TCONS_00009823 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009823
Unique NameTCONS_00009823
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length832

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009823 ID=TCONS_00009823|Name=TCONS_00009823|organism=Clytia hemisphaerica|type=transcript|length=832bp
tttcattCACTCAACTTGACTTCGCCACTACCACCAGCTCAACCACAGCA
CACCACAATCTCTGGCTGAAACAACGATCTATCGCCGCTGATAAACTTCG
ATACATCCTAAATCACATACTAATACCTTTTATATCTCTCACAAGAAGAA
CAAACGCTTCTGTATAAAATGGAGGCTAGTCAGAACTATATTCCCCAACA
AGTTACCAATCACAATGAATCTAATAAAGTTGTTCTCGACAACAATTCGG
AGAATGCATTTCCAGAAGATACGTTTACCCAAAATGTTGAACCTGCTAAC
CATGCNCAACAATACGGAGAATGCATCTCCAGAAGATACGTTTACCCAAA
ATGTTGACCCTGCTAACCATGTTGCTTCCTCAAACACTTGTGAAAGcGAC
GGGGAATATGAAGACGATGTTGTCGGTACAATCACGTATGCCACTCCTGT
CATCAATATATTCATATCAGCAATTATATCGATCGGATTAATATCGATCG
GATTGTACACGTTGTTCAATAGTTTCTGTCCAGATCTATTCAATGGTTTT
TGGCAAGAACCTGAACCGACAACTATGGTTACCATCTTAGAATATTGCCA
AGATGCAATTGATTATGTAATCACCATGGTTACAATGCTGACTCAGAACG
TGACTGTTGCTTTCAGCTGGTTCTGGAAGCAACCAGAGCCAACCGCATAC
GaaaaatttacgattttttgggAACAAGTTTTCATATGTATTGCAACGAA
CCTTCAAATGCTGGCAAACCAAATAGCCGCCTAAATGGTGGTTTAAACCA
AGGACAGCACGTATTCTCAACCAACTCATGca
Run BLAST on NCBI

protein sequence of TCONS_00009823-protein

>TCONS_00009823-protein ID=TCONS_00009823-protein|Name=TCONS_00009823-protein|organism=Clytia hemisphaerica|type=polypeptide|length=189bp
MNLIKLFSTTIRRMHFQKIRLPKMLNLLTMXNNTENASPEDTFTQNVDPA
NHVASSNTCESDGEYEDDVVGTITYATPVINIFISAIISIGLISIGLYTL
FNSFCPDLFNGFWQEPEPTTMVTILEYCQDAIDYVITMVTMLTQNVTVAF
SWFWKQPEPTAYEKFTIFWEQVFICIATNLQMLANQIAA
Run BLAST on NCBI

transcript from alignment at sc0000099:501450..514439+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009823 ID=TCONS_00009823|Name=TCONS_00009823|organism=Clytia hemisphaerica|type=transcript|length=12990bp|location=Sequence derived from alignment at sc0000099:501450..514439+ (Clytia hemisphaerica)
tttcattCACTCAACTTGACTTCGCCACTACCACCAGCTCAACCACAGCA
CACCACAATCTCTGGCTGAAACAACGATCTATCGCCGCTGATAAACTTCG
ATACATCCTAAATCACATACTAATACCTTTTATATCTCTCACAAGAAGAA
CAAACGCTTCTGTATAAAATGGAGGTATACCGTTATTACCTTTCGctttt
ttatcttatcttagTTTTTTTTGTCCTTGGTTGGGGATATTCTTAATAAG
ATTTATCAAAAGGTGGATGCACTCCGCTACTTAATTGCTTAACGAAACAG
