TCONS_00010002 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010002
Unique NameTCONS_00010002
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1495

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010002 ID=TCONS_00010002|Name=TCONS_00010002|organism=Clytia hemisphaerica|type=transcript|length=1495bp
agaaattttggaaataaacaGCTTGGAAAAGACAGACCGAACAGCAGAAG
ATGAAGGAGAAGCTGGGACCTCTACGCTGGCTGACTCAACAAAACAGCAA
AACCTATCTAATGATTCAGAGAAACGACTGATACAATCTTGCCTGGATAC
AACAATTAATAAAAGATCGGAGCAGACACAGCCTAATGATCCAACATCAA
TGCAAACAAAAATGCAAGCTGATATAGATGAAATCAAGAAAATGTTAGCA
GACATGTATGTCACAAGtaccaaaacaaaaacattgattacGTCGAGTGa
ctcaaaaataaaagaagcaAATAACCTCTTAGAGCTGTCAGTGGAGCCTG
ATATAAAAGTCGAAATCAACGAAAATGGCTGCATGGTACAGTGTCTTGTG
TGTAACGCCTTGCAACAGTCAAGTTACTTAAAAAAAGTCACGTCAgctct
ttcaacaaatttgggAAATGGTTTAATCTATGACCAAGAACAGACGAAAT
TGCTTCTAGCCGGAAAGTGCCAACAATGGTACAGTTTTAAAAGCAATCTC
ATTTCACATTTCTCATGCACGTCGGGGAAAGATGATGGAAGTTTTCACTT
CAAAGCAAAGAGGTTCCACCTCAAGAATCAAAAGCAGAAAACTATTCAAA
TGAACGCCATGGAAAATATCGTCAGTACTGCCATCGCTGTCTGCAAAATA
AAATCTGCAGCATTGTCCTTCGAAGCCCTTCTAGGACTCGTTTCAATGTG
TGGGGGAGACATTGGAAACATTGGTCACGGGAgAAATCAATTTCCTGAGA
TAATAAATGCAGCCTATCACTACCTTAtggaaaaaacaaaagtttatcTT
ACAACTCCTCTCCCTTCAACTGGTTTGTTTCCGCATGTATCTGTTACCTC
AGATAAATCAACTCCTGGCAGAAAAACGAATCATGCAGTTATGATTATTT
TACCTTTCCATGGAAAGCGGATTGCTATGCCTCTGGATGCTCCACTTGTC
TACGAAATGGATgagaacaaaacattgaaaGGAGGTACTGGAGAAGACTT
AGCAGATCAAGTTGTAGACTGTCTGAAAGGCCGCCTTGGTTTTGATTCGA
AACAACTTCATTATGTTAGAGCTTTTCATGCTGATGGTCAGTACCAGTCA
AATACATTTCAAAGGAAGTTCAAATCTAATGTAGATTCAGATGAATACGT
TCTCCTTCCATGGGACACGTCTCATTGGATGGATTTGGCGATGGAAAGCT
TGAGAGAGTCGTCAAAGTCATCTGAATTTCTCAAGAGGCTCATCAGCAGA
TCCAATCgcttcaacactttttttcggAGTGGCAAAGGACACGAGGAGTA
CCAAGGACTATCAGAATCACTTGGATTAAAGTCATTGGAAGTTGTAAGCT
TTTCGACAACACGCTTTTTTTCGTCAGCCTTTGAACAAtgggaaaaaatc
ttcatttcttaTCCAGCTCTCATTGAAACGTACAATCGATTCCGT
Run BLAST on NCBI

protein sequence of TCONS_00010002-protein

>TCONS_00010002-protein ID=TCONS_00010002-protein|Name=TCONS_00010002-protein|organism=Clytia hemisphaerica|type=polypeptide|length=498bp
