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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009971 ID=TCONS_00009971|Name=TCONS_00009971|organism=Clytia hemisphaerica|type=transcript|length=357bp
GGGAGCAGTGAAGAAGTATGCATATCCTAAATATGTTTGGTCACCCGCTG
GTGGTTGGTGGTGTCAACCAAGAAATTGGAAAAGAAATACTGCTTTTGCT
TTCATTGCTACTGCTGTTATTTGTGTACCCGTTGTATGGTTTGATCTTAA
AAGAGAGaaaCGTTATTCGTCACCCCCTGTTCCCGTACGTTCACAAAGAT
GGGCTGAATGGGTGCAAGGAAAACAATGATCTAAAAACAGgTTTGATGAT
GAAACGTTCAGCAAGCGTGGTGTAATATAGTGCTTTATAAATGtaggaat
tttttaaatttcattatttttcaaaataagagaAACATGCTAGTTCAAAA
ATACATA Run BLAST on NCBI transcript from alignment at sc0000101:64061..65557+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009971 ID=TCONS_00009971|Name=TCONS_00009971|organism=Clytia hemisphaerica|type=transcript|length=1497bp|location=Sequence derived from alignment at sc0000101:64061..65557+ (Clytia hemisphaerica)
GGGAGCAGTGAAGAAGTATGCATATCCTAAATATGTTTGGTCACCCGCTG
GTGGTTGGTGGTGTCAACCAAGAAATTGGAAAAGAAATACTGCTTTTGCT
TTCATTGCTACTGCTGTTATTTGTGTACCCGTTGTATGGTTTGATCTTAA
AAGAGAGGTAAATTGTACCTTTAATTATTTGAGATTAGTTCAGAGTTCAA
ACTTCTTCCGTTGGATTTCTAAGTAAATAAGGAGGtatttttgtatcaaa
attcTGTATAAGTCACAATAACTTCAAGATTATCTCGTGTCATTATGTCA
TTATCTCAGACGGAAAAGTTAGTTGggtttttagctttttctgcCAATTA
TGACTTTTTCGTGTCTGAAGAAAGAGGtagattgttttttttatgatttg
aaagcgttcaaattttgatctttagGGAAGAAGGATTCAGGGTATTTGTA
GATCAAACCCCTAACAACAGAAACTAGCTCTCATATCACAAATAAAGTGA
taaaactaaaataaatttgatttgaaagtAGCTGTTCCATAGGTTAAGTA
AAGATCAActtaataactttattttttgtatatttttgaagCACTTTTTT
GTCCAGCCATTCCTGGCAAATGTCAACTCTTGAGGTTTATGAGTATATTC
TACCCTCACCTTTACTGCAACCTCATCAACAAACAGCATGGCTTGATGAG
GAAATATATTAAGGTTTCATGTCAATAGCAAAGTGAAGTTGATCGCAGta
gttttaagtttttcatagcttatttggctttttgttttttagaaaCGTTA
TTCGTCACCCCCTGTTCCCGTACGTTCACAAAGATGGGCTGAATGGGTGC
AAGGAAAACAATGATCTAAAAACAGGTATTATAAATTAATAGTTGtaaat
ttcatttgttttaaatttgttgttctacgggtgCAACTTGCTGCAaacga
aaaataataatattgaatttcctatGCCACAAATTTCTAATACTAAAAGT
TGTAAAGgtcatttgttttgatatttgttttgctTTCCATATTGTAACTG
ATGCTTCAAATATAACANAGgtcatttgttttgatatttgttttgctTTC
CATATTGTAACTGATGCTTCAAATATAACAActtctttaaaaagattatg
gGTAAAATACCAGGGATTTCTACCTCCTTTGGTTTAGGGGCATCAATAGA
ATTCTATCCCCATCGAAGAAAGGGTCAAATGTATGGTTGGATTTTAACAC
TTGTAATACTCCCAGAAATGTTATGAATCTGAACttttcagcattcgaaa
gatgaAACACTTTCTATCTACTAAACAATATGGAATACTTGGATTTCATA
ATTATCCatctttttttttaggttttttaggTTTGATGATGAAACGTTCA
GCAAGCGTGGTGTAATATAGTGCTTTATAAATGtaggaattttttaaatt
tcattatttttcaaaataagagaAACATGCTAGTTCAAAAATACATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009971-exon-sc0000101-1491911889:64061..64217 | TCONS_00009971-exon-sc0000101-1491911889:64061..64217 | Clytia hemisphaerica | exon |
| TCONS_00009971-exon-sc0000101-1510915933:64061..64217 | TCONS_00009971-exon-sc0000101-1510915933:64061..64217 | Clytia hemisphaerica | exon |
| TCONS_00009971-exon-sc0000101-1575043694:64061..64217 | TCONS_00009971-exon-sc0000101-1575043694:64061..64217 | Clytia hemisphaerica | exon |
| TCONS_00009971-exon-sc0000101-1491911889:64853..64935 | TCONS_00009971-exon-sc0000101-1491911889:64853..64935 | Clytia hemisphaerica | exon |
| TCONS_00009971-exon-sc0000101-1510915933:64853..64935 | TCONS_00009971-exon-sc0000101-1510915933:64853..64935 | Clytia hemisphaerica | exon |
| TCONS_00009971-exon-sc0000101-1575043694:64853..64935 | TCONS_00009971-exon-sc0000101-1575043694:64853..64935 | Clytia hemisphaerica | exon |
| TCONS_00009971-exon-sc0000101-1491911889:65441..65557 | TCONS_00009971-exon-sc0000101-1491911889:65441..65557 | Clytia hemisphaerica | exon |
| TCONS_00009971-exon-sc0000101-1510915933:65441..65557 | TCONS_00009971-exon-sc0000101-1510915933:65441..65557 | Clytia hemisphaerica | exon |
| TCONS_00009971-exon-sc0000101-1575043694:65441..65557 | TCONS_00009971-exon-sc0000101-1575043694:65441..65557 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101 | supercontig | sc0000101:64061..65557 + |
Blast
The following BLAST results are available for this feature:
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