GCAATTAGAGATAGGGTTGTAAACTTATACGCGTTTTTTCATgagaaaat
tcaaatattttgaagcctttggatgttcgcAACATtaggccatcgaagct
ttatgttcttatatagtttgttcttataaaaaaacgtgttaaCTGCCGAA
CCATCGAGTTTAAAGCACTTAAGAAGCTAGAGATaaaactcttggatggg
aaatgaaacgaCTTATAATAGACCttgggaattctattgtaatacactcg
aaacaatcccacaatgtatcgcttttttagaaaaatcaaaaactccgata
aggggTATTCCCATCTAAACCGTGTGGTTcgtgtggttttcacacaaaca
cgGAATTGAAAGTAAACTATATGGGCAATTTGACAAATATGTCGcgtaaa
aaaaagaaagcacTTAGATCCTATCTACCATTCGGGTTTTAAATTCAATG
CATCTAACCCAGCTCCATCATCTCCAACTTCTTTGTTATGTTGTACGTTT
TAGGCTAGTCAGAACTATATTCCCCAACAAGTTACCAATCACAATGAATC
TAATAAAGTTGTTCTCGACAACAATTCGGAGAATGCATTTCCAGAAGATA
CGTTTACCCAAAATGTTGAACCTGCTAACCATGCNCAACAATACGGAGAA
TGCATCTCCAGAAGATACGTTTACCCAAAATGTTGACCCTGCTAACCATG
TTGCTTCCTCAAACACTTGTGAAAGGTAGGAttatcaagtttttgtttat
gataATGTAGAGTTGCTAAAACTTTCTGCCGAAAAACAATTTCTAGATCA
TCGCGCTAGTCTTTATATTTGACAAAGTAATGATCCTTCAGAATTGGGGG
TTTAACATGAATGAATTTCTTTCAGCAATTTTAAGGATAAATAAGTTTTT
AGATTATTATAATGGCGCTAAATATTTAACATGGAAAAAGAGCAAAGATA
CTAGGCTGGAAAATTAAAGTTAAATCTAACTGAAGACTACTGTTCTAAAT
TaaaggagcgatggccaagtgtgTTTCTCGGCTCGAATACCGCTTCTCTC
AGGTTCTACTCAATTCAAATAAGCTAAGCTTACTGGCTAATAGGCCCCAT
AAATACAATTGAAAGACTCTCTTAAAGTCCTAGATCACTGAGATATCCTC
GTAAAAATACTGACTCGATTCTCTCTATTTCGAATCACtattctctgtaa
ttcgaactaaagcaTCCGTCTACTCAGCTGGAAAGTTGTATACATAAAAG
CAATCtccataattcaaatttttctcttattcgaagaaaattctcggtcc
cttaaagatcgaattagagagagtcaacagTGACTTTTATTGGTAAACCA
TTCATTTTAAGAAAGTTTGTATAGTTCTAAAAAATCtcactttctttttt
cagcGACGGGGAATATGAAGACGATGTTGTCGGTACAATCACGTATGCCA
CTCCTGTCATCAATATATTCATATCAGCAATTATATCGATCGGATTAATA
TCGATCGGATTGTACACGTTGTTCAATAGTTTCTGTCCAGATCTGTAAGT
ATATAGTGGTACATATTTTttgattcttaaaattttcctaGAATGCCACC
TAAGTGCAATTATGACAGTATTTTACAATTGCAGGGTTTATTAAAGATAG
AGAGGGTAACGTGCTTTGGAGAGGGTATTTAATTCTtatcttaaccctat
tcggcctaggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNataaaaaaaaatttgacacctaaaaattttcacaccttgagtat
gatgacatttctgacagtaaggtgtcacaaaaattgacacttttccaata
caaatttattatTAATGTCTAATacatcgtttaaaccgtaatttattgaa
tatttaggataaaataagcattttaaactcagacaacttttttctaaagc
ttttgttagaatacaatagctatttatNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNACCCAAAAagaccaactagatcaaa
agttaaggggtggtacaggaaaagcccccccctagttctgaaccgcccct
aaaagcctaggttgaatagggttaaagaccCTGAAATGAAATCTCAAATT
