TCONS_00010149 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010149
Unique NameTCONS_00010149
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2041

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010149 ID=TCONS_00010149|Name=TCONS_00010149|organism=Clytia hemisphaerica|type=transcript|length=2041bp
GTTAAATTATTCTAAAAACTAAACAAACATCGTATCGCACAACAACAAGG
GGAAATTTCATTCACACAGGGGAATTCAGTTGCATCCACATCTTTACTTT
TTTTACACATTTAACCAGGGGAATCAAACACAAACATACTTCAGTGATTT
CGAACACGAAGAAATATTGCTGAACGAATAGACGGAATTTAAAGATTAAG
CAAGCTCGAATAgaagaaaaattgttttctcaATTAAAGAATCTACGGAT
GAAATAATCAGCGTTGGCAAAAAAACTGATTACACCGAGAATTGAGAGTA
AACAGAATTTGAAAGCAAAGAAATTCGCAATAGGATATCAAAGGCGTCGG
TCATCACATATAAGTTGACAGACTTAAAGAGTTTTTCACACCCATATATT
ACAATCAAGGTGAAGTAGCAAAGCAAAGAACGAAAGACTGAATGTTTTTA
AATATACTTAAATACCTTACTAAGAGCACGGCTAATCACTTGTGATATTT
CGAATAAGCTTTGACTTCGAATGACGTTTAATAGCATCTCGTGATAGATG
GTTGAGGTTAGTTGAAAAGTGATATTTTTGATACAACAAGCAGATTAAGA
GAAACACTTGTCATTTGGTGTGTTTGGTGGACTTAATTTGAATAACTCAT
CATCGTCAAACATTAACCACCACAGCTGTTGTGCAATTTGTTTGTTTGGG
AGACACACTTCGCTGGATTACAAGGAAAGGGACTAAACACTAATCACGTG
TTAATCAAAAGTCGAAGTTTTTGGTTTTGGGTGAAATTTTGGTTCTTTTG
AAAACTCGAAGAGTGTTTATTCTTCATCTTTCTTGGCAAGCGAGTGAGGA
AATTTTACCAACCTTCATCAGGTGGCAAGCAGAATCAAGCAATATTTGGG
AGCAAAAACGTTCATCCAgggataaaaaaacaaacagggaAAAGGACACA
CAGGAATATAATGGCAACCGAAGAATTATGTTTAATTTGCTGgGCGCGTG
GGCGTGGGGGAATGAACTTGGGACCGGGCGGAATTTCCGCAAACTTTAAC
ACTGACAACTCAACATATCAAATCAACGCAAACAATACACGTAATCACAA
CATGGGCGGGAATGGGCGTAAAGGCGCCATGAATATGAATGGAGGGCGCA
GAATGGGCGTTAATAGGATGACAGTAGCAAACAGCAAAACAGGACACAGC
GTACATATGAGagGGCTTCCGTTTGAATCGACAGctgctgacgtcatcag
gtTTTTCGCACCTTTACAGCCAGTAGATATTCGATTGTTGTACGAGTCAA
ACACAGGTCGGCCAAAGGGAGAGTGCGATGTCGATTTCACAACCCACCAT
GATGCAGAGGAGGCtatgaaaaaagataaacaaaatatGGGACACCGATA
CATTGAATTGTTCTTGAAATCCACAATCCATGGCAACGGGAAATGGAACA
ATAACAATAACATCATCGGAAAAAaTTAAAAATTCTTTAGGTTCTCCTCC
GTTGCTTCTCTCCCATAACAACAACAATCGCTCCTCCATCATTCAACAAC
CAAACCTAAATAACATCTACGCTGGAGGCTTCAACAtcacaaaacaacaa
caaacaaccAATCAGAATCGATTTAACACTAATTCCTTACCTCCCATTGG
TTGTAATTTCAATAACAACACTCCTTCGTCGTTGGGATTTGTTCGAAAAC
CTCCTCCTCCTCCCTCCTCCGTGGATCCTTTTGGAGCGAACCGAGTGACA
CGTGAtgatttgaatttcaaagataCATCACGTGATCTAGACTTGTTGAG
TCAGACGATCCATAATGGCAGCCAAACTATTCAAAATGGTTGCAAAAGTA
