTC
GCTTACTATGCGTGTATAATCGATCAAGTGTATTaaaatgaaagttggta
ttataaaaaaaaagttgatattataaaaaaagttggtattataaaaaaaa
gctggtattataaaaaaaagttagtattaaaaagcctttttggcGCGCCA
TATTATAGCCTCACATTCGTAACAAAAGTTGTGCAGGTATCATAACATAT
CCACATTAAAACGGAGTATGGGAGGTGTTGAAGAACCAAGAACTTTTGTA
TATGGTTCATTGCAGAAGAAAAAGTTGGTAATATTTTGTTTGGTTAAATT
CAAGAAGgaataaatttattttaaaaagacaattatTTCTTCATTATGTT
AATTGTAAATAATCATGCATATATATAATCTTTAATATggtgcttattaa
aaaaacacatGAATCTTAAAATAGCA
Run BLAST on NCBI

transcript from alignment at sc0000104:175374..190990-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010303 ID=TCONS_00010303|Name=TCONS_00010303|organism=Clytia hemisphaerica|type=transcript|length=15617bp|location=Sequence derived from alignment at sc0000104:175374..190990- (Clytia hemisphaerica)
GTTGTTTTCGATCAACTTACTAGGAAGGTAAACTCTTATTCTTGGGTACC
TAATAGCTGGGCTGGGGGGGGTGTCTTGGAATAAGCTGGGTTGGAATAAA
AATGTCTTGGGTGGAAAATTTTGAAAAAGAGTCTGATACAGCAGAATTAG
GACAAAGAGGGAACCTCCAAAAATTAATAAGCGGGAGGGGGGGAGGTTGG
AATAAGAATGTCCTGAGTGGAAAAAATTAATAAAGAGGGGGGCGGCCATT
AGGTACCCGAGAGTATGAAATCTCTTTGCGCTATTGATGGATAGTGTCGA
TATTTTGCATAGAAAGTCAAGTAATGAAGGACTTTCATAATTATAGACTA
TATGCTATAGTCTAAGACGAGAATTTTTTTCGGGGGTAGCTGTTGTCTTA
CACTATATCAACTCGGCAAAAACCGGAAATTTTGGATTTTGGTTATCGGT
GTCATCGGCCGGTCCGGTTCGAACAAATGTAAACAAACAGTCGGGTCTGA
TTGGTAAACTCCCCCCCCCCGCAATTCCTGCTGCTAATACAGATGGACCC
GACTAGAATAATGATTCCAAAACATGAAGACAGAAAGTTAATCTGTATGT
GTGAAAATGTTTTGTGCAATTCTTTACCATTTGAGTCTCTTAGCCTCCTA
TTTGTTAGTACTTTAGTTTGTAACTTCTTTGCAACAAGTAGTTTTATGTA
AATTGTTTGTTTTGAATTTATTTTTAATAAGCAGAACTCAGTTCAGATTC
AACTCGTAGAGGTAAGCAGTAAGGCTTTTTCTCTTTTATTTTTATTCTGA
AAGACTCATATTTTTGTAATACAAGCTTGTATTCGCCAGGTTTATCTTCA
GTGTACGTGGTATGTTTTGTCTGATTGCTCTAGGAAAATTTTATTAGAGT
GGGGGGCATTTTTCAATCACAGCTTTTTTACAAGTTTTTACAAGAAAATC
TTTTAATTTTTATAACAGGCATAGTTGTTGGTTTTGGTTTTTAGTCTACA
TATATTTGCTCAGGCAAGACCAATATAATTTGTGGTTTTTTTTATAGGCA
GTCTAACAGCAAAAATCAGTAATTATACCAAACTTGTGAAATCAAAGATT
ATAAAGGTACAGAATGGTGAAATGCAGTTTTATTGAAAAATTGAGCATAA
AATTCTGAAAAACTTGAGGAAGCATTTAAATTTTTGAATAAAGCAGTAGT
CTACTAGTGACTACTAACACACAGCAATTCTTTTAAATCACCATAATATT
TTGGGTTAATTTACCAGATTTCATTTTCACAATTGCAACTTTTTATGAAA
GTGAATTCTGTGGTGTCGTGATATAGACATTGATTTTGATTTTTTAAATT
TTAGCTTCAATCGGGCCCGTAAAACAACAAATCAAATTGGTCCCCAAGTA
TTGTCATATACTTATTACAATTTCGATAGTTATTAAAAATATAAAAGTTT
CAAAATAGTGAAAAATTATACAAGTAGCGATCTAAAAATTTTAAGTTGCT
ATTTTGCCCTACTGTATTCAAGATGGGCATGATATAAAGACATTATATTT
CATATTTACTTATGTTTATCATATTGAATCAAATGAATATTTCATTTTTG
GACCATATTTTATTAGACCTTGCGTTATTAATTTTTGGTAACGAAAGTCT
TAAACACAATGCATACCAATGCAAAATCTCTCACTCTTTAAAAAAAATAT
TGAAAGGAATTCTTCAAGGGTGATGGCAGATTTGTCATGCTAAAATCAAT
GTTGTATGGAATTTCTATCATATTTTTGGTTATCTATTTTTTTAATTTTG
AATAAAACAATTCATTTTTAAATGGGATTTTATGGGCTTGTCACTTGGAT
