TCONS_00009821 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009821
Unique NameTCONS_00009821
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1482

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009821 ID=TCONS_00009821|Name=TCONS_00009821|organism=Clytia hemisphaerica|type=transcript|length=1482bp
TCAGACAATACATTGAACTGGAATTTTTGGCAAGAGAAATGGTTGGAAAG
ATTATTGCAATATTAAGTTTCTTCTGGACAGCATTGGTAGTCTGCTGCAC
TGTTTCAAGCAAAGGAATCGAGATCTCAGTGATCACACCGTTTGAAGGAC
CGTTTTACGAGGTTGGGCAAGAAGTTATGATTATTTGGACAATCGAAAAG
AATGggaaatcatttttttatcGAAATGCCGTTAATTTCTCTATCAAAAA
AGATGGTATCACAACAGATTTGGATATGTTTTCGTTCCCGTTTGACCCAA
GCATACAAAACGCAGATAATGTTTACATATGGTTTGGTCCTTCAACAATT
AATGTGTTGATACCAAACCTTCGGTACAACGATACATACGAATTTATTTG
CCAGACAGTTCTCACACTGGAGaacaaagaaataaagaaatccGTGGTCT
CCCTTGCAAAAATTTACGGTGGTGTTAAAAACTGTGGCATCATGCAATTT
GAAGATAGATACATCTTTACAGAAAGTTCATCTCCAACAATATGGGTGAC
TTTGTGTGGAAATCCACAACCTGATTTGAAATACACGTGGAACGGCGAAA
CAAGGCTCGCATCTTTAGGCGAAACAATCGATTCAGAAACGAAGATGTAC
AAATATGCAATGGAGCTGGAAAACATCAGTAGAATGCATTGTGGTACACA
AATCAAATTCGTTGCCACTGGATATGAAAGATTGGAAAAGACAGCTAAAG
TTTATGTATTGTATAAACCTGATGCAGGCGATTTTGAAGTTGTTAAAGAA
ACAAATCGTCATGGCGACGGAAAGAACTGCACCGTTTACAACTTCCCTAA
CTTTAACACAGGATGTCGAGAGCGTTACAATATCTATTTTTTTGATAAGT
GGGAAAGAGTTTTGAAAGTGTCGGTGAATTTATCAATCGGTTTTTATGAA
TATGAAGACTGCAATCACCATACATCTAGATACTCCTTCGACGACGTCGC
GTTTACAAGAGTTCAAGTCATCAGATGGGACGGCCTAACGGGAGAAATGT
CAGACTTAAAAAGAATCGATGAGAAAAAAATAGttttagagaACGGACAA
AGTGTTGTTAGTCGAAAAAGCATCATCTTACTTGCAATCGTCTGTTTTGT
CAGTGTTGTGGCGATCGTTGTCGTTGTGCTCAGCTGTCGGTGGACACATT
GTTCAAAAAATATCGAAGAAAATCATGCCAAGAAACTGAAGGAAAGTCAA
ATGAATGAAGAAGACACAGAAGAAGAACgagaagatgaaaagaaaactga
TTCCAAAGAAGTCTTCTTCTATCAAACAAAACCGACAGCCGTCAAAATAG
ACGATTTATTGTGAAAGcgaattttcaaaatgtggAAGATATCTCTGTAG
AaggatatttcaaaaatttacaatttgtaaAACGATTTTTAACTTCATCA
TAAGTGATCCTAATTTCTTCAACCTATGAAAA
Run BLAST on NCBI

protein sequence of TCONS_00009821-protein

>TCONS_00009821-protein ID=TCONS_00009821-protein|Name=TCONS_00009821-protein|organism=Clytia hemisphaerica|type=polypeptide|length=453bp
RQYIELEFLAREMVGKIIAILSFFWTALVVCCTVSSKGIEISVITPFEGP