ATGGGGTTCAAAGTTTTTATAGCAATGCGATTATATAATAGGGTGTGACT
TgattttgaattcaattttttggtTATGGTCAGAAGAATTTTGTGTATAT
TTTATTAAAGGTGTGAATTTTCtgtttgtttatttaattttttatgcatt
tgaaattattattttttaaatgatgaaaaagaaTATTTGGG
Run BLAST on NCBI

transcript from alignment at sc0000103:10560..21901+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010149 ID=TCONS_00010149|Name=TCONS_00010149|organism=Clytia hemisphaerica|type=transcript|length=11342bp|location=Sequence derived from alignment at sc0000103:10560..21901+ (Clytia hemisphaerica)
GTTAAATTATTCTAAAAACTAAACAAACATCGTATCGCACAACAACAAGG
GGAAATTTCATTCACACAGGGGAATTCAGTTGCATCCACATCTTTACTTT
TTTTACACATTTAACCAGGGGAATCAAACACAAACATACTTCAGTGATTT
CGAACACGAAGAAATATTGCTGAACGAATAGACGGAATTTAAAGATTAAG
CAAGCTCGAATAgaagaaaaattgttttctcaATTAAAGAATCTACGGAT
GAAATAATCAGCGTTGGCAAAAAAACTGATTACACCGAGAATTGAGAGTA
AACAGAATTTGAAAGCAAAGAAATTCGCAATAGGATATCAAAGGCGTCGG
TCATCACATATAAGTTGACAGACTTAAAGAGTTTTTCACACCCATATATT
ACAATCAAGGTGAAGTAGCAAAGCAAAGAACGAAAGACTGAATGTTTTTA
AATATACTTAAATACCTTACTAAGAGCACGGCTAATCACTTGTGATATTT
CGAATAAGCTTTGACTTCGAATGACGTTTAATAGCATCTCGTGATAGATG
GTTGAGGTTAGTTGAAAAGTGATATTTTTGATACAACAAGCAGATTAAGA
GAAACACTTGTCATTTGGTGTGTTTGGTGGACTTAATTTGAATAACTCAT
CATCGTCAAACATTAACCACCACAGCTGTTGTGCAATTTGTTTGTTTGGG
AGACACACTTCGCTGGATTACAAGGAAAGGGACTAAACACTAATCACGTG
TTAATCAAAAGTCGAAGTTTTTGGTTTTGGGTGAAATTTTGGTTCTTTTG
AAAACTCGAAGAGTGTTTATTCTTCATCTTTCTTGGCAAGCGAGTGAGGA
AATTTTACCAACCTTCATCAGGTGGCAAGCAGAATCAAGCAATATTTGGG
AGCAAAAACGTTCATCCAgggataaaaaaacaaacagggaAAAGGACACA
CAGGAATATAATGGCAACCGAAGAATTATGTTTAATTTGCTGGTAAGATT
TTTATCGCTGTTTTCTtcagtttttccaaaaaatttcatttcattcttAG
TTTGTCGAAATCATATTCCCAGGGATTCATTCATTTTTTTGAGTTATCAA
ATACCTGATTCCAGGACACTTATCCTCAGACGTCTTATTCCATGACTACG
ATCCCGAAGGGGCTGGATCcgaaactcttggatgggaaatgaagccactt
atttcccatccacaACACGTGTCTCGTGTGTTTTTCAAACTAAAATTCTA
AATGGGTGGcaaacttaaggcttcacttttttcttgcttgagaaaggttg
aagattcctctctagccccttCCAGTCTTCAAACTCAATATCTTATTCTC
GTTTAGGCTGCTGGCACCCACTAACAGATTTGTAATCCTTATATACTTAT
ATACTGCCTGAAGTTTTGTAGAGGGCGGTGAAAATGGTCGATCTTCTGCC
AAATTTTAGTTCACAATTAGAAAAGGCAGGGCAGAAGAATGACTGTTTAG
ATTATAGAGTTTCACGTGCTTCCGAAAAGTTATGAGAAAGCTACAAACTT
GATTTATATGCGGAATATATTTGAATACTTCATTTGAATCTTCGATTTTT
AATGGCTAGACTGTCTAATTGACTTAATTAACCTTTATTTTCTTCCAATG
TTTCAGTAAGAAGCTTTATCATTTACCAAACAGTTAGGTCCCAAATTTAC