EILEINSLEKTDRTAEDEGEAGTSTLADSTKQQNLSNDSEKRLIQSCLDT
TINKRSEQTQPNDPTSMQTKMQADIDEIKKMLADMYVTSTKTKTLITSSD
SKIKEANNLLELSVEPDIKVEINENGCMVQCLVCNALQQSSYLKKVTSAL
STNLGNGLIYDQEQTKLLLAGKCQQWYSFKSNLISHFSCTSGKDDGSFHF
KAKRFHLKNQKQKTIQMNAMENIVSTAIAVCKIKSAALSFEALLGLVSMC
GGDIGNIGHGRNQFPEIINAAYHYLMEKTKVYLTTPLPSTGLFPHVSVTS
DKSTPGRKTNHAVMIILPFHGKRIAMPLDAPLVYEMDENKTLKGGTGEDL
ADQVVDCLKGRLGFDSKQLHYVRAFHADGQYQSNTFQRKFKSNVDSDEYV
LLPWDTSHWMDLAMESLRESSKSSEFLKRLISRSNRFNTFFRSGKGHEEY
QGLSESLGLKSLEVVSFSTTRFFSSAFEQWEKIFISYPALIETYNRFR
Run BLAST on NCBI

transcript from alignment at sc0000101:88162..91166-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010002 ID=TCONS_00010002|Name=TCONS_00010002|organism=Clytia hemisphaerica|type=transcript|length=3005bp|location=Sequence derived from alignment at sc0000101:88162..91166- (Clytia hemisphaerica)
AGAAATTTTGGAAATAAACAGCTTGGAAAAGACAGACCGAACAGCAGGTG
AGTGCATATTTAAATCTAGATAACACTTTAAAGTTGGATAAAAATTGGAT
ATCTATCCATCGTATTAGACATAGAAACTTTGAGTTATGTTTGAGAATAT
TTGAACAGCCCATTAGTTGAAAATTCACAATAGAAAGTTGCCATTTAAAA
GCTGGATTGACATTAATGCTTTACTAGTAAAGGGCATACCTAACTTAGCC
ATTCATTGTTTTCATTTTGGTATTACTGGTTCTCCTTGATGGAGTTGCTT
GCGTTCAGTTCTATGAAATCGAGAACCTGTGTTTGTTTTATATAAAATTA
CATTATCCTCCCTTTCTTTATAAGTAACATACATGTAGTTATATTCTATT
TTCTGAGTAATAGTAGTAACCAAAAATTGTGTACTTCCTTTCTATGTTGA
AGAAGATGAAGGAGAAGCTGGGACCTCTACGCTGGCTGACTCAACAAAAC
AGCAAAACCTATCTAATGATTCAGAGAAACGACTGATACAATCTTGCCTG
GATACAACAATTAATAAAAGATCGGAGCAGACACAGCCTAATGATCCAAC
ATCAATGCAAACAAAAATGCAAGCTGATATAGATGAAATCAAGAAAATGT
TAGCAGACATGTATGTCACAAGTACCAAAACAAAAACATTGATTACGTCG
AGTGACTCAAAAATAAAAGAAGCAAATAACCTCTTAGAGCTGTCAGTGGA
GCCTGATATAAAAGTCGAAATCAACGAAAATGGCTGCATGGTACAGTGTC
TTGTGTGTAACGCCTTGCAACAGTCAAGTTACTTAAAAAAAGTCACGTAA
GTACTTTTTATACTCGACATTGAAATGATTGTTAATCAGCGAGGGAGAGA
GGAAGAGAGTTTCACAATGTCCACGGATGTACATCGTTTCAAATCGTTAC
CTATGTTTTCAAAAATTGCCCTGAAACCGACTTTTGTTGTAATAGGAACT
TCCAAACTGTTACCTTATTTGATTTTGTATCGTCTTACAGTTTTATTTAC
AAATCTGGAACACCAAATATATGTGAAGAAATTCAAAGAATTTCTGTCCA
ACTATCTTCTATCAGGAGATTTGGGTGGCAGAACAGATGTATGCATTTCG
TCCTTATTAGGACTCGTCAGCACTGTATACTCTAAAAGCTACTTTATGCT