FYEVGQEVMIIWTIEKNGKSFFYRNAVNFSIKKDGITTDLDMFSFPFDPS
IQNADNVYIWFGPSTINVLIPNLRYNDTYEFICQTVLTLENKEIKKSVVS
LAKIYGGVKNCGIMQFEDRYIFTESSSPTIWVTLCGNPQPDLKYTWNGET
RLASLGETIDSETKMYKYAMELENISRMHCGTQIKFVATGYERLEKTAKV
YVLYKPDAGDFEVVKETNRHGDGKNCTVYNFPNFNTGCRERYNIYFFDKW
ERVLKVSVNLSIGFYEYEDCNHHTSRYSFDDVAFTRVQVIRWDGLTGEMS
DLKRIDEKKIVLENGQSVVSRKSIILLAIVCFVSVVAIVVVVLSCRWTHC
SKNIEENHAKKLKESQMNEEDTEEEREDEKKTDSKEVFFYQTKPTAVKID
DLL
Run BLAST on NCBI

transcript from alignment at sc0000099:441431..448423+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009821 ID=TCONS_00009821|Name=TCONS_00009821|organism=Clytia hemisphaerica|type=transcript|length=6993bp|location=Sequence derived from alignment at sc0000099:441431..448423+ (Clytia hemisphaerica)
TCAGACAATACATTGAACTGGAATTTTTGGCAAGAGAAATGGTTGGAAAG
ATTATTGCAATATTAAGTTTCTTCTGGACAGCATTGGTAGTCTGCTGCAC
TGTTTCAAGCAAAGGTTAGTTAAATACAGCAGACTCTCTctgattcgatt
ttcaaggggctaacaattttatatgaattaaatattcgaattacaaaaag
tAATTTAACCTACTGTCCAGCAAAGTAGGTTCAACATttcagttcgaatt
acagaaagattcgaataatgtaggttcgaattagagagagttgactgtaa
ttAGGTTTATTATACCAATAGTGATGATGACGATTAACAGAAAATGTCCT
AGGCTAGTGAACACACGAAATGTGATTGATCGAAACACACTAGCCTGTCC
GCTCGTGTAGTGTAGTGAAAACTTGTTGAACGGAGGTTATACATCACGTC
TGACACTCTGGCTACGTTGTTTACTGTttattgtataattttttataata
aacTTAGGGGGGAAGGAGCCTTGTAATATGATTCTAGCGAACTCAGATCG
AGGCTTCTCTCAGGGTTTCTAATGCTTTGATGGATGGgagtttttaaatg
aaaatttttttgtgtcCTGGGACGGCAGGGGAGATCAGGCTACGGTATCT
ACTGACTTCCCCTTCCTTCTCTATCCCCTTCTTATTTTCCTTTCGATTTT
TCTCTGTATGTTTGAAAGTATAATTCGTATCTATAATCCATCCATAGGAA
TCGAGATCTCAGTGATCACACCGTTTGAAGGACCGTTTTACGAGGTTGGG
CAAGAAGTTATGATTATTTGGACAATCGAAAAGAATGggaaatcattttt
ttatcGAAATGCCGTTAATTTCTCTATCAAAAAAGATGGTATCACAACAG
ATTTGGATATGTTTTCGTTCCCGTTTGACCCAAGCATACAAAACGCAGAT
AATGTTTACATATGGTTTGGTCCTTCAACAATTAATGTGTTGATACCAAA
CCTTCGGTACAACGATACATACGAATTTATTTGCCAGACAGTTCTCACAC
TGGAGaacaaagaaataaagaaatccGTGGTCTCCCTTGCAAAAATTTAC
GGTAATTCCAGGTTTATttacaagaacaattttataagagcacgaactta
attttgttgaaacttaagaaaaaattgagaataatcTTCAGCCTCAGATT
TCAAGAAAGAGGATTATTTTGATCCATTGTGATCTCATCTAGAAAAATTG
GCCCCGATTCGTCTCTGGTCGGAAAGATACCCTAACATATAAATCCAATT