TTAGAAACTTAAAAGTCAGCGAAAAACCTTACCCATTAATGTAGGAGGAA
ATCTACAACAGCTTTTTTGACTGGAGAGGAAAGCTATGTATCTAATTAAT
GAAGAAAGCAACTAAAGACTTTTGAACTTCATTAAGAACTTGCGATTTGA
TAGCGCTAATTAATTAAGTAAGACACAAGGAACGCGATAGAGAGAGATGT
TATTGATTTTGAACTTGTTAAGCGGAAGCGCCGGACcacggtttttttta
taagaacatcctaaatttttgaagtctttgaATGTTCTGAACTTTTTGAT
CTTTAAGCCTCTAAAAAATGGTCTTTTTTTCAccatttaaagtatttttg
tccatttccctaagaaatttGGACAGATTCcgcaaagcctaaaaatgttc
ttaacgttgttctcaatattttgaccaagagaacattatgtttttatata
gtctgttcttattaaaaaaacctATATAATCTTACTTTTTCTCACGGAAT
TCACAATCATGTTCCAATAACCTGTCATCAAAAGTATCGCTCGTCGTAAT
GTGCCGGTATCGAGGATTTTGAGGTTTAGCGAGAGTTGTAAAAGATTAAG
TTAAGGAAGACTTAATTTTGTTGTGAGGTTGGGTCGAATGCATGTTATAA
TCATCAATACGTTAGTTAGTCGCTACAATTGCTGGTCTAAAGCTATCAGG
AATTGATTCGTTGCATATGGCTTGCAGTGAGCTTTGTTTGAGCTCTACTT
GGGAGCtatatttatcattttctgCTAGACATCAGCATAGAAAGGAACTT
ATACTTCTTGATACATGTTCCTACGTTTGCACATCATCTTTTTACTCcac
tgagctttatataaacTCCGAAAGCAGTTTCTCGATTGCAGCCgaccaaa
atctttgatcgaagttttctttttgaaagggTATCCTAATGCCATTCGAT
ATGGGTCAAATCATTTTCAAGGGAAATTGCAATGAACAATGAATTGACCT
ACATCGAGGAATGCTACCATTAGGGAATCACCGTTCTCAAAACTTCGATC
ACACATGGCGGATTGGCTTAGTCCAAGATCTTTATAGAGGCCAGTGATCA
CAACATTGTCCAAACGTTCATACAGTGTTGTTTGTATGTCCGTTATGGAT
GTTAGAAGGATcgtgttttgaaattttggtaataTTTTGTTGGATGCCAG
CTTGGAAGTCatcctcgtccccgtgtattccaggctttatttacgatACT
GATTGATAGACGCCAGAGAATaatatctagcgctatcagtaagcattaAA
AAAGCTGATGATACGAAGGGAGCGAGCTTGGAAGTTAGTTTGTTACAAGT
TGTCATATTGAGAATATAATGATAAAATGTGTAGACAATTAAACTGGTGC
TTCTTAGTTGACTAAAGAATATTGAATGATGAGTTTTGCTCACAAGCTAG
GAAAGTCTCGTGTTGTTGAAGCTTCAGTTAGAATTGACATGATTCGGTAG
ATATGTCTCGTTAGATCTAGTTAGATATTTTATGTAGATAGCCCAGTATT
CTAGGACTTTCAGACGCAGTCTTTCTATTGAATTTACGGGAACAAATGGT
CAGCCGATTCGGCTGAACTaggaactgaacggaacattgaaAGGAGCGGT
GATTCGAACAGCGAACTCCTGGTTTGAAGCACcggcgccttagaccactc
ggccattgctcCATAAATAGTTTAATCCGAAAGTGTACCAAGACTTCAAC
TACTTAATGAAGCTCGAATGTATATTCTCGAGTATAGGCGACAGACAAGA
CTCGTCTTGATTCTATCCGTCTGCGAAGTGGCAGTCTTTTCCTGATTAGA
CAGAATGATCGGTCAACTATCGATttaaaaagtcatttaatttaGTAACA
AGTTGTTCTTAATGTCAAAAGATCATAGGTTTAATCTTCTCATCAAAAAA
GTGCTCAGCAAAAACGAGTATCTTTCAACCAGAGGTCTCATCTCATCTTG
CCAAACTTTAGCTGTTTTAGCTCACCAACTTTCATGACAAAAACATCTTC
AGTTGTTTTGGTTGCTTTCCTATGTATTTCTTTTAAACTTATTTAAAACA
GCATCccttaaaatatttctttgagaACCCCAGAAATTCAGAGATCTTCT
TTACTGACtgagttaaaataaaatttctctGATTTTTGGAGATCAGTTTA