CTTCTCTATAGGTCAGCTCTTTCAACAAATTTGGGAAATGGTTTAATCTA
TGACCAAGAACAGACGAAATTGCTTCTAGCCGGAAAGTGCCAACAATGGT
ACAGTTTTAAAAGCAATCTCATTTCACATTTCTCATGCACGTCGGGGAAA
GATGATGGAAGTTTTCACTTCAAAGCAAAGAGGTTCCACCTCAAGAATCA
AAAGCAGAAAACTATTCAAATGAACGCCATGGAAAATATCGTCAGTACTG
CCATCGCTGTCTGCAAAATAAAATCTGCAGCATTGTCCTTCGAAGCCCTT
CTAGGACTCGTTTCAATGTGTGGGGGAGACATTGGAAACATTGGTCACGG
GAGGTAGAAAATCAAATTTTTGTATCAAGATTTTTCTATTTCTTTAGCCT
GAAAATTCAGGTTTGGAGAATACTAATACAATTATTGGAAAATAGACCAT
ACCAATTTATTGCTAGTAGGAGATCACTTGCTTATTTTCATAAACAATAG
TCTTATGTCTATATTCTATAGTAGCTCTTAAAGAAAATTTTATGGTACAG
GACGCTTCCTAGCCCCTCCATTTAACAAGCTGTTATAAACAAGTCTCGAT
TACTCGAACTCTCCTTATTTTGAACGAATTTGCATTCCCCGTGCACTTTT
GAGTAATGAAGACTCCAATGTAGTTCAAAGGAATTGGTTTTTGTATTAAG
TAAATAAGTAAATCCATTTTTGTATAAAAGTATAAATTTGTAACTGTTAA
TTGATTTACTGACTTTACATTTCTTCTATCTACAGAAATCAATTTCCTGA
GATAATAAATGCAGCCTATCACTACCTTATGGAAAAAACAAAAGTTTATC
TTACAACTCCTCTCCCTTCAACTGGTTTGTTTCCGCATGTATCTGTTACC
TCAGATAAATCAACTCCTGGCAGAAAAACGAATCATGCAGTTATGATTAT
TTTACCTTTCCATGGAAAGCGGATTGCTATGCCTCTGGATGCTCCACTTG
TCTACGAAATGGATGAGAACAAAACATTGAAAGGAGGTACTGGAGAAGAC
TTAGCAGATCAAGTTGTAGACTGTCTGAAAGGCCGCCTTGGTTTTGATTC
GAAACAACTTCATTATGTTAGAGGTGAATACATTCATTATCTGTAAAATA
AATTAATGAAATTCTTATTGTACATTCGACAAATATAGAAACATGAAACT
CTAAATTAGGTATTCATTTTAGTTTGTTTGATGGAATGATAGATAACTTT
TCAAGACAACACAGATTTGTCCAACCTTGATCAATGAAAACTGTATCTCA
ATGTCCGTTTAGGCCGCTAAGACTAATCCCTGATCATAACAGAACCTCAT
TACAAGGAGTTTTATTCAATGCTAAATTATGTTTGATTAGTCCGAACAAA
AGGTTTATCTGTATTTTTCTATATTTTATAGCTTTTCATGCTGATGGTCA
GTACCAGTCAAATACATTTCAAAGGAAGTTCAAATCTAATGTAGATTCAG
ATGAATACGTTCTCCTTCCATGGGACACGTCTCATTGGATGGATTTGGCG
ATGGAAAGCTTGAGAGAGTCGTCAAAGTCATCTGAATTTCTCAAGAGGCT
CATCAGCAGATCCAATCGCTTCAACACTTTTTTTCGGAGTGGCAAAGGAC
ACGAGGAGTACCAAGGACTATCAGAATCACTTGGATTAAAGTCATTGGAA
GTTGTAAGCTTTTCGACAACACGCTTTTTTTCGTCAGCCTTTGAACAATG
GGAAAAAATCTTCATTTCTTATCCAGCTCTCATTGAAACGTACAATCGAT
TCCGT

Coding sequence (CDS) from alignment at sc0000101:88162..91166-

>TCONS_00010002 ID=TCONS_00010002|Name=TCONS_00010002|organism=Clytia hemisphaerica|type=CDS|length=7470bp|location=Sequence derived from alignment at sc0000101:88162..91166- (Clytia hemisphaerica)