CATTTTACCAACTTTTACTTGGATCAGCAAGTCAGTACGTTTTAAACTTT
TGTGGGAAGCTGCCACACAGTAGCTTGAACATTAATATTTTTGTCTGCTG
TTTCATgaatcatatttttttatttctgcaATTTCCCGTTAGTAAATCTT
GATCGTTTTTAGTTTGTGAGATGGTATTATTGTTACCAGCCCCCTGAtaa
tcttcttctttctcttctttccTTTGAAATCATAGTTTTCCcaggaataa
aaaaaattcactaatCGACCTGTCGAAAGGCATCATAGTATCTCTTTGTA
CAATAAAGTTCGGATTTATCAATAACCCGACGGGGAATATGAAGACTCGG
ATTTTTTCGGTACAATCACGAAAATATTAATAACAGGTGTTGCATATGTG
ATTCAATCACAATTCCAGTCATTAATATTTTCGTGTCAGTATTTATTTCA
ATCGGGTTGATATCATTCGAATGATATTAACCCGATCGAAATAAATGCTG
ACACGACGCGTTTAATAGTTTCTGTCCAGATCTGTAAGTATATAGTGGTA
CATATTTTTTGATTCTTAACAATTTTCCTAGAATACCTAAGTGCAATTAT
GACAATATTTTACAATTGCATGGTTTATTAAAACTATAGAGGGTAACATG
CTTAGGAGAGGGTATTTAATTCTTATCATAAAGCCCCTGAAATGAAATCT
CAAATTCATTTTACCAACTTTTACTTGGATCAGCAAGTCAGTACGTTTTA
AACTTTTGTGGGAAGCTGCCACACAGTAGCTTGAACATTAATATTTTTGT
CTGCTGCTTCataaatcatatttttttaattctgcAATTTCACGTAAGTA
AATCTTGATCGTTTTTTAGTTTGTGAGATGGTATTATTGTTACCAGCCCC
CTGATAATAATCTTCTTTCCCTCCTTTCCTTTGAAATCATAGTTTTCCCA
GGAATAAAACATTTTCCCTAATCGACCTGTCGAAAGGCATCATGGCATCT
CTTTGTACAATAAAGTTCGGATTTATCAATAACCCCGACGGGGAATATGA
AGACTCGGATGTTGTCGGTACAATCACGAAAATATTAATAACAGGTGTCG
CGTATGTGATTGCATATGTGATTCAATCACATACGCGACTCCAGTCATTA
ATATATTCATGTCAACACTTTCGATCGGGTTGATTTCATTCATCTTATAC
ATGACGTTTAATAGTTTCTGTCCAGATCTGTAAGTTTACAGtggtacata
ttttttttttattcttaacAATTTTCCTATAATGCCACCTAGGTGCAATT
ATGACAATATTTTACAATTGCAGGATTTATTAAAAATATGGAGGGTAACG
TGCTTTGGAGAGGGTACCCTTTTTCATCTCCTCTCCTTTAATATCATATT
TTTCCAAGAATGAAAACTTTTCCCTGATCGACCTGTGGAAAGACATCATG
GCATCTCCTTGTACAATAAAGTTCGGCTTTTTCAATaaccttttaaaatt
ttgaatttactcAAAACTTATGGAACGTAGAaactttcaatatatttttt
tctttactaATGTTGAAAGGAACTCAATTGTTCGAGAACCATGAAATTAC
CACAGGGTGAAGGCTTAGACTTTCTAAAATGGTAAGGTCAAACTTACTTT
AGTAACTAAAAGGAAAGGCTGAAACTTCTTCAAATACAAGAAAGGATTCA
ATTTTGCAACGGCTGAAGAAATATATTTGATTAATCTTTACGTTTTGTTA
TTTGAGGATACTGGGTCCAAAAGTTAAACTACAATAAGCCTCTTGTCACA
CCTCTGATCGCTCATTCCCTAATAAGGCGAGAGTCGCATCTCCTATATTT
AGGCTTTGAAGCCACGTTTTGTCGATTTTGCGTATATTTTTTGCATCTGC
TTTCTTCCTGATCGGCTTGCTGAATGGTGTTGTAGCATCTCTTTGTTCCA
TAAATTTCGTCTTTTTTCAATAacctttttaaaagattttgagaATATTC
GAAGCTTATGAGGCGTAGAAGCTATCAATATGTTGCTCTGAGTGTAATCT
TTCTAAAATCGTTGAATTGATTCCAAACTTTAACGAGCGTAGGAAGCGTT
AAAGCTGTTAATAATTATTACCAGTGTTTACTGATTTTGAAAGGACCTGA