GTTCTTTAGCCGATAGGAATGATAAAGCAACCATAATAGAGTTGTCCGTA
TTACCAGTAATTCTCGTAATTCCCGCGGGAGGGGGGACTCGGGTGAAATT
GGGAACGGGaggtgccgctggtcagggtcccttttttaagcCTCTGAGGA
TATCTGGCAGGGtccaaaataattaattttcaagttttacatCCGTCTAC
ATTTCATTTCGTCATTTTTGTTATCAGTACCAATCGTTTCTGCGGTTAGA
AACGATCCCACAGGAGGAGGGAGAAAGCCTCTAAGCTTTATATAAGCCCT
GGAAACATTTTCTCAATTCCAGCCAATTAAAATCTTTGACCAAGGTGTAT
TTGAAAGTGTAACCCTAGCGGTGGCAAAACTCAATAGTGGTCTGAATGCA
TCAAAAatgcgctagatctactttcacTTGAATTTTTGTGTGTGCACATC
AGTGCGTTGTTTAGCGTCAGTTTTTAACACTACATTAGATTTTTAGCGGG
TACCACATTAATTAAAATCCGCTCAAAGCTGGTTTAGTCCAGGGTTTTTA
GAAATCAGTGGAGAGAGCACATCATACACTCTTTCGTAGATACAGGGGTG
GTAGAAACAAATTTGACAGCTTCCCCTGaacggcattttctcgagaaaGC
TGTTTGTGAATTTTGGAAggataagaaaaagaagttAGACCATGCAACAT
GACTTTGAAACATTAATTCCGATAAAAGGTGTCCGGAAAAGTCTTTCGCA
CAAgccttttatttcatttaaaatgtcCGAAATAATCTCcttgttcaatt
tttcacacacatgttgcaaaaaaaaatcacaaaaaataaaCGAGGCAAAT
ACGAGAGATAAAGATCAGCTTAAGGTGTAAAGATGACGTCGGGTTATCGA
GGTAAAGCCGGCTCAAAATTTGTAAGCAGTCGTAAATCAGTTGATATCTC
AGAGGCGCATTTTTTTAAGAtcattgtttcaaaaagtttaagtaAGCTTT
ATAAAGAtagctctctctctctctctcttgaCTGTTGCAGAACGAAATAG
ATGTGAGATTCTTTCAAAAGGTCACACATTTAGAAGAGCGGacaaaatat
gagaaaaatatGTCATGTTTTAAAGTTCACGTTTAAGTAGAAGGGTTTAT
GGCTTGAAAGTTtacaaacaatattttttgtgaGTTGACGATATGAAGGC
ATCAtcagacatttttttctttcttgttttttctttgtATCTCGCTGTAC
TTTAGTGCTGATGAAGGCAGTGAATGAAATGAATTGATAGACTGacaatg
atttggaaaaatttgtcCAAACTAATGGTTAATCACCTCTTGtagcctcg
ttttggagaaCCATCGTAGTCACGATTAACAATCCAATGAGAATTTCCGA
ATAATTCAAGAGACAAAAttaagaaatcttttttgtgcAGCCAGCTTGGT
TCGTCTCTAGAAATATTCGAAGTTTTCATTTGATTGTTGGACAAACTTTT
CGATTGTTGATCTACGGTATGGTGGAAGTTACCTCATCTAATATAAAGTC
TTTCGAGATTTAGATCAGATCTAAAACAGAGCAGCCAAGTATTTtgattt
caatatttcaaaaatgttaagTAAAGCCGTGTATTTGAAAGAATTTCAGT
TCGTAGCAAACTGGGGCAGGTACTGAGGAAAGTTATTAACATATCCAGGA
TCCTAAACGTAAATCAGTGTTCCGATCTGACAGTTGAAAACAGATGATGG
AAAAAACGCTAACAGTGCAGAGCAAACTTCCGGAAGAAAAAATGTGATGA
AATGCGAAGTAGATATTATAGAGCGTCCCAGGAGCATTACTATTAGGCAA
GATACTGTGAAGGTTTTATTACGCAGTACTAGCTACATTGCTATAATTTT
GAAGGCATCTAATTTTCGTCGATATGTTTTTATAAGAGTATCCGTTCTAA
TAGCTTTgttattcaaatattttgatcagattttcaagaaaatgattgga
ttttaagagttttgaggagatttttaaacattaagtTGCGTCACATCTAT
ATAATCAACATTTTACATgtcaaatttcctttctttttaagaCTCTGAAA
AAGTTATTACTTTAATTACTATTACTTTAAAGTGATTTAAAGTCTTAAAG
GCAATGCAGGTTAATTATTAGAAGTCAAGCAGGTTTTTTAAACTGAGCGT
