TCONS_00010214 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010214
Unique NameTCONS_00010214
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length354

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010214 ID=TCONS_00010214|Name=TCONS_00010214|organism=Clytia hemisphaerica|type=transcript|length=354bp
CCTACAATAAGAACTTCCTCATtccttaaaatcaaatttttactttcact
ttcgatttcaacaaCATTAACTTAATCCAATAAACTTCATTAGACAAAAA
ATCTTCCCTTTCTATTTCTATCATTAAAACTGTCATTAAAGCTAATTAAT
CATCCGTCATTTCTGAGTTCAGACATTTGACATAATCATGATGACGTCAC
CGTTTTGTATCATTGCCGCTCTACTTGTCGTGACGTCAtcaaatgacgta
atgttatttTATCGCTTGACAAGAAAATGAAGTCATCTTTGGCAACTCAT
CTAATTATTATTTTCGTGTTATTTATTATGTttacatatttgttttgatg
tgaa
Run BLAST on NCBI

transcript from alignment at sc0000103:62610..62963

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010214 ID=TCONS_00010214|Name=TCONS_00010214|organism=Clytia hemisphaerica|type=transcript|length=354bp|location=Sequence derived from alignment at sc0000103:62610..62963 (Clytia hemisphaerica)
ttcacatcaaaacaaatatgtaaACATAATAAATAACACGAAAATAATAA
TTAGATGAGTTGCCAAAGATGACTTCATTTTCTTGTCAAGCGATAaaata
acattacgtcatttgaTGACGTCACGACAAGTAGAGCGGCAATGATACAA
AACGGTGACGTCATCATGATTATGTCAAATGTCTGAACTCAGAAATGACG
GATGATTAATTAGCTTTAATGACAGTTTTAATGATAGAAATAGAAAGGGA
AGATTTTTTGTCTAATGAAGTTTATTGGATTAAGTTAATGttgttgaaat
cgaaagtgaaagtaaaaatttgattttaaggaATGAGGAAGTTCTTATTG
TAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005732XLOC_005732Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010214-exon-sc0000103-1491911889:62610..62963TCONS_00010214-exon-sc0000103-1491911889:62610..62963Clytia hemisphaericaexon
TCONS_00010214-exon-sc0000103-1510915933:62610..62963TCONS_00010214-exon-sc0000103-1510915933:62610..62963Clytia hemisphaericaexon
TCONS_00010214-exon-sc0000103-1575043694:62610..62963TCONS_00010214-exon-sc0000103-1575043694:62610..62963Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000103supercontigsc0000103:62610..62963 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.244674	0.238596	0.554065	0.542066	1.31983	0.260736	0.943701	0	0	0.510779	0	0	0	0.168991	0.277868	0.447292	0	0.376523	0	0	0.236565	0	0.561077	0.5101	0.525391	0.937798	0	0	0.271569	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010214 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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