CCCGTTCGAAAACATGAAATTACCACAAGTAAGCTAAAACTTCTTCAAAT
AGCAAGGATTCAATCTTGCAACGGCTAGAGAAATATATTTGATTAATTAT
ATTACGTTTTGCTTGTTGATATTGAGTGTGAAGTCAAATTAGCCTCGTTT
CATAACACTTTCATTCCTAATGATATTCAGGGCGACAGCGCCTCCGATCC
CTTATTCCACCGCCCATTTGCTTTCTTACACACTGCAATTGGCATTGGCA
TAAGCAATAATTTACCCTAGATgtttaagattttgattttttgccaAATG
GTCAATCAAAATAGACATTGAGACTTATATATATTATATCTTATTATTCG
CATATATCTTATTAtctctttattgtttccattttgagtagttgaaggtt
ttatacttctagaaaaaaaccgtgcaccccctgttgaggagtccatttcc
gttccaagggggtatggtgtgaaatgcagtggaattccgtcaaaaataag
tggaattccatgggggtaatgaatgaaaatctgtaaaaattgggaattcc
agaggggtatgatcctaaaattgcctggaattccaaggagGTAGGTCATA
AAATGTTGgagctcctcaacagggggtgtacggttttttctggaaaagcc
cattatctATGTTGCAGAAGGAagttatgatttttaagattatgCTATTA
CGCTGGGAAAATCATCAAGTTTCCTTTGTCCAAAGTGAGATTAATCTTGC
CTGTTTGATGACAGGGATGTAGGATTTTGCTTATGACATGGTAAACTGAT
ACTTTGCTTAGGACATGGTAAACTGATACTTTGCTTAGGATATGGTAAAC
TGATACAAAGTTGCAAAGTTAAAATCATTACTGGATTTATTCAAAACTCA
TTGGACGTAGAAGCTGTCAATGTGTTGCATATTATGTTGCTTTCACTGTT
TCGTGATGTAAATCTCTCAGTCAGCATAGAATTTGGCTTAAACTTTTCTA
AATAGCAAAAATTGAATCTTACAAGACAATTCATCCTAAAATTAGATTAG
AAATCAAAGCTTTGTGATATACATACTGGGAAAATCGTATCGAGGTTTCC
TTGTCCAAAGAAGAATTTTCAACATACCTGTTTGATGGAAGGGACTTGGA
AATTTACTTTGGACATAGCGACCTGAGATTCTATAAATAATTAcgaagtt
tttttaattttacaatCAGACTTAATATGGATCAATTAAGAACAAGCAGA
ACAAAACGTGTTTTATGGCCCTTTTTATCTTACCTACCCGTTGGTGTTAG
GGGAcccccagtggtttgcgtgaatgcgtgaatgggctttttcacttgcg
cgaatgcgtgaattggaaagctttgcgtgaacaaaaaacattgcgtgaat
gagtgaatttggaaaaaatNcagtggtttgcgtgaatgcgtgaatgggct
ttttcacttgcgtgaatgcgtgaattggaaagctttgcgtgaacaaaaaa
cattgcgtgaatgagtgaatttggaaaaaatatttgcgtgattgcgtgaa
atGAAGGtccactgggggggggggctctgtTAGGGACCCACCGATCTTTC
TTTCGCGTGCCTTTTTCAACCAATGATTCAATTCTATCTAATTTTATAAC
CATTTGcaaaataatttagaaaatttttacgTAAATGAAGACGAATGGTG
ATGAAAAATCAAGAAGAGGTTAAACAacttgaattattttttctttggtg
CTCTGGAAACTTCATTTTAGGTGAAGAGCAATTCTAGCTATATAATCATT
TTTTACTAATAATTAATACATTGAGAGTTACAGCTTTTAGGAGGTAGCTT
GTTGGAATCAAGAAGTtctgtttttctgttttttttttcacttcattGAG
CCGTACCATCGTAAAAGAGTAGATCGTTTTAGTATAATCAGGTTTCATTT
TCAACTGTTTCAACGCACGAATCAGCACTTGCGGATATCTCTTGTGGGAT
TTacaaacccagctggcacacaacgttgttttaacgttcatctaacgtta
aatggacgttgtgaacattagatttACGTTGAAAGAACGCTATGTGCCAA