TAAGAGTCAGAATTACTTTGGTGTGTTCGTTCAAACCAATCCCAgcgctg
gcacacaacgttgtttcaacgttcacgacgttgtgaacgttagataaacg
tcaaaAAACATTGTGTGTCAGCTGAGATGAAATTGATTTATGAGATGGGC
CCACTTTACGCTTCTTTCATGGGTTGGGAATCCGAGATAAGATACCTGAT
ATCAAATAATTTATAATatgaaattttcatcaaaaaaaaaaacaacagaa
aaatagaaatcaaatataaacaCATACCTTAGACAGAACACACCGACAAA
ACATCCGCACATATCCATGGCTGAAACATAAAATACATATTACACGATAT
ATTAGAACACACAAAATGTCTTTCGCTTCGTGCTACAATGACACCAAATC
GTTCTCAAGCTTGGACCTGCTTTATGCTGTTTACAGGTAAATAGAGCGGT
ACCAAGAATAACTAGCAGGTCAATGATTGCGGGATAACAGTTTGAAATAA
GCTCAATATCCCTTAACGAGAAACTAGCGAGTtcatctacacgttttttt
aaagaacaaactatataagaacataaggcttaaatggccaaaatgttaag
aacaagttaagaacattttaaggctttgtcgACTCAAAAACGCCCAATTT
CTTAGGACTATACtcaaaaaataacgaaaataagAACCCAAAAATGACGA
aaacaagaacatgttaagaacactttaaggctaaaagctcaaaaagttaa
gaacatctgaaggcttcaaataatttggatgttcttataaaaaacgtgta
tcacgTATAGGGGAGAGATAGATAGCTTTTCATTCGCTTATAtcctaaaa
aaaatttccacccaggacattcttattccaaccccccccccccccccNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccgcttat
tccaaaccccacggctattaggtacccgagagtacataAACTCGCTGCTC
TATCGGGGGAGTATAGAAATTGttaatttttgttaatttattcatatttt
cttttcattttaggGCGCGTGGGCGTGGGGGAATGAACTTGGGACCGGGC
GGAATTTCCGCAAACTTTAACACTGACAACTCAACATATCAAATCAACGC
AAACAATACACGTAATCACAACATGGGCGGGAATGGGCGTAAAGGCGCCA
TGAATATGAATGGAGGGCGCAGAATGGGCGTTAATAGGATGACAGTAGCA
AACAGCAAAACAGGACACAGCGTACATATGAGaggtaaaaaagtgaaaaa
tctgTCTCTGCTTGTCTCTGACtgtctcgttttgaaaccattaccaaggt
gataaagcccttgagacttcaaatgttactttaataAATTGGAGCAaact
tcttatgaactcctctcggaatcaattaccatagcaatattttggtAAGG
TAAGCGTTTCCCATGActtaatttatcaaaaagtctatCAATTTTTTACC
AAGAACCTGTTTaacaatttttgctcaaaagcATGTGCCAAGACCATATG
ATAAATTTAGCTTGCCTAAGTATAACTTACATTTATTTTTATTCCGTAGG
GCTTCCGTTTGAATCGACAGctgctgacgtcatcaggtTTTTCGCACCTT
TACAGCCAGTAGATATTCGATTGTTGTACGAGTCAAACACAGGTACTGGa
ttgttttttcaaattcaacaaatggCTTGCTTTAGATCTGGTAAAAAGAA
TgtaaaatttgaccaacttttgattttgacataAATGGAAGAAATAGGAA
CAAGGGGagaaaatgggtgccgggtatctGTGAACCTTACCAGGTCTGTC
CAAGGGTTCAAAAAACACATCAAGTTGGTCTTTCTGGGGTCTTGTCAGGC
TGGCAGCATCCTtctggtttgttttgaaaaccattTAAGGGATGTGTACA
GCTTAAGGTCTAGCCCGCACATAACCAACATTTTCCACCTCATGAAAATA
TAGTAATAATAGTCAAAGGTGGTTTCCAATAGGGATAATAGTTTTGTGAA
CAAGTTTGTGCATCAAGTGGCATATCATTGTGAGATCAAAGAATTCATCT
TATCatacaaagtaaaaaaataagcaaaaaatatggAATGGACGAATTAT