CATTTAAAAAAGAATATTTGAGTAAAGAAATTTAAAAAGTGGTTTTTACT
TTGAGTATTTTTTGGAAATCATCCGGTTCGGTCAAAAACGCAAATTGCAG
CATTTCACCTTGAATTACCCTAAAGTCAGGGGAAATTTTTATATCTTGCA
TTCTGTGTATGGTGTGATTGGGTAGCAGATAATTTTGCATTTCTCCAGAA
GAATGTGGAAATTTGAAGTGTACAATTTTTTCTAATGTCGTAGAAATGTG
TCCTAAAAGAATTTTTGGTTCAAATTTTCAATAGACCTGAGGCTTAGAAA
AGCTGTTTTAGAATGAACCAGCTGCTTGCTAAAAATATAGTCAAAATGAA
ACTTTTTGTTCAGATGTTATGCAGATGCTTGAGATGTTGTGGAAATGTTG
TTCAGATATCGCGGAGGGTATCTTTCAGTCATAATGTAAAGTGTTGTTCA
GTTATCGTGGAAAGAGTTGTTTAGATATATCGCAGAAAGTGTTGTTTAGA
CAAGGTGGAGGGTGTCGGTCTGATATCGTGAAAGATGTTGGTTGAATTTT
GTAGAAATGCATTGGTCGAAATATGCCACATAACCATATATGGTTTTGCT
GGTGGTATATACCACTGTACTGTCAACTGCTACCCCGTTCCTTCCTTGGA
TGTTTTTTTGTTTTGGTTTTCTTTCCCAAGTTCGGCAATAAATCTACGGG
ATTTTTTTCGCAAAAATCACCGACCCTTCTACAAGGTCGGTCAGGGCAAA
GTAAAATCAAGAAAAACGCCGAGTTGATATCGTCCGTAAACACAGACTCT
ATCCGCCGCGCATCATATTATGTTTTATAATATACAAACTATGTTATGTT
ATATCATAATAATATATTATACGGCCGATAGCATCGTCTACCATAATTAT
TGAGGAGGAAAACTTGATTTGTGATACTTTTTTATAAGAACAGCTAAAAT
CTTTGAAGCCTTTGGATGTGTTTTAAACTTTTCGAGTTTTAATGTTCTCA
ACATGTTCTTAATTTCGCCATTTTTTGAGTATTTTTGTTTAATTTTCTTA
AGAATCGGGTGTTTATCGGGTCTTAAAACTTTATTAATTTGTTCTTTAAA
TTTTGGCCATCGAAGCCTTATCCTTTTTAGTTTTAAAAAAGTGGAAAATT
GATGAGCATGTAGTATGTTATTTGATCACTAGAATTCCATGTAGGAATTC
ATGTTTCATCATAAAATTTGATATCTTGATGATGATGTTGTAAAATGATC
ACCCTACATTACTCTATGTACATTACTCTACACAAACAAGCGATTAAATT
GTCTTGTGCAAAAAAAAGGCTTTTGAGACTTCTTCGACAATCTTTGCTTC
AGGTACTTGCATATTGTTGTTCTTTTTAGCGTATGTATAGAATGGCGTAA
TTTGGGCACTGGCATTTGTATATAAAGGTCAGTCTTTCCATGATGGCGTA
ATGACGTTATAAAGATATTGGCGTGATATCTGAATCGGGAAAGATTTGAT
GGGTGATGCCTGATTTGGGTTATAATCGATATTCTTGCACAGTAAACAAA
TTTTTGTAAATTTTTATGAGGTCAAAATATTTGGGCGCGCTAATTTTCTT
CTAATTATTACGCTTAGTCATGAAAAGTTAGACTAGGAGCAATATTTTTA
TATTAAGGATGGAATCCTTGTCAAAATGAAAGAGTATTGAACATTGAGGA
ATGGAGCTGCCAGTACTGCGGGGACGTGTAGAAATACAAGCTCAAGGTTA
CACAAAAGATTGGTTAGCAGTTTCGGATAAATCAATAAAGTTCACTTGCA
CAGTAAATACATTTTCCTCTAATTATCTTATAAGAACATAAGGCTTCGAT
GGCCAAAATGTTGAGAACGAGTTAAGAACATTTTAAAGCTTTGCGAACTC
TAAAACACCCGATTTCTTAGGAAAACAGACAACAATGCCCACAAAATGGT
TAAAACTAGAACATATCAAGAACACTTTTAGGCTATTTCATCGTCCTTAA
GAATTATACTATTATACATTATTGATAACAGCGCCCGCCATCAAGCATGC
TTCAATTGTCAATAAAACTGATTCTGAAGCCGGAACTTAAAAATCGCTGG
AACAGCCGAGAATCGCCGGAAAACGGGTTCTCTTGAATTTCTAGAGTTTT
TTTATGAAATTTTGCACACTGATGCAAAATGGCAATACCTAAAATATGAC
GGCGCCTGATTTTTAAAAGAAAAAAAATTCCGGCCAAAAATGCCTGAAAT
ATGCCGGAAAAACCGGTTATTGGCATTTTCTCGAGATTTCATCATTAGTA
TTTTCTGATTTTTTGCTCAAAGATGCGTAATAGCAATGTCGGATTTTTGA
GAACAATTTTTTCGGCCGAAAATGTCGGAAATATGCTGAAAATCACCGTT
TTTGCAGATTTTCACTGGGCTTTTTTCCTAATATTTCTATATTTTTATTT
TCACACAAACGTTGAACTGGAAGTAAAATCTCCAGCTTAATTTGAAAAGT
GAAAAACCTGAAAACAAAAAAGTGTTAAGAGACTTGTTAACCCTATTATT
ATCAGGCTTTTTCGGATTTTGTATTCTCAAGGGGGGGTGTTTTCCACCAG