CTGGGAAGGTTATTCAGATTAATACCTGATATTAATCAACTCAGACATTT
AGTAAAACCCTAAAATACTATCTGTACGACTTTACTTTACTGTACGACTC
GTTGCCAGGGGGGCACTGGTATTGGGGCGGTCGAAGTCCGATGATCTTTG
TCAAATATGAATGTTTTGTAAATTTGGCACCCTATTAGAGCGAGCGAAAA
TGGAAGATTTCAGTCTGAGGAATgccaaaaatgactaaaagtagacaGAA
AATTGAGGAATCTTTCTAACTTCCACCcttaaaattgtccaaatggTGTG
ACTCAGGANACAGAAAATTGAGGAATCTTTCTAACTTCCACCctaaaaat
tgtccaaatgctGTGACTcaggatttttgaaattctgaaattgtttatTG
GTTTTTAGTTAAAGGTTTCGAGTATCGAGACTCAGGGCCATCTTGAATTG
AATCATTCAAACTAGGTTGTTTCGAGTGTTGATAATCGAATCCAGTAACA
AGGTGGTACGGATTTGAATGAGAATCTGACTCAGGATGTTTGAAATTCTA
AACTTGAGGTTGCTTTTGCAAAAGGTTTCAAGCAATCAGACTCAAAGCAA
TCCTGGATTGAATCATTCAAACCAGGTTTTTTTTGGTGCTGATCATCGAA
GCCAGTGACAAGTTGTAATATGGATATGTTTGTTTTCCTAGGGATTAAGT
AAAAAGGtaccatgaaaatgaaaatgttattgttctctGAAAGGGATGCA
TAAATTATGCGGTGGGGATGACAAGCTGAAACAACGTATTTTGAGAAGAA
GCTGAGTGCTCAgaatgtttgaaattttgaaattgaagccAGTTTTTAAT
TAAAAGTTTCGAGTAATCACACTCAAAGCCATCCTGAATTGAATCATTCA
AAACAGATGGTTTGGGTGTTGATAATTGAAACTAGTAACCATATGGTACG
GGTCTGAACATGAAGCTTGATCAGAAAGTTTAAAATCCTAAAATTGAAGT
AATGACACGAATGGAAAGATGTTATGGCCCTTGTGTGTCCTTACGTGTAA
TTTTCTGTGACCCTTTTTGAAAGGGATGCATAAATTATGCGGTGGAGATA
ATGACCTGAAACATCGTATTTTGAAAGTGAAGATGACCGAAGATGTTTGG
AATCCTAGAATTAAAGTAGTgagataaattgaaaaattttatggTTGTTT
TATCCATGAACTTTTTGACATCCCTGTTTGAAAGGGCTACATGAATTCTG
CGATGGAAACAATGACCTGACTTTTCCAATGAGTGAATGAATACCTTATc
gataaaaaatcaatttttttgttacaattaaactttgaattgttttattg
gtttttaATTAAAAGTTTCAAGCAATCAGACTCAAAGCAATCCTGAATTA
AATCATTCAAAACAGATGGTTTGGGTGCTGATGATCGAAACTAGTGACCA
TATGGTACGGGTCTGAACATGAAGCTTGATCAGAAAGTTTAAAATCCTAA
AATTGAAGTAATGACACGAATGGAAAGATGTTATGGCCCTTGTGTGTCCT
TACGTGTAATTTTCTGTGACCCTTTTTGAAAGGGATGCATAAATTATGCG
GTGGAGATAATGACCTGAAACATCGTGTTTTGAAAGTGAAGATGACCGAA
GATGTTTGGAATCCTAGAATTAAAGTAGTgagataaattgaaaaatttta
tggTTGTTTTATCCATCGCCTTGAACTTTTTGACATCCCTGTTTGAAAGG
GCTACATGAATTCTGCGATGGAAACAATGACCTGACTTTTCCAATGAGTG
AATGAATACCTTATcgataaaaaatcaatttttttgttacatttaaaCTT
TGAATTGTTTAATTGCTTTTGTTAGAGGTTTCGAGTGATCACACTCAAAG
CAATCCTGAATTGAATCATTCAAACCAGATATTTTTGGGTGCTGATAATC
GAATCTAGTAACCATATGGTACGAGTATGAACATGAAGCTTGATCAGAAA
gcttaaaattctaaaattgaaataatgACACGAATGGAAAGATGTTATGG
CCCTTGTTTGTCCTTACGCGTAATTTTCTGTGGCCCTTTTTGAAAGGGAT
GCATAAATTATGCGGTGGAGATAATGACCTGAAACATCGTATTTTGAAAG