ACAAACTGATaccgtaacaattatcgtattatcatttAACATCCACATGA
CTGtgttgggctattccagaaatagccTGTACctcagggtggtctggaaa
ataaaaaatccaggatggtcagtataacgaggtcgaaaatccagggtggt
ccgaagaaatgggagaaaaaaatccaaggggtcctgaaaatttgggaaaa
aatccagggggggtcaacaaatttttttctggaatagcccattataAGGT
TTacaaacgactccagtctacttaAGCTTGAATATATAATACCTTTTTGA
AATTCTCGTCCATTTTTGTGATGTTTAGGTCGGCCAAAGGGAGAGTGCGA
TGTCGATTTCACAACCCACCATGATGCAGAGGAGGCtatgaaaaaagata
aacaaaatatGGGTAAGTGTGTAATTTACTGACCAGAATGGAAGGCGAAA
TTAAGAGACCAGAAATCAGCTATCATGATGATCTGACACTGGAAGCTAGC
TAATGATCCTTATTAAAAGAATGTACacactttttttgtaagaatggtgt
aaatccattgcatcatggatattcttaactttttagtcAAAGTCATTATA
TAATATTGTTAACATAAATGGCAatattcttacgatgttcttaatttttt
ggctattttcatcatggacattcttataaagtgtatttttataaaaaagc
ataGTACAATAGTACAATACCGTAaattcaatagacgatatcggctttcc
gaattctccccgaatgattacccatgatgcattgcgcaaaaaaattcacg
gacgatattgacttgatgaatttttttgcgcaatgcatcatgggtaatca
ttcggggagaattcggaaagccgatatcgtctattggagACAAATTATTA
AAAGCACCGTTTACAACTTCTGGAATTcttgattgaaattttcatttttg
ctgcttatgaaaaccaaactaaaggccggtctccactttcgcgcgacata
aTCGAAAACTCTTTGGCGTtgttgtaaggtcattggtcggttgaaaaatg
aagcaattccattggtcgaaattgacgtaacggatgaaaaaagtagaact
tcattcaacttttcttttgttcgcgcgaaacttttttatgacgtaatctt
tcaggcaaaaaagattaagaaaaaaactgtcgcccatttcgcgcgaaagt
ggagaccggccttaacgcATCTCTTGATACAGTTTCCACAACGTTAAATT
AATAAGCAGTcttaaattatgaaaaacaatgTCGAAATCCTTCTGAGGTT
ATATTAACACCTGCCAGTAGAGAGTTCATgcatttgcacttttgaggacg
gctgagtgactgaagcgatttggaaaatcCGCATTTTTCACCCACAAAAT
CGaagacggtaaaagtgcttgtttaccgtcgtcctcagtcagacGGGATG
TAGATAAATTAGAAGCTTACCACAGGTATATAAACTCGCTTTtgttcgaa
gtaatacggtaatatAGTTCTCATTAATGACTTCTTCGCTTCTTTGTTGG
CATTTATTTACTTAAGAGCTCTTAGTAATTCATGAGATATACCCCTTTCC
AAAACTCGGGATAATATGAAAGGGCTAAATGGGCTAAATCTCTTATTTGA
AATGGGTGGAAATAATTCGAATTCTCTGTTTAGCGAGTTTATGCATTTGC
AATTTTGAGGACGGCGGAGTGACTGAAGTGATTTGGAAAATCTAACTGTT
CTGACCCGcgaaatcgaggacggtaaaagtgctgatttaccgtcgtcatC
AGGTGATCAGGATCTAAACAAATCAGAAGTTAACTATCTCCACCGTAGAA
AAGCAAAGATATAAACCTAGCTAATTTGTAGCGACACGACTGAAATCGTA
gactatttttcttttgatttctttcctCCAGGACACCGATACATTGAATT
GTTCTTGAAATCCACAATCCATGGCAACGGGAAATGGAACAATAACAATA
ACATCATCGGAAAAAGTAAGTAGTATTccacttgaaaatttctttccaaC
TTATTTTCATTGAATGAACACGTGGAGAAAATCAGTACACGAGGCCATTT
TCGAGTAAATTTCGGTCTATTCAGATTCCAAAGGCTCCCCGTTTTTTACT
CACGATAATAAAAGTAAGAATTAGGTAACTTTCGCACATTATATTACGAC