GGATGAGGACACACGCTCATCTTCAATAGTGGAAATTAATCGGTAAAAAT
AGAGTTTAAACTCCCCACCaaataaaataagaatttcCGATCCCCATTGG
TATTTGGTTAAGACAGGGTTGTATCCTGACATGTGAAAGTCATCTTCTCT
ATGCAGTTGATGTCTTTtaaactcgaacctctataactcgaataagTTAA
CTCGTTCCTTCAGTCCAGTTAACAATGTCATATAAACATTACTCTgtaac
tcgaaatttctttaactcgaacaaatttgtgctcCCTGGAGACTGCACTG
TATTCAGTTTTAAGACAGATGTGTAACCAAGATTGTTAAGCCAACTCATT
ATCTCTACAATGACACAGGTGGTGTTAAAAACTGTGGCATCATGCAATTT
GAAGATAGATACATCTTTACAGAAAGTTCATCTCCAACAATATGGGTGAC
TTTGTGTGGAAATCCACAACCTGATTTGAAATACACGTGGAACGGCGAAA
CAAGGTAAATATTGAATTtagcggtttctttgttttcgagtggtatattt
tttgaaatccagcgaaaaattttactttcaatccggaaTTTGTACAAAAA
CCCCACCGGCCAATCAAGGCCGTTCAATTTAGATAGACTTTAGAgccttc
aaatcctaccaaggagattcgtttctagcccttcgggcttatatttCATT
GGGGTTGACCCTCTACTAACAATCACCAGTTAATTCTCTTCAAACAGGCT
CGCATCTTTAGGCGAAACAATCGATTCAGAAACGAAGATGTACAAATATG
CAATGGAGCTGGAAAACATCAGTAGAATGCATTGTGGTACACAAATCAAA
TTCGTTGCCACTGGATATGAAAGATTGGAAAAGACAGCTAAAGTTTATGT
ATTGTGTAAGTTTTTGTTGCTACTTTTCGAGAAAACAGCTAAGATGGATG
TGACCTTCTTTCTTATTAGTCGaaggaaaaataaagattttcatttattc
CGCTCAGATACGTAACGGTTGACGAAGGTTGACATAAAGTCAATATTCAT
CTCTTCCCCAAGCAAAATTAATGAACAATATCGAAAACAATTAAAgacaa
aaatgagaacaatGCATGTGTATGGGGACCACCCCTTAGCAAGATTGTAC
CTTTAGAATTAACCTCAATAAGAAAGCgcacaaatttaaaaattcagcTT
GGCCAACCCAAACCAAACccaaaaagttgagaatatacgaaggcttcaaa
aattttggatgttcttataaaaagaacgtgTAAAGCGAAGTTCGCTGAAG
TTTGAATATGTTTTTCATTTAGATAAACCTGATGCAGGCGATTTTGAAGT
TGTTAAAGAAACAAATCGTCATGGCGACGGAAAGAACTGCACCGTTTACA
ACTTCCCTAACTTTAACACAGGATGTCGAGAGCGTTACAATATCTATTTT
TTTGATAAGTGGGAAAGAGTTTTGAAAGTGTCGGTGAATTTATCAATCGG
TTTTTATGAATATGAAGACTGCAATCACCATACATCTAGGTATGTCGAAT
TTTGAAGAGCTTTTTGTGTATTTGTTAATTTCAGTAGAAACCTTTAGAGG
CAGAGAAATACTAAATGTTAGATCTTTTTGAATGTCAACAAAGCCAATCT
GGTTGTGTTGccagttttttatcaattctGTTTTGCTTCTTTATACCCCG
GGGTGTTTGGGCAAAATAAGGTACGGGATgtaccgctggtcagggtacct
ttttcacctccatgagtcccaggtagggtcgcaaaaaaacactgaaatag
aaaaatcagtccctcgtggGGTACCGTTTTGAGGAAATTTGATgggaaaa
aattgagaaacttttggcatttcagtcccattcagtcctattcattaaaa
aaaacgagtcccGCGTAGGGTTTATTTTTTGAACTTCAGCGGCACACCCC
CATCGGACGGCAAGGATAGCACACCCCGGGTTTTATAATACTAATTCTTC
ATATTCTTTCAATTTATCAACCACTCCCACAATGTTTAAACTTAAAAGCA