CCTTGCATAACTTTTGATCTAGAAAAGATATGGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTATATTAAAAGTCAAAAACTTTCAG
AGTGTTAAAAAAAAATTTCAGTGAGCTATTAGCAAAATAGTGCCAGCCTG
GTGGAAAACACCCCCCCTGATAAAAAGGGTTGGTGTAATTTAAGATGCAC
GATCTAACGATTTACGATTCACGATGTGCGATCCATGCATAAAGTATGCT
GATTATTCCTAATAATTATCATAAAACTTAAATTATATTGTATAATTCTA
AAACAGTGGCATAATCTTTTCTCGCTTTTGTTTACCACGGTAAATTCAAG
TAAATTTATGCAAAAAAAACGAAATATGTAAGCAATGAAAGTACGAATAA
TTACGACCGTAAAATTATGAAAAAACTTACATAATGTTGATAATAAAAAC
TACCAGACTACCTTGTGAACATAAACAATGCACAAGAAATATTTTTGCTC
TCAGTTTTAACAATCATAATCGAATATAGGAATTTCTTTCTTAAAAGCAA
AGAAAAGAATATATTGGCGAACAATATGTTTTGCGGACCGTAATGTACGA
AGCAAAAAACGGGTGCTCTATTATGAGAAAGAATTTTCTTTTGGTAAACA
ATTCCCCTATATTGATTCAAGTTTATGAAAAAGAGAGAGAGGAGAGTACA
GAAAGTGAATACACGTGGCTTTCACTTTCTTTTAATCTATGACTGAATTG
AAATTGAAAAGAGAAAGGGATTATGGCATAATCAGGAAAACGCACTGAAA
GCTTCTTTAAATATAATTTGTATAATTTTACATGAATGATGTTTTTAAAA
ATAATTGAGTTTCAGCGAATGAAAGTTTGTAAATTGCCTAAATATTTTAT
CATGATTAGCATAATTACGCATGAATTAACATATTTTATGCATGGATCGC
GAATCGTGCATCGTAAATCGTTAGATCGTGCATCTTAAATTACACCAACC
CTGATAAAAATAGGGTTAAGTCTCAAGAATTACTAATAACTACTATTTGT
CGAATTTTGATGACCATTTGTTTATTTTTTTTCAGTCCCCGTACGTTTCT
TATTTTACTTCCTTCTCTATTTTCATTCTATATTTATCATTAGGTAGGTC
CAATATGCATTGAGCTTGTCTTCCTTCATTGAATTGTCGTTATCTCATTC
GAAATATATTCTCAGAAAATAGAGCTCTGTTTAAGTGTTTGTTAATTTGA
TTCTTTTTATACGTTTTGTTGATGTTATTTGTGTTGTTCGAGTTTGAAAT
TTGATTCGTAAAAATCGTTCATTTTGGTTCATTTTCAGCGATACATCATA
TTTGATTATGTGTATTTCAAAACTAACTGCAAGTAAACTATTAAGTTCGA
CTTATATTACTTGATTTCATGTACGTAGTAAAGATAATTCCGAGTTTTAT
TGTTAATTGAAGGGACCATAACGCTTGTTCGAGTAAAGGAGACATTCGAT
TTTTAGTGAATAAACTTCTTTACACATCTTCATATAGTCATGCTGTGACG
TCATTAGTGTCCAGGTCTTGCTGCGAATTAATACGCTATCACTTCAATTC
ATGGTGTTCTAATTATATAAGTATACTTGCCGGTATCTTAAACATCTGTT
AAAATAGGCGATTGAAATTTATGTACCTTTTTTATAAGAATCAATAAATT
TTGGCTTAGGCTTATAGCTGATCTTATTTTTTTCGTGATTTTCAGGCGTA
AAATTTTCTTACTTAAAAAAAGAGACATAAGATCTAGCATTTCTATAATC
TGGGAGGCCTGGAATGTTCATAGCTTGGTCTTACGGTATTGTTCTTATTG
AAGAATTTGATTGATAGAAGGTCGGTCTTTTACTGGGGTATGGTTTTGAA
ATTTGCTACGACTTTCCGAGTGAGTGTTTTATTTTGTCGATGATGCCAAT
CAGCGTGTATTTAAAAACCTACTAGCTTATTGAAACTAATTTTCGCAGGA
ACTAATATTCATGGTCGAAAAAAAATCGGAAAAATTGCATTTCGCGGGTT
TTAATTTTCGTGGTTTTGCCCTTTTTTTGGACAAATTTCTTTCATTTTCC
TAGGGATTTTTCAAATTTTTCGATAAAATTGGAAAAATTGTATTTTGTGG
CTTCAGATTTTGGCGGTTTTACAAAAAAACCGTGAAAAACGCTAAACTTA
ATTCCCGCGAAAATTAGTTCTAATAAAGTAATACTTGTTACCACTTCCGA
AATCTCTCTTGAGATATTTAGAGTATAGTATTTGCTTTTTTAAAAGGTTC
GGCTTTTTAAAAGCCAGTTTGACTTCGGTTTAAAGCCATGCTCATATTTT
AAAGGATTTTCTTGACTGGTCAGCACGATCATTTCATTGTAAAGAAAATT
TGAAATAATCCAAATTGTTTGAACGATCAAGCTAATTGCATAACAGACCC
CCCAGAGCGACTCAAACGAGCCGAAAAACTTTTTGCTGTCTTATTTTAGT
TTTTTTTGTTTAGACTCTGGCCATATTTCTAAACTTTTAGTATTGCTGAA
ATTTTGTGATGTTACGGGAAAGTTGATAAGTTTGCGCGATTGGATTTTGA