TGCTTGCGGAACGTGAATGCCTTGAAAATAATGCACCCCTTTTGAAACAA
AAACTTGAAGGAAAGCAATCCAAGCTTTTGATATTCAAACAGGACAGGAC
AAGAATGGGCTTAAAGTGTAGAATGATCTTTAGAGGGGAATTTTTACAAG
AGATGTAACATAACATGGCTCAGTTCATTCAAAAAAGGACAGTTAGCTAA
GTTCGGActcttttatcattttcagaTTAAAAATTCTTTAGGTTCTCCTC
CGTTGCTTCTCTCCCATAACAACAACAATCGCTCCTCCATCATTCAACAA
CCAAACCTAAATAACATCTACGCTGGAGGCTTCAACAtcacaaaacaaca
acaaacaaccAATCAGAATCGATTTAACACTAATTCCTTACCTCCCATTG
GTTGTAATTTCAATAACAACACTCCTTCGTCGTTGGGATTTGTTCGAAAA
CCTCCTCCTCCTCCCTCCTCCGTGGATCCTTTTGGAGCGAACCGAGTGAC
ACGTGAtgatttgaatttcaaagataCATCACGTGATCTAGACTTGTTGA
GTCAGACGATCCATAATGGCAGCCAAACTATTCAAAATGGTTGCAAAAGT
AATGGGGTTCAAAGTTTTTATAGCAATGCGATTATATAATAGGGTGTGAC
TTgattttgaattcaattttttggtTATGGTCAGAAGAATTTTGTGTATA
TTTTATTAAAGGTGTGAATTTTCtgtttgtttatttaattttttatgcat
ttgaaattattattttttaaatgatgaaaaagaaTATTTGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005703XLOC_005703Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010149-exon-sc0000103-1491911889:10560..11551TCONS_00010149-exon-sc0000103-1491911889:10560..11551Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1510915933:10560..11551TCONS_00010149-exon-sc0000103-1510915933:10560..11551Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1575043694:10560..11551TCONS_00010149-exon-sc0000103-1575043694:10560..11551Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1491911889:17823..18043TCONS_00010149-exon-sc0000103-1491911889:17823..18043Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1510915933:17823..18043TCONS_00010149-exon-sc0000103-1510915933:17823..18043Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1575043694:17823..18043TCONS_00010149-exon-sc0000103-1575043694:17823..18043Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1491911889:18359..18451TCONS_00010149-exon-sc0000103-1491911889:18359..18451Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1510915933:18359..18451TCONS_00010149-exon-sc0000103-1510915933:18359..18451Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1575043694:18359..18451TCONS_00010149-exon-sc0000103-1575043694:18359..18451Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1491911889:19238..19321TCONS_00010149-exon-sc0000103-1491911889:19238..19321Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