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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010212 ID=TCONS_00010212|Name=TCONS_00010212|organism=Clytia hemisphaerica|type=transcript|length=986bp
GTTTTACGCTAATATCGAGCGAATATTGGACAGGTTCCTAACCGTGTACG
ACATCGCTGATCTTCATGTGCCAACTGAACAGAAAGAAACGACTGAGCCA
GAAAAATCGACAAAAGAAGTCTACCCATGTAGTGTTCTTGACTGTAACAG
GCACGCTAACCCATACGTTTATCGAAAAGCAAGAGATTCTCACGAATTAA
AAGTGCACCAAATCCAacgagaagaaaaagaagagcaACAAAAAGTACCC
GAGATCAAAGAAGAGAGCTTGAAAGgggactttgttttgaaataccaaaa
ggCTCTTTTCTCAATCAACATGATTTTCGAAACATTAACGATAGCATACG
CGAGGGAGATGGTGATCGGTTACTTAATTGTTACAAGGTTGCACTTCTTT
ATTTTAAAGCAACTGGTCATACCAATTTTTCTCATGAATTGATCAAGCTT
TTCTACCAAATTAAGCTAGGTGATAAAAAGGATGCATTTCGACTTATATG
GGGCCGTTTCATCAATACCCATGGATTCATCGGTCGAAACATACCTAATG
ATTTACATATGGAGCATCTTAATGGATATTTAAAGGAGTTGTTAAGATCA
TTACGGGggaatttgaatgaaaagaacGCTACAAGATTGCAAAAGCTTTA
AATAACACACAGGCAATCGTGAATAGCTTTGAGAAAGGTCTACTTATTGA
ATCAAGAAAAACCTCATCACGAACACCAAAATCTACTCCAGACGTAAAGA
AATTAGCTGAAGAATACAAAAAGGCTTCTGTTTTTAAGGACATGGGAGAA
AGAGCATACGAATCGTTTCCGggatttaatgaaaatgttttacatgAATT
AATTGACAGTGCACAACTTCATACATGgttaaagaaaaaggaaaaagaat
ttgaaaaagcaTACAAGAGTGAGACACATTAAATCAAAATGTTGAATATA
TTGGTCAGACACTTacgtaaaatataaatatagaaT Run BLAST on NCBI protein sequence of TCONS_00010212-protein >TCONS_00010212-protein ID=TCONS_00010212-protein|Name=TCONS_00010212-protein|organism=Clytia hemisphaerica|type=polypeptide|length=146bp
FYANIERILDRFLTVYDIADLHVPTEQKETTEPEKSTKEVYPCSVLDCNR
HANPYVYRKARDSHELKVHQIQREEKEEQQKVPEIKEESLKGDFVLKYQK
ALFSINMIFETLTIAYAREMVIGYLIVTRLHFFILKQLVIPIFLMN Run BLAST on NCBI transcript from alignment at sc0000103:522344..523442- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010212 ID=TCONS_00010212|Name=TCONS_00010212|organism=Clytia hemisphaerica|type=transcript|length=1099bp|location=Sequence derived from alignment at sc0000103:522344..523442- (Clytia hemisphaerica)
GTTTTACGCTAATATCGAGCGAATATTGGACAGGTGCTTATCTTTTCTAT
TTCTTCAAAACTTTCAGACTTATAGTCTTACCATCTATATTGACCTTTTT
CTACCTTAAAATACCTACCCTTAATTGAGAATAATATCTTTTATAGGTTC
CTAACCGTGTACGACATCGCTGATCTTCATGTGCCAACTGAACAGAAAGA
AACGACTGAGCCAGAAAAATCGACAAAAGAAGTCTACCCATGTAGTGTTC
TTGACTGTAACAGGCACGCTAACCCATACGTTTATCGAAAAGCAAGAGAT
TCTCACGAATTAAAAGTGCACCAAATCCAACGAGAAGAAAAAGAAGAGCA
ACAAAAAGTACCCGAGATCAAAGAAGAGAGCTTGAAAGGGGACTTTGTTT
TGAAATACCAAAAGGCTCTTTTCTCAATCAACATGATTTTCGAAACATTA
ACGATAGCATACGCGAGGGAGATGGTGATCGGTTACTTAATTGTTACAAG
GTTGCACTTCTTTATTTTAAAGCAACTGGTCATACCAATTTTTCTCATGA
ATTGATCAAGCTTTTCTACCAAATTAAGCTAGGTGATAAAAAGGATGCAT
TTCGACTTATATGGGGCCGTTTCATCAATACCCATGGATTCATCGGTCGA
AACATACCTAATGATTTACATATGGAGCATCTTAATGGATATTTAAAGGA
GTTGTTAAGATCATTACGGGGGAATTTGAATGAAAAGAACGCTACAAGAT