GGAAATCCACTTAAAAGAGACAAGTTTTATTCTGTTTTTGTAATCAACCC
AGATACATAAAAACGCCTTCGTCATCAGGAGATTGCTATTTGTGTGACAG
CTCTTGTGATGAAATTGCCAGCCATGAGATTTGATGTGAATTTAGTTCGA
ATGGTTGAATCAAAGAGACTTCTATTAGTAACTCTTAAAAAGCTAATAAA
ATTTAAAGATTCTAAAATTAAATGGAGTTTTGTTGGTATTTTTGGGCTTT
TTAAGATGAGTATCATGGATCTATTAGATATATTTTGGATTTTTGGAGTA
AAGCTGAGTAACTTAGTAGTTGAATAAAGCTTAGTTTTTTCTTTTTTATC
TATAGAATGAACGTGTTCAGCAAATTTGGAGAAACACTCCACTCAGTCGA
TGCGCATGCGCTATTGAAATCAATCGGTCTTGAACAAATGATGTCAGATG
CGCCAACAGACCATAAATATCTAGCCTACCTTAGTGGTGGAATCCTAGCT
TCGGCTGCAGTATTATTTGTCGGTAACCGTTTGTTTCATGATCGTCTTTC
CAGTTGGAACCTACCAGGACCGAAAAGTTCACTCCTGCCGATAGACCTGT
TCAAAGGTCACAAAAACCAACACCAACTACACTTATTGTTAGACGACTAT
GTGAAAACTTACGGCGAAACTTTCGCTTTTAATTACAAAGGACAGCCTGT
TGTCGCAACGACAGACGAGGATATCATACATAAAATATTATGGAAAGAAT
TCCCAAACTTTGAAAACAGAAAGGTTTGTTTCTTTACGTGAAAAATTTAC
CTATTCACAACTATTCGACCTCTTTTGAGTAAAGTGCAAATAATTGGATG
AAGGCCAAGAATGGACCATTCAAATGACATCGAGGGCTTCGTTTATGTAA
GGTGGTTGCCCTGTATTTTTAAATATTTGACCCACTTCCTTGGCTTTTAA
TGAGAAAAATCCCTTTCACAATTTCCAGCTTAGTGATCTTTTGGTATTGA
TACGCAATACGCCTTTTCTACTAAAGATCCCCTAATTTTCTTTACCACAT
TTACAAGCTTAGACCATAGTCATTATAAAAAACACCGGTCTGGCAATGTA
TTGTTATAGCTTTTTGTTCAATTTTCTTTTTTTACAAATAAAAGACAAGT
TGCGATCTGCATACTTTTTGATCACGTTACCAAAGTCTCCTCTTGGGATT
GGTCTATTTTCTAATCACATGATCAAAAAGTTTGCAAAATAAATCGATTT
TGGTAAGCTCTATCTTTTAACAATAAGAAGAGACAAAAGCCTTCCAGACC
AGTATTTTTATAATGACTATGCTTAGACGGCCCGACACGTTTTCAATTGG
GCCCTTTAATATGTATTTTGTTCACCTTACAGTTCTTTGTCGAGATGCCG
TGGCCTTGTCAACACATGGTAACCATGGCAAAAGGAGCAAAGGCCAAAAT
GATCAGAAACCTTTTGAAAGCTGTATTAGACGCCAAAAGTATCAAAAATA
ATTGGGCTCATTTTCAAGAAGCGAACCAGGACGTGGAAGAGCTCTTGAGG
GACGCCGCGTTAAACATGCTAGAAGTTAATTCGACAAGGTAAAGGCTTTT
AATGAGATGTTCATTTCTTGAATACTTTTGGAAGTCTGAGCCCGGGGTCT
ACCTTAATGGAAGAAATCTTCGTTGGAATGAACTTTTGCGGAACGAATTT
TTGCGGAAATAAACTTTTGCGGAACGAATTTTCGCGGAATTTAATTTCGC
GGTTTTTTTGACAAATCCGCGAGATAAAATTTCGCGAAACACGAATATTT
TTAGGATTTAAAGTTTACCTTAAGGTAGTTAGAATGAAGCAAGGCATTTA
TTTGAAAAAAAAGGGTATTGAAAAGATGTGTTTCATGTTGGCGACTTCGT
CAAATTCTCCTAATCTACTTCACTGAACCCAAGGGCATCAAAAATCATTA
AAAAAGTAGAAATTAGCCAGAATTAGACTTGGAAGGGTTCTAGGTTCGTT
GATAAACAGCCTATAAAATCTACCGCACGAAGAATAGATTCAATCTGTCG
TAAAAATGCGGCGCGAAAATTTTTTTTATCTAAAAACANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGACTTAATAGTGGGAAGA
TTTCGTATATGATCTCCGAGGTTATTCCATTCATTTATGCAAAAAGGAAA
GAAAGAGGCACGATAACGCTCGGTTCTACAAAAAGGTGCCTCGAGTGGTG
GTTTTATCCTTCGCCCTGCATTGCGTTCTTCCTCTCCTCTCTGGGGAGGA
AGAATATTCTTTAAGGCTTTTAAAGGCTTTTAATGAGACGTTCATTTCTT
GAATACTTTTAGAAGTCTTAGCCCGGGGTCTACCTTAAGGGAAGAAATTT
TCGCGGGAATGAACTTTTGCGGAACGAATTTTTGTGGAAATAAACTTTTG
CGGAACGAATTTTCGCGGAATTTAATTTCGCGGTTTTTTGACAAATCTGC
GAAATTAAATTTCGCGAAACACGAATATTTTTAGGATTTAAAGTTTAGCT