CTTTTCATGCTGATGGTCAGTACCAGTCAAATACATTTCAAAGGAAGTTC
AAATCTAATGTAGATTCAGATGAATACGTTCTCCTTCCATGGGACACGTC
TCATTGGATGGATTTGGCGATGGAAAGCTTGAGAGAGTCGTCAAAGTCAT
CTGAATTTCTCAAGAGGCTCATCAGCAGATCCAATCGCTTCAACACTTTT
TTTCGGAGTGGCAAAGGACACGAGGAGTACCAAGGACTATCAGAATCACT
TGGATTAAAGTCATTGGAAGTTGTAAGCTTTTCGACAACACGCTTTTTTT
CGTCAGCCTTTGAACAATGGGAAAAAATCTTCATTTCTTATCCAGCTCTC
ATTGAAACGTACAATCGATTCCGTAAATCAATTTCCTGAGATAATAAATG
CAGCCTATCACTACCTTATGGAAAAAACAAAAGTTTATCTTACAACTCCT
CTCCCTTCAACTGGTTTGTTTCCGCATGTATCTGTTACCTCAGATAAATC
AACTCCTGGCAGAAAAACGAATCATGCAGTTATGATTATTTTACCTTTCC
ATGGAAAGCGGATTGCTATGCCTCTGGATGCTCCACTTGTCTACGAAATG
GATGAGAACAAAACATTGAAAGGAGGTACTGGAGAAGACTTAGCAGATCA
AGTTGTAGACTGTCTGAAAGGCCGCCTTGGTTTTGATTCGAAACAACTTC
ATTATGTTAGAGGTCAGCTCTTTCAACAAATTTGGGAAATGGTTTAATCT
ATGACCAAGAACAGACGAAATTGCTTCTAGCCGGAAAGTGCCAACAATGG
TACAGTTTTAAAAGCAATCTCATTTCACATTTCTCATGCACGTCGGGGAA
AGATGATGGAAGTTTTCACTTCAAAGCAAAGAGGTTCCACCTCAAGAATC
AAAAGCAGAAAACTATTCAAATGAACGCCATGGAAAATATCGTCAGTACT
GCCATCGCTGTCTGCAAAATAAAATCTGCAGCATTGTCCTTCGAAGCCCT
TCTAGGACTCGTTTCAATGTGTGGGGGAGACATTGGAAACATTGGTCACG
GGAGAAGATGAAGGAGAAGCTGGGACCTCTACGCTGGCTGACTCAACAAA
ACAGCAAAACCTATCTAATGATTCAGAGAAACGACTGATACAATCTTGCC
TGGATACAACAATTAATAAAAGATCGGAGCAGACACAGCCTAATGATCCA
ACATCAATGCAAACAAAAATGCAAGCTGATATAGATGAAATCAAGAAAAT
GTTAGCAGACATGTATGTCACAAGTACCAAAACAAAAACATTGATTACGT
CGAGTGACTCAAAAATAAAAGAAGCAAATAACCTCTTAGAGCTGTCAGTG
GAGCCTGATATAAAAGTCGAAATCAACGAAAATGGCTGCATGGTACAGTG
TCTTGTGTGTAACGCCTTGCAACAGTCAAGTTACTTAAAAAAAGTCACGA
AATTTTGGAAATAAACAGCTTGGAAAAGACAGACCGAACAGCAGCTTTTC
ATGCTGATGGTCAGTACCAGTCAAATACATTTCAAAGGAAGTTCAAATCT
AATGTAGATTCAGATGAATACGTTCTCCTTCCATGGGACACGTCTCATTG
GATGGATTTGGCGATGGAAAGCTTGAGAGAGTCGTCAAAGTCATCTGAAT
TTCTCAAGAGGCTCATCAGCAGATCCAATCGCTTCAACACTTTTTTTCGG
AGTGGCAAAGGACACGAGGAGTACCAAGGACTATCAGAATCACTTGGATT
AAAGTCATTGGAAGTTGTAAGCTTTTCGACAACACGCTTTTTTTCGTCAG
CCTTTGAACAATGGGAAAAAATCTTCATTTCTTATCCAGCTCTCATTGAA
ACGTACAATCGATTCCGTAAATCAATTTCCTGAGATAATAAATGCAGCCT
ATCACTACCTTATGGAAAAAACAAAAGTTTATCTTACAACTCCTCTCCCT
TCAACTGGTTTGTTTCCGCATGTATCTGTTACCTCAGATAAATCAACTCC