AAGTaaataccgttgaaaagataacatTTCAGAGCATCATAACATGCGCT
TAAAAATGACAGACAATGACCCCCCGGGGGGGGAGGTACTTGGGCAAAAT
GAGTGTGTCTCTCTAACGGTggacaaaatttttgataatttgccTCGGAC
ATAACCGTCATTTCGCAAATCTAGTACCCTCCTGGGAAACGGAAAAATgt
agaataatagtttttataCTCTTTTGTGCTGGAAAGTTTTATGCTGTGAA
GGGGTTAAGTCTTATTTTGTTTCACGTTGCTTGATTTAGATACTCCTTCG
ACGACGTCGCGTTTACAAGAGTTCAAGTCATCAGATGGGACGGCCTAACG
GGAGAAATGTCAGACTTAAAAAGAATCGATGAGAAAAAAATAGGTAAGAA
AATGCTTTGAAGTTTATTAGAGTGATACTTTATTAAGTATTACAAGAAca
tactatataagaacaaaaggcttcgatggccaaaatattgagaacaagtt
aaggacatgggatttcaaggcttttgtggcctctaaaacacccgatttct
tagggaaaTTGGCAAAAACACTCATAAAATAGTGAAgttaagaacacgtt
aagaacatttttaggcttgaaactctaaaatttaagaacatccgaaagcg
tCAAAAAttatggatgttcttataaaaaagtgtactaAAATTCTTCTCAG
ATATTCATAGCATGTctttaaatgtacatacttaCCTATACAGTTTCAAT
AACAGAGGCCACACAAATTTCGGTTTGAGCCCTAACTAATTattgaataa
tttgaatttattaAATTTAACCATCTTTTAGGATACCTTAGGGAAATATC
AAAAGTGTTAGAATTCTACCCTGTGCTTAACCCTCCCATACGATAAATGA
TGGcgtaaattttacttttttttagttttagagaACGGACAAAGTGTTGT
TAGTCGAAAAAGCATCATCTTACTTGCAATCGTCTGTTTTGTCAGTGTTG
TGGCGATCGTTGTCGTTGTGCTCAGCTGTCGGTGGACACATTGTTCAAAA
AATATCGAAGGTTAGTCAATTTACAAAAGCAGCCCTTCGTAAAAGCGAAT
CTTtgacctttctcaggcaagaaaaagtgaagccttaggAATACACGCAC
TTTTTTGACGACGTGAAATATTTACTTTCAATCTAGAATTGGTATAAAAA
CTAAGTGGACCGCTCAAGGCCTTAGGTATGATTTAGTGGCTTCAAATTCT
ACGTAGGAGATTCacttctagcctttcgggcttttaCTTCCTTGTACAGC
ACCCCAAATGTATACAGCGTTTCATTGTTTCCACTTTTTATGCAGAAAAT
CATGCCAAGAAACTGAAGGAAAGTCAAATGAATGAAGAAGACACAGAAGA
AGAACgagaagatgaaaagaaaactgaTTCCAAAGAAGTCTTCTTCTATC
AAACAAAACCGACAGCCGTCAAAATAGACGATTTATTGTGAAAGcgaatt
ttcaaaatgtggAAGATATCTCTGTAGAaggatatttcaaaaatttacaa
tttgtaaAACGATTTTTAACTTCATCATAAGTGATCCTAATTTCTTCAAC
CTATGAAAAGGGACCtgttcccggggggggggggNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCGTAGGGTTTATTTTTTGAACTTCAGCGGCACACCCCCATCGGACGG
CAAGGATAGCACACCCCGGGTTTTATAATACTAATTCTTCATATTCTTTC
AATTTATCAACCACTCCCACAATGTTTAAACTTAAAAGCAAAGTaaatac
cgttgaaaagataacatTTCAGAGCATCATAACATGCGCTTAAAAATGAC
AGACAATGACCCCCCGGGGGGGGAGGTACTTGGGCAAAATGAGTGTGTCT
CTCTAACGGTggacaaaatttttgataatttgccTCGGACATAACCGTCA
TTTCGCAAATCTAGTACCCTCCTGGGAAAcggaaaaatgaagaataatag