TAAGGTAGTTGGTTTGGATTTTTAAAATAGAATGAAGCAAGGCATTTATT
TGAAAAAAGGGTATTGAAAAGATGTGTTTCATGTTGGCGACTTCGTCAAA
TTCTCCTAATCTACTTCACTGAACCCAAGGGCATCAAAAATCATTAAAAA
AGTAGAAATTAGCCAGAATTAGACTTTAGTCTGGAAGGGTTCTAGGTTCG
TTGATAAACAGCCTATAAAATCTACCGCACGAAGAATAGTCAATCTGTCG
TAAAAATGCGGCGCGAAAATTAAGTTTTTTGTATCTAAAAACAAGCTTAA
CTTTTATCGATTTATCTATCGATGTCTATAGTCATTTCTAAATATGTTTA
GTTTAGCAAATGGATATATCATGCAGATCATCACCAAGATGGCATTTTCG
CTTGATTGCTCCAACCAATCAGATCTCAACAAACAATTGGTCCAACTATC
ACACCTCTTTACTAGACCTCCAACATGGCTTCAAAGCTGTTCCAGTCTCC
CAATCATTGGAAACTTGTTGAAACTTTCCCCATGGGGATTTAACTCAAGT
TTGCATCAGTTCATAAAGATTGCAACAGACATTGTTGTGGAAAGACGCAA
AGAAAAGAATCGCGAACCACAGGTAAGCGCCTGAGTAACTAGCATGCTGG
CATCCACTAACGGATTCTTCTTCCTCATACTAACTGCAGTTTGGTAGAGG
TCTGAGATTTAGATTACTGAGCAACCTCATCCCTAAGCATGGAGTGATTC
ACCTTCAAGAAAAACTTTGTCCAAACAAATAACTTTGTGAGAGAATCACT
ACAGATTATGATTTTTCACGAAAAATAGTTTTCTACCGAGTACGAGTAAT
GACTAATAGTCTCTATAAAATTGATTACAATTCAGTTGTTTTTATTGATG
ATGCAACGTTGGCTCGAAAGTATATGTTTAGACAAACGTGTAGTATACTC
TTCGCAATTTCATATTTTGCCTGTTTGTCTGTCAAATAATTTTTTTCTAT
TTGGAAAACTACATACTTACAATCTGGCTCTCCCAGTGTCGTTCGAGTGT
CATGGTATACGCCATGGCTTGGCAGCTCGCGTCTGTCTAGTTGCAGTGTC
TGTCAGCGCCGTGATTCCTACTCTTTCGTGGGTAGGACCCATCCCAAATG
CATTCGGAGGGCTATCTATCTATATCTATATATCTATCTATTATACTTAC
AATCAACCTACTTCCAAGACTATTAATATAAATATTTGTCAACAATCAAT
ACTTTTGCTTCTCTTTCTAGGATGTATTGGACGTTCTGTTAGCAGCACAA
TCCAAAGACTCCAACATCAGCACTGAAATTCTATTAGCTCAGGCTATTGT
TCTCCTCACTGTCGTCCACGCTTCAACCGCCACGACGATCTCCATAGCAA
CCTATTATATCGCCAAACACAAAGATGTACAAAGGAGACTACAACAAGAG
ATTGACAGTATCTCAATGGAAGATGGATTTCCATCTTGGGAACATCTACA
TAAACAGTTGCCATACCTTGGACAAGTTGTCAATGAAACTTTACGCCTCT
ACCCGTCAGGTAAATATTCTATGTTTCTTTCATAGACGAGACAATATTAA
TTTAACTTTTTTTTGTTTTACGGGACGAGATGGAGTTTTTACTAGCTCCT
ATTTGATTTGAAATTAATAAGTTAATAAGTACAAACAATTACTAGACATA
GGAAGGCGGAATTCAAGGATAAATCAGGGAAGTCAGCGCTTATACTTACG
TGTTTGAAATACAGGTGACGCTCTCTTATTCGGTTTCAAGGGTTTGGATT
TTTATCGAATAAAGGGAGCTTATTGAATGGGAGAACGTCGTTTATGAAAC
TTTGTTGTTGGCAGTGACTTTCAATATAATCAAACAATGGAGCGTATCTA
CAGAAGAACCTTAGAATTAGGGGACAAGCTGGAGTTTTTTACAAGCTCTT
ATTTGATTTGGTTGGTCGTTAACCAGTAATAAAACAATTCTGTTACTTTT
TTCTAAAGAACGCGTCATCTCTATCACTTCAAATGACCAATTAGTGAAGT
ATCTTGTAAAAACTCAACTCATCACAGAATTAGAGAGCGTAACGACCTCG
TACAAGTTCGAATTAGAGATAGCCAACTGTACTTTCTTTTATTCAGCCTT
TATGTTGATGCGTGAATGTACAAAGCCAACAACAGTCAATGGCATCTCCT
TTGAAAAAGGTGACGGAGTTCTCATCCCAACCTATTCGATGCATCGAGAT
CCTAAAGTTTTCACTGATCCTGAACAATTCAATCCAGACCGGTTCGAGTA
AGTCCATCAAAGCTCATTTTGAACTTGAAAAACCCAGTGGAATACCAAAG
TGTTGTCAGCCAATATTTCACTGTACCCTAAGCTCCCAAATAAATGTCTC
CCCCGCTTATTAAGTCGAAAAGTTTTTGCCTATCTATCTAAGGTGAAGTC
GTCCTTCAGGTTTTTTTATAAAATATCCCATCATGGACCATCACTTCAGG
ATTGCTCCCAAAGGGATAGAGAATGGTGTGATATTTCGGGAAATTTGCGA
TCGTTATCCTAATGCTGCTTGTGGATGTGTGAATATGGAAAGATGGAAAG