TGGCAGAAAAACGAATCATGCAGTTATGATTATTTTACCTTTCCATGGAA
AGCGGATTGCTATGCCTCTGGATGCTCCACTTGTCTACGAAATGGATGAG
AACAAAACATTGAAAGGAGGTACTGGAGAAGACTTAGCAGATCAAGTTGT
AGACTGTCTGAAAGGCCGCCTTGGTTTTGATTCGAAACAACTTCATTATG
TTAGAGGTCAGCTCTTTCAACAAATTTGGGAAATGGTTTAATCTATGACC
AAGAACAGACGAAATTGCTTCTAGCCGGAAAGTGCCAACAATGGTACAGT
TTTAAAAGCAATCTCATTTCACATTTCTCATGCACGTCGGGGAAAGATGA
TGGAAGTTTTCACTTCAAAGCAAAGAGGTTCCACCTCAAGAATCAAAAGC
AGAAAACTATTCAAATGAACGCCATGGAAAATATCGTCAGTACTGCCATC
GCTGTCTGCAAAATAAAATCTGCAGCATTGTCCTTCGAAGCCCTTCTAGG
ACTCGTTTCAATGTGTGGGGGAGACATTGGAAACATTGGTCACGGGAGAA
GATGAAGGAGAAGCTGGGACCTCTACGCTGGCTGACTCAACAAAACAGCA
AAACCTATCTAATGATTCAGAGAAACGACTGATACAATCTTGCCTGGATA
CAACAATTAATAAAAGATCGGAGCAGACACAGCCTAATGATCCAACATCA
ATGCAAACAAAAATGCAAGCTGATATAGATGAAATCAAGAAAATGTTAGC
AGACATGTATGTCACAAGTACCAAAACAAAAACATTGATTACGTCGAGTG
ACTCAAAAATAAAAGAAGCAAATAACCTCTTAGAGCTGTCAGTGGAGCCT
GATATAAAAGTCGAAATCAACGAAAATGGCTGCATGGTACAGTGTCTTGT
GTGTAACGCCTTGCAACAGTCAAGTTACTTAAAAAAAGTCACGAAATTTT
GGAAATAAACAGCTTGGAAAAGACAGACCGAACAGCAGCTTTTCATGCTG
ATGGTCAGTACCAGTCAAATACATTTCAAAGGAAGTTCAAATCTAATGTA
GATTCAGATGAATACGTTCTCCTTCCATGGGACACGTCTCATTGGATGGA
TTTGGCGATGGAAAGCTTGAGAGAGTCGTCAAAGTCATCTGAATTTCTCA
AGAGGCTCATCAGCAGATCCAATCGCTTCAACACTTTTTTTCGGAGTGGC
AAAGGACACGAGGAGTACCAAGGACTATCAGAATCACTTGGATTAAAGTC
ATTGGAAGTTGTAAGCTTTTCGACAACACGCTTTTTTTCGTCAGCCTTTG
AACAATGGGAAAAAATCTTCATTTCTTATCCAGCTCTCATTGAAACGTAC
AATCGATTCCGTAAATCAATTTCCTGAGATAATAAATGCAGCCTATCACT
ACCTTATGGAAAAAACAAAAGTTTATCTTACAACTCCTCTCCCTTCAACT
GGTTTGTTTCCGCATGTATCTGTTACCTCAGATAAATCAACTCCTGGCAG
AAAAACGAATCATGCAGTTATGATTATTTTACCTTTCCATGGAAAGCGGA
TTGCTATGCCTCTGGATGCTCCACTTGTCTACGAAATGGATGAGAACAAA
ACATTGAAAGGAGGTACTGGAGAAGACTTAGCAGATCAAGTTGTAGACTG
TCTGAAAGGCCGCCTTGGTTTTGATTCGAAACAACTTCATTATGTTAGAG
GTCAGCTCTTTCAACAAATTTGGGAAATGGTTTAATCTATGACCAAGAAC
AGACGAAATTGCTTCTAGCCGGAAAGTGCCAACAATGGTACAGTTTTAAA
AGCAATCTCATTTCACATTTCTCATGCACGTCGGGGAAAGATGATGGAAG
TTTTCACTTCAAAGCAAAGAGGTTCCACCTCAAGAATCAAAAGCAGAAAA
CTATTCAAATGAACGCCATGGAAAATATCGTCAGTACTGCCATCGCTGTC
TGCAAAATAAAATCTGCAGCATTGTCCTTCGAAGCCCTTCTAGGACTCGT