tttttataCTCTTTTGTGCTGGAAAGTTTTATGCTGTGAAGGGGTTAAGT
CTTATTTTGTTTCATGTTGCTTGATTTAGATACTCCTTCGACGACGTCGC
GTTTACAAGAGTTCAAGTCATCAGATGGGATGGTCTAACGGGAGAAATGT
CAGACTTTAAAAGAGTCAAAGAGAAAATAATAGGTAGGAAAATGCTTTGA
AGTCTGTTAGAGTGATACTTTATTAAGTattacaagaacaaactatataa
gaacaaaaggcttcgatggccaaaatattgagaacaagttaaggacattt
caaggctttgtggcctctaaaacacccgatttcttagggaaaTTGGCAAA
AACACTCATAAGATAGTGAAgttaagaacacgttaagaacatttttaggc
ttgaaactctaaaatttaagaacatccgaaagcgtCAAAAAttatggatg
ttcttataaaaaagtgtactaAAATTCTTCTCAGATATTCATAGCATGTc
tttaaatgtacatacttaCCTATACAGTTTCAATAACAGAGGCCACACAA
ATTTCGGTTTGAGCCCTAACTAATTattgaataatttgaatttattaAAT
TTAACCATCTTTTAGGATACCTTAGGGAAATATCAAAAGTGTTAGAATTC
TACCCTGTGCTTAACCCTCCTATACGATAAATGATGGcgtaaattttact
tttttttagttttagagaACGGACAAAGTGTTGTTAGTCGAAAAAGCATC
ATCTTACTTGCAATCGTCTGTTTTGTCAGTGTTGTGGCGATCGTTGTCGT
TGTGCTCAGCTGTCGGTGGACACATTGTTCAAAAAATATCGAAGGTTAGT
CAATTTACAAAAGCAGCCCTTCGTAAAAGCGAATCTTtgacctttctcag
gcaagaaaaagtgaagccttaggAATACACGCACTTTTTTGACGACGTGA
AATATTTACTTTCAATCTAGAATTGGTATAAAAACTAAGTGGACCGCTCA
AGGCCTTAGGTATGATTTAGTGGCTTCAAATTCTACGTAGGAGATTCact
tctagcctttcgggcttttaCTTCCTTGTACAGCACCCCAAATGTATACA
GCGTTTCATTGTTTCCACTTTTTATGCAGAAAATCATGCCAAGAAACTGA
AGGAAAGTCAAATGAATGAAGAAGACACAGAAGAAGAACgagaagatgaa
aagaaaactgaTTCCAAAGAAGTCTTCTTCTATCAAACAAAACCGACAGC
CGTCAAAATAGACGATTTATTGTGAAAGcgaattttcaaaatgtggAAGA
TATCTCTGTAGAaggatatttcaaaaatttacaatttgtaaAACGATTTT
TAACTTCATCATAAGTGATCCTAATTTCTTCAACCTATGAAAA

Coding sequence (CDS) from alignment at sc0000099:441431..448423+

>TCONS_00009821 ID=TCONS_00009821|Name=TCONS_00009821|organism=Clytia hemisphaerica|type=CDS|length=10896bp|location=Sequence derived from alignment at sc0000099:441431..448423+ (Clytia hemisphaerica)
AGACAATACATTGAACTGGAATTTTTGGCAAGAGAAATGGTTGGAAAGAT
TATTGCAATATTAAGTTTCTTCTGGACAGCATTGGTAGTCTGCTGCACTG
TTTCAAGCAAAGGAATCGAGATCTCAGTGATCACACCGTTTGAAGGACCG
TTTTACGAGGTTGGGCAAGAAGTTATGATTATTTGGACAATCGAAAAGAA
TGggaaatcatttttttatcGAAATGCCGTTAATTTCTCTATCAAAAAAG
ATGGTATCACAACAGATTTGGATATGTTTTCGTTCCCGTTTGACCCAAGC
ATACAAAACGCAGATAATGTTTACATATGGTTTGGTCCTTCAACAATTAA
TGTGTTGATACCAAACCTTCGGTACAACGATACATACGAATTTATTTGCC
