TCONS_00009967 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009967
Unique NameTCONS_00009967
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length245

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009967 ID=TCONS_00009967|Name=TCONS_00009967|organism=Clytia hemisphaerica|type=transcript|length=245bp
TCTGAGGAAATACAGAGCTCCAAACAGTATGAATACTTTTATAACAAATC
ACCaatttaaatgttttgaaatggAATTGTACATTGGTGTTTTTAAAGAC
ACTGATTTTCTTCTACCTGCCGTGGCAAATAAAGTGAAGCATTTCCAAAA
CGTTGTTCTTGGAGCTGAAGGTATTGATGAAAATATTGAGAAGAAGTTCA
AAACAAGTTTGAACGATTTCAAGAACAGCCTGGATACGCTGACTG
Run BLAST on NCBI

transcript from alignment at sc0000100:612855..613099

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009967 ID=TCONS_00009967|Name=TCONS_00009967|organism=Clytia hemisphaerica|type=transcript|length=245bp|location=Sequence derived from alignment at sc0000100:612855..613099 (Clytia hemisphaerica)
CAGTCAGCGTATCCAGGCTGTTCTTGAAATCGTTCAAACTTGTTTTGAAC
TTCTTCTCAATATTTTCATCAATACCTTCAGCTCCAAGAACAACGTTTTG
GAAATGCTTCACTTTATTTGCCACGGCAGGTAGAAGAAAATCAGTGTCTT
TAAAAACACCAATGTACAATTccatttcaaaacatttaaattGGTGATTT
GTTATAAAAGTATTCATACTGTTTGGAGCTCTGTATTTCCTCAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005597XLOC_005597Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009967-exon-sc0000100-1491911889:612855..613099TCONS_00009967-exon-sc0000100-1491911889:612855..613099Clytia hemisphaericaexon
TCONS_00009967-exon-sc0000100-1510915933:612855..613099TCONS_00009967-exon-sc0000100-1510915933:612855..613099Clytia hemisphaericaexon
TCONS_00009967-exon-sc0000100-1575043694:612855..613099TCONS_00009967-exon-sc0000100-1575043694:612855..613099Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100supercontigsc0000100:612855..613099 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009967 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top