TTCAATGTGTGGGGGAGACATTGGAAACATTGGTCACGGGAGAAGATGAA
GGAGAAGCTGGGACCTCTACGCTGGCTGACTCAACAAAACAGCAAAACCT
ATCTAATGATTCAGAGAAACGACTGATACAATCTTGCCTGGATACAACAA
TTAATAAAAGATCGGAGCAGACACAGCCTAATGATCCAACATCAATGCAA
ACAAAAATGCAAGCTGATATAGATGAAATCAAGAAAATGTTAGCAGACAT
GTATGTCACAAGTACCAAAACAAAAACATTGATTACGTCGAGTGACTCAA
AAATAAAAGAAGCAAATAACCTCTTAGAGCTGTCAGTGGAGCCTGATATA
AAAGTCGAAATCAACGAAAATGGCTGCATGGTACAGTGTCTTGTGTGTAA
CGCCTTGCAACAGTCAAGTTACTTAAAAAAAGTCACGAAATTTTGGAAAT
AAACAGCTTGGAAAAGACAGACCGAACAGCAGCTTTTCATGCTGATGGTC
AGTACCAGTCAAATACATTTCAAAGGAAGTTCAAATCTAATGTAGATTCA
GATGAATACGTTCTCCTTCCATGGGACACGTCTCATTGGATGGATTTGGC
GATGGAAAGCTTGAGAGAGTCGTCAAAGTCATCTGAATTTCTCAAGAGGC
TCATCAGCAGATCCAATCGCTTCAACACTTTTTTTCGGAGTGGCAAAGGA
CACGAGGAGTACCAAGGACTATCAGAATCACTTGGATTAAAGTCATTGGA
AGTTGTAAGCTTTTCGACAACACGCTTTTTTTCGTCAGCCTTTGAACAAT
GGGAAAAAATCTTCATTTCTTATCCAGCTCTCATTGAAACGTACAATCGA
TTCCGTAAATCAATTTCCTGAGATAATAAATGCAGCCTATCACTACCTTA
TGGAAAAAACAAAAGTTTATCTTACAACTCCTCTCCCTTCAACTGGTTTG
TTTCCGCATGTATCTGTTACCTCAGATAAATCAACTCCTGGCAGAAAAAC
GAATCATGCAGTTATGATTATTTTACCTTTCCATGGAAAGCGGATTGCTA
TGCCTCTGGATGCTCCACTTGTCTACGAAATGGATGAGAACAAAACATTG
AAAGGAGGTACTGGAGAAGACTTAGCAGATCAAGTTGTAGACTGTCTGAA
AGGCCGCCTTGGTTTTGATTCGAAACAACTTCATTATGTTAGAGGTCAGC
TCTTTCAACAAATTTGGGAAATGGTTTAATCTATGACCAAGAACAGACGA
AATTGCTTCTAGCCGGAAAGTGCCAACAATGGTACAGTTTTAAAAGCAAT
CTCATTTCACATTTCTCATGCACGTCGGGGAAAGATGATGGAAGTTTTCA
CTTCAAAGCAAAGAGGTTCCACCTCAAGAATCAAAAGCAGAAAACTATTC
AAATGAACGCCATGGAAAATATCGTCAGTACTGCCATCGCTGTCTGCAAA
ATAAAATCTGCAGCATTGTCCTTCGAAGCCCTTCTAGGACTCGTTTCAAT
GTGTGGGGGAGACATTGGAAACATTGGTCACGGGAGAAGATGAAGGAGAA
GCTGGGACCTCTACGCTGGCTGACTCAACAAAACAGCAAAACCTATCTAA
TGATTCAGAGAAACGACTGATACAATCTTGCCTGGATACAACAATTAATA
AAAGATCGGAGCAGACACAGCCTAATGATCCAACATCAATGCAAACAAAA
ATGCAAGCTGATATAGATGAAATCAAGAAAATGTTAGCAGACATGTATGT
CACAAGTACCAAAACAAAAACATTGATTACGTCGAGTGACTCAAAAATAA
AAGAAGCAAATAACCTCTTAGAGCTGTCAGTGGAGCCTGATATAAAAGTC
GAAATCAACGAAAATGGCTGCATGGTACAGTGTCTTGTGTGTAACGCCTT
GCAACAGTCAAGTTACTTAAAAAAAGTCACGAAATTTTGGAAATAAACAG
CTTGGAAAAGACAGACCGAACAGCAGCTTTTCATGCTGATGGTCAGTACC
AGTCAAATACATTTCAAAGGAAGTTCAAATCTAATGTAGATTCAGATGAA