AGACAGTTCTCACACTGGAGaacaaagaaataaagaaatccGTGGTCTCC
CTTGCAAAAATTTACGGTGGTGTTAAAAACTGTGGCATCATGCAATTTGA
AGATAGATACATCTTTACAGAAAGTTCATCTCCAACAATATGGGTGACTT
TGTGTGGAAATCCACAACCTGATTTGAAATACACGTGGAACGGCGAAACA
AGGCTCGCATCTTTAGGCGAAACAATCGATTCAGAAACGAAGATGTACAA
ATATGCAATGGAGCTGGAAAACATCAGTAGAATGCATTGTGGTACACAAA
TCAAATTCGTTGCCACTGGATATGAAAGATTGGAAAAGACAGCTAAAGTT
TATGTATTGTATAAACCTGATGCAGGCGATTTTGAAGTTGTTAAAGAAAC
AAATCGTCATGGCGACGGAAAGAACTGCACCGTTTACAACTTCCCTAACT
TTAACACAGGATGTCGAGAGCGTTACAATATCTATTTTTTTGATAAGTGG
GAAAGAGTTTTGAAAGTGTCGGTGAATTTATCAATCGGTTTTTATGAATA
TGAAGACTGCAATCACCATACATCTAGATACTCCTTCGACGACGTCGCGT
TTACAAGAGTTCAAGTCATCAGATGGGACGGCCTAACGGGAGAAATGTCA
GACTTAAAAAGAATCGATGAGAAAAAAATAGttttagagaACGGACAAAG
TGTTGTTAGTCGAAAAAGCATCATCTTACTTGCAATCGTCTGTTTTGTCA
GTGTTGTGGCGATCGTTGTCGTTGTGCTCAGCTGTCGGTGGACACATTGT
TCAAAAAATATCGAAGAAAATCATGCCAAGAAACTGAAGGAAAGTCAAAT
GAATGAAGAAGACACAGAAGAAGAACgagaagatgaaaagaaaactgaTT
CCAAAGAAGTCTTCTTCTATCAAACAAAACCGACAGCCGTCAAAATAGAC
GATTTATTGTGAAGACAATACATTGAACTGGAATTTTTGGCAAGAGAAAT
GGTTGGAAAGATTATTGCAATATTAAGTTTCTTCTGGACAGCATTGGTAG
TCTGCTGCACTGTTTCAAGCAAAGGAATCGAGATCTCAGTGATCACACCG
TTTGAAGGACCGTTTTACGAGGTTGGGCAAGAAGTTATGATTATTTGGAC
AATCGAAAAGAATGggaaatcatttttttatcGAAATGCCGTTAATTTCT
CTATCAAAAAAGATGGTATCACAACAGATTTGGATATGTTTTCGTTCCCG
TTTGACCCAAGCATACAAAACGCAGATAATGTTTACATATGGTTTGGTCC
TTCAACAATTAATGTGTTGATACCAAACCTTCGGTACAACGATACATACG
AATTTATTTGCCAGACAGTTCTCACACTGGAGaacaaagaaataaagaaa
tccGTGGTCTCCCTTGCAAAAATTTACGGTGGTGTTAAAAACTGTGGCAT
CATGCAATTTGAAGATAGATACATCTTTACAGAAAGTTCATCTCCAACAA
TATGGGTGACTTTGTGTGGAAATCCACAACCTGATTTGAAATACACGTGG
AACGGCGAAACAAGGCTCGCATCTTTAGGCGAAACAATCGATTCAGAAAC
GAAGATGTACAAATATGCAATGGAGCTGGAAAACATCAGTAGAATGCATT
GTGGTACACAAATCAAATTCGTTGCCACTGGATATGAAAGATTGGAAAAG
ACAGCTAAAGTTTATGTATTGTATAAACCTGATGCAGGCGATTTTGAAGT
TGTTAAAGAAACAAATCGTCATGGCGACGGAAAGAACTGCACCGTTTACA
ACTTCCCTAACTTTAACACAGGATGTCGAGAGCGTTACAATATCTATTTT
TTTGATAAGTGGGAAAGAGTTTTGAAAGTGTCGGTGAATTTATCAATCGG
TTTTTATGAATATGAAGACTGCAATCACCATACATCTAGATACTCCTTCG
ACGACGTCGCGTTTACAAGAGTTCAAGTCATCAGATGGGACGGCCTAACG
GGAGAAATGTCAGACTTAAAAAGAATCGATGAGAAAAAAATAGttttaga