TGTTTAAGCTAACCGAAGATGTTTGGAATCCTAGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATAA
TGACCTGAAACATCGTATTTTGAAAGTGTTTAAGCTAACCGAAGATGTTT
GGAATCCTAAAATTAAAGTAGTgagataaattgaaaaattttatggTTGT
TTTATCCATCGCCTTGAACTTTTTGACATCCTTGTTTAAAAGGGATGCAA
AAATTCTGCGATGGAAATAATGACAGGATATACCCATCCACTAAGTATAA
CCTTATCagttgaaaatcaattttttgttacatttaaaCTTTCAATTGTT
TAATTGGTTTCGAGTAATTAGACTCAAAGCCatcttagattgaatcattc
aATCCAGATATTTTTGGGTGCTGATAATCGAATCTAGTAACCATATGGTA
CGAGTATGAACAAGAAGCAGACACAGggtgtttgaaattttaagattaaa
GTAGTGACAAGAATGGGAATATGTTATAGTTCTTATATCCCCTCGTGTGA
TTTCATGTGGACCCTGTTTGAAAAGGGTGCATGAATTATGCGGAGAAAAT
GATTACCTGAGACGTCTTATTTTGTTAGGATCTGAACAAAAAGCTAACCT
AGAATGTTTGAAGATTGAAATAGTGACACTAATGGGAACATGTTGCGGTT
CTTATATCCTCTCGTGTAATTTCATGTAGCCCTGTTTGTTGATTTTTCGA
TAGGTCAATTCTAAATGCAATTTTCGGTTTTGGCAAAAGCAACATAAGTC
ATGCTTGGGTTCTTTGAAGGCTCTTTTCAGATTCTTATTGAACATTTTTG
TTGATAGGACTCGTTTACCAGCACTAGAGACATCGTAAATCGATTCATTC
GAATTGAGATGATTTTGAAGCTGGTAATCGAGTCCAGAACATGTTTGCAA
AGAAGTTGCTCCCCTCCTGATAATACATATGTTTAGGGATTTTAAAGACA
ATGATTCAAAATCGATTATGGTCCTTTTCTACGGATCTACACTAAATTTg
ttaatttatttatatttgtaAGATTGTACTGTGCGTCGATTTGTCAGTTT
TggctttttgattttgtaatcatttttgatgatttttagtTCTTTCGCCG
TGATAATTTGTCGATTTGCCACTTTTGTCCTTGTCTCGCTGAGTTGgtga
tatgatttcttttttcgTGGTTTGAAGGCTTTTACTTTTGGCTCAGCATg
cgttttttctcattttaaatagtttttttaGATATAGTATACTGGTTGTT
TCACCAGTTTTGTCAGGAAGTAGAGGATTTTATGATGGTTGTAGCACCCT
GCTCAATCGGTTAAAATACTTTTACAGAATTGGTTGTTATGTTAAAAAGT
TAGAATACGTTTTAatattacatccctgtctcacagccccggtggaactt
ctttTCACAGTGGGGTTGAAAATCTTTATCCACATCGCAACAggaataaa
aattctattgttacaAGAACAAAAACTTCAATGGCAACTTCTGCTGGGGA
AAAAACTTAAGCCAGATTTAGCAGTGAGGTAGGgggttccaccgggtctg
tggcACAGAGATGTAATATTTAATGCATTTAGGAAATATCCGACGGTTTC
ATTGTCAAGAGAACGACATTTAAATCCTCTTTTTAACAGGGATGTAGAGG
GATCAACAGCTGAGAAAAAGGTGATCAGGAAGTCTATATTGTTTACTAAA
CCTCCATGTCACAAACCCTTTAAGACCCCCACTTCACTGGAAAGTTTATC
CTAAGTCTGGTCCCTGTTAGGAAAAATATTCGACAGTCAAAGTCTGTTGA
GGAATATTAGGTAATGGTTTTGAAGTCTCTAAGAATATAAATCCCTCTCC
AATTGTTGCACAGCTTCAAACTCTGAATCACGACTTCTTCTCTTTATtgt
gattttttaaagaaatttgaattgaTTTATCATTCTTTTTTCCAGATTCA
ATGGTTTTTGGCAAGAACCTGAACCGACAACTATGGTTACCATCTTAGAA
TATTGCCAAGATGCAATTGATTATGTAATCACCATGGTTACAATGCTGAC
TCAGAACGTGACTGTTGCTTTCAGCTGGTTCTGGAAGCAACCAGAGCCAA
CCGCATACGaaaaatttacgattttttgggAACAAGTTTTCATATGTATT