TGCAAAAGCTTTAAATAACACACAGGCAATCGTGAATAGCTTTGAGAAAG
GTCTACTTATTGAATCAAGAAAAACCTCATCACGAACACCAAAATCTACT
CCAGACGTAAAGAAATTAGCTGAAGAATACAAAAAGGCTTCTGTTTTTAA
GGACATGGGAGAAAGAGCATACGAATCGTTTCCGGGATTTAATGAAAATG
TTTTACATGAATTAATTGACAGTGCACAACTTCATACATGGTTAAAGAAA
AAGGAAAAAGAATTTGAAAAAGCATACAAGAGTGAGACACATTAAATCAA
AATGTTGAATATATTGGTCAGACACTTACGTAAAATATAAATATAGAAT Coding sequence (CDS) from alignment at sc0000103:522344..523442- >TCONS_00010212 ID=TCONS_00010212|Name=TCONS_00010212|organism=Clytia hemisphaerica|type=CDS|length=882bp|location=Sequence derived from alignment at sc0000103:522344..523442- (Clytia hemisphaerica)
GTTCCTAACCGTGTACGACATCGCTGATCTTCATGTGCCAACTGAACAGA
AAGAAACGACTGAGCCAGAAAAATCGACAAAAGAAGTCTACCCATGTAGT
GTTCTTGACTGTAACAGGCACGCTAACCCATACGTTTATCGAAAAGCAAG
AGATTCTCACGAATTAAAAGTGCACCAAATCCAACGAGAAGAAAAAGAAG
AGCAACAAAAAGTACCCGAGATCAAAGAAGAGAGCTTGAAAGGGGACTTT
GTTTTGAAATACCAAAAGGCTCTTTTCTCAATCAACATGATTTTCGAAAC
ATTAACGATAGCATACGCGAGGGAGATGGTGATCGGTTACTTAATTGTTA
CAAGGTTGCACTTCTTTATTTTAAAGCAACTGGTCATACCAATTTTTCTC
ATGAATTGATTTTACGCTAATATCGAGCGAATATTGGACAGGTTCCTAAC
CGTGTACGACATCGCTGATCTTCATGTGCCAACTGAACAGAAAGAAACGA
CTGAGCCAGAAAAATCGACAAAAGAAGTCTACCCATGTAGTGTTCTTGAC
TGTAACAGGCACGCTAACCCATACGTTTATCGAAAAGCAAGAGATTCTCA
CGAATTAAAAGTGCACCAAATCCAACGAGAAGAAAAAGAAGAGCAACAAA
AAGTACCCGAGATCAAAGAAGAGAGCTTGAAAGGGGACTTTGTTTTGAAA
TACCAAAAGGCTCTTTTCTCAATCAACATGATTTTCGAAACATTAACGAT
AGCATACGCGAGGGAGATGGTGATCGGTTACTTAATTGTTACAAGGTTGC
ACTTCTTTATTTTAAAGCAACTGGTCATACCAATTTTTCTCATGAATTGA
TTTTACGCTAATATCGAGCGAATATTGGACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010212-exon-sc0000103-1575043694:523410..523442 | TCONS_00010212-exon-sc0000103-1575043694:523410..523442 | Clytia hemisphaerica | exon |
| TCONS_00010212-exon-sc0000103-1575043694:522344..523296 | TCONS_00010212-exon-sc0000103-1575043694:522344..523296 | Clytia hemisphaerica | exon |
| TCONS_00010212-exon-sc0000103-1510915933:523410..523442 | TCONS_00010212-exon-sc0000103-1510915933:523410..523442 | Clytia hemisphaerica | exon |
| TCONS_00010212-exon-sc0000103-1510915933:522344..523296 | TCONS_00010212-exon-sc0000103-1510915933:522344..523296 | Clytia hemisphaerica | exon |
| TCONS_00010212-exon-sc0000103-1491911889:523410..523442 | TCONS_00010212-exon-sc0000103-1491911889:523410..523442 | Clytia hemisphaerica | exon |
| TCONS_00010212-exon-sc0000103-1491911889:522344..523296 | TCONS_00010212-exon-sc0000103-1491911889:522344..523296 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103 | supercontig | sc0000103:522344..523442 - |
Blast
The following BLAST results are available for this feature:
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