ATGGGTACCCTCCCTAGGAAGTGACATTCGGAGAAGGGATAAAATTAAAA
AGGTTTTTTGAAATTTAGGTGCAAATACGGAAAATAATTGAAACTTGAAA
GGAATATATGAATCATAATTTTGTCCTTATATTTTATGCAGTTTTCCTTT
TCCCTGTGAGAAAATTTTCTTGCGCCTATTGTGAAAAATCACATCATCCA
GTATCCAACCAGGATTACTCTGGGTGGGATAATGTTGGTGGGATATTTCT
GGACATTTGCGGTCGTATCCTAAAACAGCTATGTAATTTATAAAATATCA
GTGGATGAAATTGATAGACCCCTCAAAGTGTTCGAAATTATGTACAGTTC
CAGAATTGTTGAGGTTTCAGAGTTTGTTGAATATAATATGTTTCAAAGTT
ATATCAATGAGGATGTTTTGTAAGTGAAGTATTTTGTGGAGTATGTAAAA
TTGTTTATTTTGATCAGCTTTTGGAAAAAATCCCAAGGCCAAGAGAGTTA
AAGGTGAGAATATGTAGAGTCTGTGTGAAAAATTGAAAATTAAAATAAGA
AAAGAACTTTCTATGCTCTGGAGGTGGAGTATGCACAATATTTGCATATT
TATTTGGTAGACTTGAGCGCCCCAAGACTGTGCAATTGAATAGAGCTGTG
GGAGAAAAATTCTGGTAGAATGTCTTTGGGGTGATAATAGACTAGAATTG
CAGATTTTATGCAATGAAGACTGCTGTAGCAGAAGATCTTAATGTTAAAA
TGTGAAATTAAAATGAACAACAGATGAGATGGAGACACCCCCACCAAGGG
GGTGCCTGGAGACAGGTGCGGATCCTGGAGTAAGCTCTCCTTGCCACTCT
AGAGTCACCCACCACTCCAACGCCCCCTTTCCTATTAGAACCACTAGTTT
AGCTAACACAAGCTGAATTGCTTTTAGGCTGCGCGCATCTCCGGTTTTGA
TTTTGATATAGTGGATGCTGCGTATCATGTATAAAATTTCCGTCCGAGAT
TTACCCTAATATTTACCCTGTTTCAATTTCATTTAAAAAGTTATAAAAAT
TAGTGATTGTATTAACATCTAATCATTCAAATTTTTAATTGAAATTTGAT
GAAATTTAAAGATCTATCATATTACATATTACTTTATCAAGCTAATCAAT
TTTCAAAAATTCAAAAACAGAAAGACGGACGGGAATTTTATACACGATAT
GCTGCTCCGAGATCTAATAATTTCCAAAGGATCAAACTATTTCTATAATA
AAGAGGAAAGATAAACATTTATCAAATTTGGCCAAATTTGACGTAGATTT
AAAAAATCAAATGCAAAAACAAAGGTTTTTGTCGTATTAAAAGTTAAGGC
CCTTTGGAGAACTACCGGTATCTCGACCACGCTACTATAAGTATACTATC
GTAGTCGGCAGAGAACGTGTTCAAGATTCCCCATCTTTTGTAGAGTAAAA
ACTATTTTTACACTTAGTTGTAAATGTAGTTTCAAAATAATTAACTATTT
TAGGACCAAACCATCAAGACATTATTATCCGTTCGGTGACGGCTACCGTA
TGTGTCCGGGAAAAGAAATGGCTTTGTCCGAAATTAAAACCTACTTAGCT
TCGATGTTGAAAAACTTTGATTTGTCACTTGTTGACGAGAACCAAGAATT
ATGCGTCAAATCATACATTTCAGCTCAAACCACAATGGCGGTGGATGAAC
CAATCCAAATTCGTGTACAAAAAAGACGTCATTAGATGTAATTTATAATG
TAACCAAGGATGTCCTATATCTACCATCGGTTAAATTTTGCAGATTTTTC
GAATCCATGGAAACAATTGATGATCTGTTTTCTGGATGTTATATCTCTGA
TCAACCTCTACACCAATACTTCATGACAAAGAGTACGAGTTTACTTGTGT
CTAATGACGGATGTTTGAAGTCATTGATGTGTTTTAATAGATACACTCTC
TTGGACCCCCCTCCCCCTGACCCACTGGAAAGTTTTTCCAAATTTTCGTC
CCCGGTAGAAAAAAATACCCTAAAATTTCAGGCCTATTTGCTTTTTTGAC
CGCTAAAAACAAAAGAATTTTATTCCCCATTGGCGGGAGTTCGATAGAGA
TTTTATCCCCACTGTGGGAAGAATTTCTAACGGGGCTTAGTGACAGAGGT
GTAGATACAGATATTTGACTCCGATAAGTCCGAACACAACCTTCTTGTGA
ATTTCGGGTTAACTGGTATATTCGGTTAATGAAAGACTGTATTATAGTAT
GGCGCGCCAAAAGGCTATTTAATACTAACTTTTTTTATAATACCAACTTT
TTTTTATAATATCAACTTTTTTTATAATATCAACTTTTTTTTTTATAATA
CCAACTTTTTTTTTTATAAAACCAACTTTTTTTTTATAGTACCAACTTTT
TTTTTAGTTCAAAGTTTTTTCATAACACCAATTTTTGTCTCGCTTACTAT
GCGTGTATAATCGATCAAGTGTATTAAAATGAAAGTTGGTATTATAAAAA
AAAAGTTGATATTATAAAAAAAGTTGGTATTATAAAAAAAAGCTGGTATT
ATAAAAAAAAGTTAGTATTAAAAAGCCTTTTTGGCGCGCCATATTATAGC
