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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009929 ID=TCONS_00009929|Name=TCONS_00009929|organism=Clytia hemisphaerica|type=transcript|length=1906bp
tgattttatgtttttgaagAAAGGAATTACTTgtgacacccctttctcac
agacccggtaggattttttcagccagtggggagtAAAAATAACGAACCAA
AACTTGATGgagattgatatttccataatctttatgactggggatttgaG
CTCCATTGTTTTCGAATCCAAAaagttcagtggggatggaaaaaatgaaa
aaatagcacaatatatTTCAGTGAGAATTTGCTTATCAAATTGTTTTCAG
TGggggataaaaatttgaatatatttttccactggggacgatatttttgc
caattttttcagTAGGAAGGGGTTCTagtgagtctgtgagaaggggatgt
ctTGTCTTTTGATGCAAATGCGATTTTTTCTACGACTTTCTTTAGATATA
ATATGGTATTGTCCACATTACGTGGTGTTCTTACCAAACGTCCTTTACTG
AGAAGCATCGTGACTGTAACTAGCTTATTCGCGGCTTCAGATCTTTGTTG
TCAACTTTTTGAAAACCATGGTAACATCAAATACAAATTTGACTGGGAAA
GATTACGCAAAATGGCGACCATTGGATTGATATATTACGGACCAATGTAT
TATTACTATTACGGATTTTTGGATCGTAAATTCCCTGGTAAAAATCCTAG
AACTGTCCTTGTCAAAATTTTGTTCGATCAGTTTATTTTTGCTGTACCGT
CacagtttttcttttattgtataGCTGGTAAACTCGAGAGGAAGAACAAC
TCTGAGATAATCGAGGAAATTAAACTGAAGTATATACCAACCTATGTGAC
TTCTACTATATTCTGGCCTGCTGCACAGCTTGTGAATTTTTCATTAGTGC
CACCTACGCATCGTATTTTGTTTGTGTCCAGTGCGAATTTTGTTTGGTTG
AATATTTTATCTTATATTAAGAACCGTCCAAATTTGCCAGCTGTTTTGGA
AAGAGTTCAGAACTGGACTACGATGGATGTTAAGAAGGAGTTGGTTGTCG
AGCACCTGGAAAGTGAGAATAACAATGATTTAGATCTAGAAGAAGATCCC
GAAAgcgaaaagaagaaaacagaataggatttttaatttttttttttatc
aaacagccCTGTTTACTTTTAAGGGAAACCCCGGATGATTCTGCATTTAG
GAACTGGGTATGAGGTACATGCAAGCGTCAAAGTTACCTCATTATTCACT
ATAtctaattaaataaaaaatttgaagaaaaaaaatcataagaaaATCGA
ATACCCTAATCAAAATTTACCAGTGTTCTTGAAAGAGTGCAGAGCTGGAA
ATTGTTGGCCAGTAAGAATTATCTAAATGAAAATATCAGTGAAATATTGG
TGGACCCTatgaaaaaggagaaaatagaatagaatttattttatatttga
agCCTATTCTAACTAATTCTATTGGATAGCCAACAGGAGAGAATATTTAA
GCAAAAATGTATAAGGTAACCTTTAACAAAATTCGAGCAAActctccata
acttgaacatCGCTAGTCTCAATCATAGACTTCTATATAGATATACACCA
TATATCtataagaaattattttttgctgaAGGGTGAGCAGAAGCCTAAAA
CATCCCGCCCCTCGTCCCGCCCCTTAGTGTTTGAGATTGGAGACTTAACT
GTGCGCAAAATGTCATTCCAATCAATCGAGGCTCTAGACACCTTTACATC
AAGTTTGTTTGAAAGAGGAAgaattcgaaaattttcagTAGATGGGTTGA
AATGAAAAAGCATACACGAATTAGGTCGGGTGATTTTGAATTACTCTATT
AAAAAGTTTAAAGGTTGCGCcgttcaattttaatttaaccCATTAtttta
tagaacaatttttaaagaaaatcaaaatggtgaaTTTTATAATTTCATTT
TATCAC Run BLAST on NCBI transcript from alignment at sc0000100:327364..329269- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009929 ID=TCONS_00009929|Name=TCONS_00009929|organism=Clytia hemisphaerica|type=transcript|length=1906bp|location=Sequence derived from alignment at sc0000100:327364..329269- (Clytia hemisphaerica)
TGATTTTATGTTTTTGAAGAAAGGAATTACTTGTGACACCCCTTTCTCAC