1510915933:19238..19321TCONS_00010149-exon-sc0000103-1510915933:19238..19321Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1575043694:19238..19321TCONS_00010149-exon-sc0000103-1575043694:19238..19321Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1491911889:20841..20924TCONS_00010149-exon-sc0000103-1491911889:20841..20924Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1510915933:20841..20924TCONS_00010149-exon-sc0000103-1510915933:20841..20924Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1575043694:20841..20924TCONS_00010149-exon-sc0000103-1575043694:20841..20924Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1491911889:21335..21901TCONS_00010149-exon-sc0000103-1491911889:21335..21901Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1510915933:21335..21901TCONS_00010149-exon-sc0000103-1510915933:21335..21901Clytia hemisphaericaexon
TCONS_00010149-exon-sc0000103-1575043694:21335..21901TCONS_00010149-exon-sc0000103-1575043694:21335..21901Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000103supercontigsc0000103:10560..21901 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0659538	0	0	0	0.43356	0.125504	2.01939	3.12169	0.353738	0.581651	8.17015e-06	0.289919	0	0	0	0	4.58206	3.52741	0	0	3.94048	3.85108	1.76387	1.51765	3.46802	3.3765	0	0	0	0
Blast
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BLAST of TCONS_00010149 vs. Swiss-Prot (Human)
Match: HNRH1 (Heterogeneous nuclear ribonucleoprotein H OS=Homo sapiens GN=HNRNPH1 PE=1 SV=4)

HSP 1 Score: 96.6709 bits (239), Expect = 4.717e-21
Identity = 46/81 (56.79%), Postives = 55/81 (67.90%), Query Frame = 1 
Query: 1183 SKTGHSVHMRGLPFESTAADVIRFFAPLQPVDIRLLYESNTGRPKGECDVDFTTHHDAEEAMKKDKQNMGHRYIELFLKST 1425
            S TGH VHMRGLP+ +T  D+  FF+PL PV + +    + GR  GE DV+F TH DA  AM KDK NM HRY+ELFL ST
Sbjct:  285 STTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD-GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNST 364
The following BLAST results are available for this feature:
BLAST of TCONS_00010149 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HNRH14.717e-2156.79Heterogeneous nuclear ribonucleoprotein H OS=Homo ... [more]
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