CTCACATTCGTAACAAAAGTTGTGCAGGTATCATAACATATCCACATTAA
AACGGAGTATGGGAGGTGTTGAAGAACCAAGAACTTTTGTATATGGTTCA
TTGCAGAAGAAAAAGTTGGTAATATTTTGTTTGGTTAAATTCAAGAAGGA
ATAAATTTATTTTAAAAAGACAATTATTTCTTCATTATGTTAATTGTAAA
TAATCATGCATATATATAATCTTTAATATGGTGCTTATTAAAAAAACACA
TGAATCTTAAAATAGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005784XLOC_005784Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010303-exon-sc0000104-1575043694:190964..190990TCONS_00010303-exon-sc0000104-1575043694:190964..190990Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1575043694:182618..183035TCONS_00010303-exon-sc0000104-1575043694:182618..183035Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1575043694:181803..182008TCONS_00010303-exon-sc0000104-1575043694:181803..182008Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1575043694:180219..180489TCONS_00010303-exon-sc0000104-1575043694:180219..180489Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1575043694:179282..179570TCONS_00010303-exon-sc0000104-1575043694:179282..179570Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1575043694:178544..178694TCONS_00010303-exon-sc0000104-1575043694:178544..178694Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1575043694:175374..176737TCONS_00010303-exon-sc0000104-1575043694:175374..176737Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1510915933:190964..190990TCONS_00010303-exon-sc0000104-1510915933:190964..190990Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1510915933:182618..183035TCONS_00010303-exon-sc0000104-1510915933:182618..183035Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1510915933:181803..182008TCONS_00010303-exon-sc0000104-1510915933:181803..182008Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1510915933:180219..180489TCONS_00010303-exon-sc0000104-1510915933:180219..180489Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1510915933:179282..179570TCONS_00010303-exon-sc0000104-1510915933:179282..179570Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1510915933:178544..178694TCONS_00010303-exon-sc0000104-1510915933:178544..178694Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1510915933:175374..176737TCONS_00010303-exon-sc0000104-1510915933:175374..176737Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1491911889:190964..190990TCONS_00010303-exon-sc0000104-1491911889:190964..190990Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1491911889:182618..183035TCONS_00010303-exon-sc0000104-1491911889:182618..183035Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1491911889:181803..182008TCONS_00010303-exon-sc0000104-1491911889:181803..182008Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1491911889:180219..180489TCONS_00010303-exon-sc0000104-1491911889:180219..180489Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1491911889:179282..179570TCONS_00010303-exon-sc0000104-1491911889:179282..179570Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1491911889:178544..178694TCONS_00010303-exon-sc0000104-1491911889:178544..178694Clytia hemisphaericaexon