AGACCCGGTAGGATTTTTTCAGCCAGTGGGGAGTAAAAATAACGAACCAA
AACTTGATGGAGATTGATATTTCCATAATCTTTATGACTGGGGATTTGAG
CTCCATTGTTTTCGAATCCAAAAAGTTCAGTGGGGATGGAAAAAATGAAA
AAATAGCACAATATATTTCAGTGAGAATTTGCTTATCAAATTGTTTTCAG
TGGGGGATAAAAATTTGAATATATTTTTCCACTGGGGACGATATTTTTGC
CAATTTTTTCAGTAGGAAGGGGTTCTAGTGAGTCTGTGAGAAGGGGATGT
CTTGTCTTTTGATGCAAATGCGATTTTTTCTACGACTTTCTTTAGATATA
ATATGGTATTGTCCACATTACGTGGTGTTCTTACCAAACGTCCTTTACTG
AGAAGCATCGTGACTGTAACTAGCTTATTCGCGGCTTCAGATCTTTGTTG
TCAACTTTTTGAAAACCATGGTAACATCAAATACAAATTTGACTGGGAAA
GATTACGCAAAATGGCGACCATTGGATTGATATATTACGGACCAATGTAT
TATTACTATTACGGATTTTTGGATCGTAAATTCCCTGGTAAAAATCCTAG
AACTGTCCTTGTCAAAATTTTGTTCGATCAGTTTATTTTTGCTGTACCGT
CACAGTTTTTCTTTTATTGTATAGCTGGTAAACTCGAGAGGAAGAACAAC
TCTGAGATAATCGAGGAAATTAAACTGAAGTATATACCAACCTATGTGAC
TTCTACTATATTCTGGCCTGCTGCACAGCTTGTGAATTTTTCATTAGTGC
CACCTACGCATCGTATTTTGTTTGTGTCCAGTGCGAATTTTGTTTGGTTG
AATATTTTATCTTATATTAAGAACCGTCCAAATTTGCCAGCTGTTTTGGA
AAGAGTTCAGAACTGGACTACGATGGATGTTAAGAAGGAGTTGGTTGTCG
AGCACCTGGAAAGTGAGAATAACAATGATTTAGATCTAGAAGAAGATCCC
GAAAGCGAAAAGAAGAAAACAGAATAGGATTTTTAATTTTTTTTTTTATC
AAACAGCCCTGTTTACTTTTAAGGGAAACCCCGGATGATTCTGCATTTAG
GAACTGGGTATGAGGTACATGCAAGCGTCAAAGTTACCTCATTATTCACT
ATATCTAATTAAATAAAAAATTTGAAGAAAAAAAATCATAAGAAAATCGA
ATACCCTAATCAAAATTTACCAGTGTTCTTGAAAGAGTGCAGAGCTGGAA
ATTGTTGGCCAGTAAGAATTATCTAAATGAAAATATCAGTGAAATATTGG
TGGACCCTATGAAAAAGGAGAAAATAGAATAGAATTTATTTTATATTTGA
AGCCTATTCTAACTAATTCTATTGGATAGCCAACAGGAGAGAATATTTAA
GCAAAAATGTATAAGGTAACCTTTAACAAAATTCGAGCAAACTCTCCATA
ACTTGAACATCGCTAGTCTCAATCATAGACTTCTATATAGATATACACCA
TATATCTATAAGAAATTATTTTTTGCTGAAGGGTGAGCAGAAGCCTAAAA
CATCCCGCCCCTCGTCCCGCCCCTTAGTGTTTGAGATTGGAGACTTAACT
GTGCGCAAAATGTCATTCCAATCAATCGAGGCTCTAGACACCTTTACATC
AAGTTTGTTTGAAAGAGGAAGAATTCGAAAATTTTCAGTAGATGGGTTGA
AATGAAAAAGCATACACGAATTAGGTCGGGTGATTTTGAATTACTCTATT
AAAAAGTTTAAAGGTTGCGCCGTTCAATTTTAATTTAACCCATTATTTTA
TAGAACAATTTTTAAAGAAAATCAAAATGGTGAATTTTATAATTTCATTT
TATCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009929-exon-sc0000100-1575043694:327364..329269 | TCONS_00009929-exon-sc0000100-1575043694:327364..329269 | Clytia hemisphaerica | exon |
| TCONS_00009929-exon-sc0000100-1510915933:327364..329269 | TCONS_00009929-exon-sc0000100-1510915933:327364..329269 | Clytia hemisphaerica | exon |
| TCONS_00009929-exon-sc0000100-1491911889:327364..329269 | TCONS_00009929-exon-sc0000100-1491911889:327364..329269 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100 | supercontig | sc0000100:327364..329269 - |
Blast
The following BLAST results are available for this feature:
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