TACGTTCTCCTTCCATGGGACACGTCTCATTGGATGGATTTGGCGATGGA
AAGCTTGAGAGAGTCGTCAAAGTCATCTGAATTTCTCAAGAGGCTCATCA
GCAGATCCAATCGCTTCAACACTTTTTTTCGGAGTGGCAAAGGACACGAG
GAGTACCAAGGACTATCAGAATCACTTGGATTAAAGTCATTGGAAGTTGT
AAGCTTTTCGACAACACGCTTTTTTTCGTCAGCCTTTGAACAATGGGAAA
AAATCTTCATTTCTTATCCAGCTCTCATTGAAACGTACAATCGATTCCGT
AAATCAATTTCCTGAGATAATAAATGCAGCCTATCACTACCTTATGGAAA
AAACAAAAGTTTATCTTACAACTCCTCTCCCTTCAACTGGTTTGTTTCCG
CATGTATCTGTTACCTCAGATAAATCAACTCCTGGCAGAAAAACGAATCA
TGCAGTTATGATTATTTTACCTTTCCATGGAAAGCGGATTGCTATGCCTC
TGGATGCTCCACTTGTCTACGAAATGGATGAGAACAAAACATTGAAAGGA
GGTACTGGAGAAGACTTAGCAGATCAAGTTGTAGACTGTCTGAAAGGCCG
CCTTGGTTTTGATTCGAAACAACTTCATTATGTTAGAGGTCAGCTCTTTC
AACAAATTTGGGAAATGGTTTAATCTATGACCAAGAACAGACGAAATTGC
TTCTAGCCGGAAAGTGCCAACAATGGTACAGTTTTAAAAGCAATCTCATT
TCACATTTCTCATGCACGTCGGGGAAAGATGATGGAAGTTTTCACTTCAA
AGCAAAGAGGTTCCACCTCAAGAATCAAAAGCAGAAAACTATTCAAATGA
ACGCCATGGAAAATATCGTCAGTACTGCCATCGCTGTCTGCAAAATAAAA
TCTGCAGCATTGTCCTTCGAAGCCCTTCTAGGACTCGTTTCAATGTGTGG
GGGAGACATTGGAAACATTGGTCACGGGAGAAGATGAAGGAGAAGCTGGG
ACCTCTACGCTGGCTGACTCAACAAAACAGCAAAACCTATCTAATGATTC
AGAGAAACGACTGATACAATCTTGCCTGGATACAACAATTAATAAAAGAT
CGGAGCAGACACAGCCTAATGATCCAACATCAATGCAAACAAAAATGCAA
GCTGATATAGATGAAATCAAGAAAATGTTAGCAGACATGTATGTCACAAG
TACCAAAACAAAAACATTGATTACGTCGAGTGACTCAAAAATAAAAGAAG
CAAATAACCTCTTAGAGCTGTCAGTGGAGCCTGATATAAAAGTCGAAATC
AACGAAAATGGCTGCATGGTACAGTGTCTTGTGTGTAACGCCTTGCAACA
GTCAAGTTACTTAAAAAAAGTCACGAAATTTTGGAAATAAACAGCTTGGA
AAAGACAGACCGAACAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005612XLOC_005612Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010002-proteinTCONS_00010002-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010002-exon-sc0000101-1575043694:91120..91166TCONS_00010002-exon-sc0000101-1575043694:91120..91166Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1575043694:90321..90714TCONS_00010002-exon-sc0000101-1575043694:90321..90714Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1575043694:89614..89955TCONS_00010002-exon-sc0000101-1575043694:89614..89955Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