TCONS_00010303-exon-sc0000104-1491911889:175374..176737TCONS_00010303-exon-sc0000104-1491911889:175374..176737Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:175374..190990 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.51431e-08	0.0501276	0	0	0.0022036	0	0.488054	0.638018	0.917591	1.587e-10	3.88512e-08	0.0432536	2.53197e-06	3.96499e-08	0.0768327	0.327647	6.9799e-06	0.404101	0.00899204	0.0144946	0.0883706	0.00329008	0.471195	0.0070854	0.0157369	7.1998e-09	1.02682	0.327165	1.00858	0.0520663
Blast
[Close]
BLAST of TCONS_00010303 vs. Swiss-Prot (Human)
Match: CP3A4 (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4)

HSP 1 Score: 168.318 bits (425), Expect = 4.712e-44
Identity = 137/477 (28.72%), Postives = 239/477 (50.10%), Query Frame = 2 
Query:  209 HDRLSSWNLPGPKSSLLPIDLFKGHKNQHQLHLLLD-DYVKTYGETFAFNYKGQPVVATTDEDIIHKILWKE-FPNFENRKFFVEMPWPCQHMVTMAKGAKAKMIRNLLKAVLDAKSIKNNWAHFQEANQDVEELLRDAALNMLEVNSTSLANGYIMQIITKMAFSLDCSNQSDLNKQLVQLSHLFTR----PPTWLQSCSSLPIIGNLLK-LSPWGFNSSLHQFIKIATDIVVERRKEKNREPQ-DVLDVLLAAQ-SKDSN----ISTEILLAQAIVLLTVVHXXXXXXXXXXXXXXXKHKDVQRRLQQEIDSISMEDGFPSWEHLHKQLPYLGQVVNETLRLYPSAFMLMRECTKPTTVNGISFEKGDGVLIPTYSMHRDPKVFTDPEQFNPDRFETKPSRH-----YYPFGDGYRMCPGKEMALSEIKTYLASMLKNFDLSLVDENQELCVKSYISAQTTMAVDEPIQIRVQKR 1585
            H       +PGP     P+       + H+   + D +  K YG+ + F    QPV+A TD D+I  +L KE +  F NR+ F  + +  +  +++A+  + K +R+LL     +  +K       +    +   LR  A     V    +   Y M +IT  +F ++  + ++     V+ +    R     P +L S +  P +  +L+ L+   F   +  F++ +   + E R E  ++ + D L +++ +Q SK++     +S   L+AQ+I+ +   + +T++ +S   Y +A H DVQ++LQ+EID++      P+++ +  Q+ YL  VVNETLRL+P A  L R C K   +NG+   KG  V+IP+Y++HRDPK +T+PE+F P+RF  K   +     Y PFG G R C G   AL  +K  L  +L+NF      E Q   +   +S    +  ++P+ ++V+ R
Sbjct:   30 HGLFKKLGIPGPT----PLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF-MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFL-SITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL-QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQ---IPLKLSLGGLLQPEKPVVLKVESR 496
The following BLAST results are available for this feature:
BLAST of TCONS_00010303 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CP3A44.712e-4428.72Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1... [more]
back to top