GCAACGAACCTTCAAATGCTGGCAAACCAAATAGCCGCCTAAATGGTGGT
TTAAACCAAGGACAGCACGTATTCTCAACCAACTCATGca

Coding sequence (CDS) from alignment at sc0000099:501450..514439+

>TCONS_00009823 ID=TCONS_00009823|Name=TCONS_00009823|organism=Clytia hemisphaerica|type=CDS|length=1710bp|location=Sequence derived from alignment at sc0000099:501450..514439+ (Clytia hemisphaerica)
ATGAATCTAATAAAGTTGTTCTCGACAACAATTCGGAGAATGCATTTCCA
GAAGATACGTTTACCCAAAATGTTGAACCTGCTAACCATGCNCAACAATA
CGGAGAATGCATCTCCAGAAGATACGTTTACCCAAAATGTTGACCCTGCT
AACCATGTTGCTTCCTCAAACACTTGTGAAAGcGACGGGGAATATGAAGA
CGATGTTGTCGGTACAATCACGTATGCCACTCCTGTCATCAATATATTCA
TATCAGCAATTATATCGATCGGATTAATATCGATCGGATTGTACACGTTG
TTCAATAGTTTCTGTCCAGATCTATTCAATGGTTTTTGGCAAGAACCTGA
ACCGACAACTATGGTTACCATCTTAGAATATTGCCAAGATGCAATTGATT
ATGTAATCACCATGGTTACAATGCTGACTCAGAACGTGACTGTTGCTTTC
AGCTGGTTCTGGAAGCAACCAGAGCCAACCGCATACGaaaaatttacgat
tttttgggAACAAGTTTTCATATGTATTGCAACGAACCTTCAAATGCTGG
CAAACCAAATAGCCGCCTAAATGAATCTAATAAAGTTGTTCTCGACAACA
ATTCGGAGAATGCATTTCCAGAAGATACGTTTACCCAAAATGTTGAACCT
GCTAACCATGCNCAACAATACGGAGAATGCATCTCCAGAAGATACGTTTA
CCCAAAATGTTGACCCTGCTAACCATGTTGCTTCCTCAAACACTTGTGAA
AGcGACGGGGAATATGAAGACGATGTTGTCGGTACAATCACGTATGCCAC
TCCTGTCATCAATATATTCATATCAGCAATTATATCGATCGGATTAATAT
CGATCGGATTGTACACGTTGTTCAATAGTTTCTGTCCAGATCTATTCAAT
GGTTTTTGGCAAGAACCTGAACCGACAACTATGGTTACCATCTTAGAATA
TTGCCAAGATGCAATTGATTATGTAATCACCATGGTTACAATGCTGACTC
AGAACGTGACTGTTGCTTTCAGCTGGTTCTGGAAGCAACCAGAGCCAACC
GCATACGaaaaatttacgattttttgggAACAAGTTTTCATATGTATTGC
AACGAACCTTCAAATGCTGGCAAACCAAATAGCCGCCTAAATGAATCTAA
TAAAGTTGTTCTCGACAACAATTCGGAGAATGCATTTCCAGAAGATACGT
TTACCCAAAATGTTGAACCTGCTAACCATGCNCAACAATACGGAGAATGC
ATCTCCAGAAGATACGTTTACCCAAAATGTTGACCCTGCTAACCATGTTG
CTTCCTCAAACACTTGTGAAAGcGACGGGGAATATGAAGACGATGTTGTC
GGTACAATCACGTATGCCACTCCTGTCATCAATATATTCATATCAGCAAT
TATATCGATCGGATTAATATCGATCGGATTGTACACGTTGTTCAATAGTT
TCTGTCCAGATCTATTCAATGGTTTTTGGCAAGAACCTGAACCGACAACT
ATGGTTACCATCTTAGAATATTGCCAAGATGCAATTGATTATGTAATCAC
CATGGTTACAATGCTGACTCAGAACGTGACTGTTGCTTTCAGCTGGTTCT
GGAAGCAACCAGAGCCAACCGCATACGaaaaatttacgattttttgggAA
CAAGTTTTCATATGTATTGCAACGAACCTTCAAATGCTGGCAAACCAAAT
AGCCGCCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005493XLOC_005493Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009823-proteinTCONS_00009823-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009823-exon-sc0000099-1491911889:501450..501623TCONS_00009823-exon-sc0000099-1491911889:501450..501623Clytia hemisphaericaexon
TCONS_00009823-exon-sc0000099-1510915933:501450..501623TCONS_00009823-exon-sc0000099-1510915933:501450..501623Clytia hemisphaericaexon
TCONS_00009823-exon-sc0000099-1575043694:501450..501623TCONS_00009823-exon-sc0000099-1575043694:501450..501623Clytia hemisphaericaexon
TCONS_00009823-exon-sc0000099-1491911889:502253..502474TCONS_00009823-exon-sc0000099-1491911889:502253..502474Clytia hemisphaericaexon
TCONS_00009823-exon-sc0000099-1510915933:502253..502474TCONS_00009823-exon-sc0000099-1510915933:502253..502474Clytia hemisphaericaexon
TCONS_00009823-exon-sc0000099-1575043694:502253..502474TCONS_00009823-exon-sc0000099-1575043694:502253..502474Clytia hemisphaericaexon
TCONS_00009823-exon-sc0000099-1491911889:503153..503293TCONS_00009823-exon-sc0000099-1491911889:503153..503293Clytia hemisphaericaexon
TCONS_00009823-exon-sc0000099-1510915933:503153..503293TCONS_00009823-exon-sc0000099-1510915933:503153..503293Clytia hemisphaericaexon
TCONS_00009823-exon-sc0000099-1575043694:503153..503293TCONS_00009823-exon-sc0000099-1575043694:503153..503293Clytia hemisphaericaexon
TCONS_00009823-exon-sc0000099-1491911889:514145..514439TCONS_00009823-exon-sc0000099-1491911889:514145..514439Clytia hemisphaericaexon
TCONS_00009823-exon-sc0000099-1510915933:514145..514439TCONS_00009823-exon-sc0000099-1510915933:514145..514439Clytia hemisphaericaexon
TCONS_00009823-exon-sc0000099-1575043694:514145..514439TCONS_00009823-exon-sc0000099-1575043694:514145..514439Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000099supercontigsc0000099:501450..514439 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.410555	0.276067	0.337272	0.321183	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.0803326	0	0.0696057	0.607541	0.282867	0	0.0848207	0.146662
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009823 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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