1575043694:88844..89181TCONS_00010002-exon-sc0000101-1575043694:88844..89181Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1575043694:88162..88535TCONS_00010002-exon-sc0000101-1575043694:88162..88535Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1510915933:91120..91166TCONS_00010002-exon-sc0000101-1510915933:91120..91166Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1510915933:90321..90714TCONS_00010002-exon-sc0000101-1510915933:90321..90714Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1510915933:89614..89955TCONS_00010002-exon-sc0000101-1510915933:89614..89955Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1510915933:88844..89181TCONS_00010002-exon-sc0000101-1510915933:88844..89181Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1510915933:88162..88535TCONS_00010002-exon-sc0000101-1510915933:88162..88535Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1491911889:91120..91166TCONS_00010002-exon-sc0000101-1491911889:91120..91166Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1491911889:90321..90714TCONS_00010002-exon-sc0000101-1491911889:90321..90714Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1491911889:89614..89955TCONS_00010002-exon-sc0000101-1491911889:89614..89955Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1491911889:88844..89181TCONS_00010002-exon-sc0000101-1491911889:88844..89181Clytia hemisphaericaexon
TCONS_00010002-exon-sc0000101-1491911889:88162..88535TCONS_00010002-exon-sc0000101-1491911889:88162..88535Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101supercontigsc0000101:88162..91166 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.225169	0.132173	0.41626	0.231665	0.379287	0.226283	0.382355	0.0471533	0.121269	0.146364	0.298467	0.0277874	0.30251	0	0.0697412	0.134408	0.0414199	0.106372	0	0.0306879	0.125751	0.117093	0.0781618	0	0.286456	0.30136	0.103347	0.075685	0.0481261	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010002 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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