gaACGGACAAAGTGTTGTTAGTCGAAAAAGCATCATCTTACTTGCAATCG
TCTGTTTTGTCAGTGTTGTGGCGATCGTTGTCGTTGTGCTCAGCTGTCGG
TGGACACATTGTTCAAAAAATATCGAAGAAAATCATGCCAAGAAACTGAA
GGAAAGTCAAATGAATGAAGAAGACACAGAAGAAGAACgagaagatgaaa
agaaaactgaTTCCAAAGAAGTCTTCTTCTATCAAACAAAACCGACAGCC
GTCAAAATAGACGATTTATTGTGAAGACAATACATTGAACTGGAATTTTT
GGCAAGAGAAATGGTTGGAAAGATTATTGCAATATTAAGTTTCTTCTGGA
CAGCATTGGTAGTCTGCTGCACTGTTTCAAGCAAAGGAATCGAGATCTCA
GTGATCACACCGTTTGAAGGACCGTTTTACGAGGTTGGGCAAGAAGTTAT
GATTATTTGGACAATCGAAAAGAATGggaaatcatttttttatcGAAATG
CCGTTAATTTCTCTATCAAAAAAGATGGTATCACAACAGATTTGGATATG
TTTTCGTTCCCGTTTGACCCAAGCATACAAAACGCAGATAATGTTTACAT
ATGGTTTGGTCCTTCAACAATTAATGTGTTGATACCAAACCTTCGGTACA
ACGATACATACGAATTTATTTGCCAGACAGTTCTCACACTGGAGaacaaa
gaaataaagaaatccGTGGTCTCCCTTGCAAAAATTTACGGTGGTGTTAA
AAACTGTGGCATCATGCAATTTGAAGATAGATACATCTTTACAGAAAGTT
CATCTCCAACAATATGGGTGACTTTGTGTGGAAATCCACAACCTGATTTG
AAATACACGTGGAACGGCGAAACAAGGCTCGCATCTTTAGGCGAAACAAT
CGATTCAGAAACGAAGATGTACAAATATGCAATGGAGCTGGAAAACATCA
GTAGAATGCATTGTGGTACACAAATCAAATTCGTTGCCACTGGATATGAA
AGATTGGAAAAGACAGCTAAAGTTTATGTATTGTATAAACCTGATGCAGG
CGATTTTGAAGTTGTTAAAGAAACAAATCGTCATGGCGACGGAAAGAACT
GCACCGTTTACAACTTCCCTAACTTTAACACAGGATGTCGAGAGCGTTAC
AATATCTATTTTTTTGATAAGTGGGAAAGAGTTTTGAAAGTGTCGGTGAA
TTTATCAATCGGTTTTTATGAATATGAAGACTGCAATCACCATACATCTA
GATACTCCTTCGACGACGTCGCGTTTACAAGAGTTCAAGTCATCAGATGG
GACGGCCTAACGGGAGAAATGTCAGACTTAAAAAGAATCGATGAGAAAAA
AATAGttttagagaACGGACAAAGTGTTGTTAGTCGAAAAAGCATCATCT
TACTTGCAATCGTCTGTTTTGTCAGTGTTGTGGCGATCGTTGTCGTTGTG
CTCAGCTGTCGGTGGACACATTGTTCAAAAAATATCGAAGAAAATCATGC
CAAGAAACTGAAGGAAAGTCAAATGAATGAAGAAGACACAGAAGAAGAAC
gagaagatgaaaagaaaactgaTTCCAAAGAAGTCTTCTTCTATCAAACA
AAACCGACAGCCGTCAAAATAGACGATTTATTGTGAAGACAATACATTGA
ACTGGAATTTTTGGCAAGAGAAATGGTTGGAAAGATTATTGCAATATTAA
GTTTCTTCTGGACAGCATTGGTAGTCTGCTGCACTGTTTCAAGCAAAGGA
ATCGAGATCTCAGTGATCACACCGTTTGAAGGACCGTTTTACGAGGTTGG
GCAAGAAGTTATGATTATTTGGACAATCGAAAAGAATGggaaatcatttt
tttatcGAAATGCCGTTAATTTCTCTATCAAAAAAGATGGTATCACAACA
GATTTGGATATGTTTTCGTTCCCGTTTGACCCAAGCATACAAAACGCAGA
TAATGTTTACATATGGTTTGGTCCTTCAACAATTAATGTGTTGATACCAA
ACCTTCGGTACAACGATACATACGAATTTATTTGCCAGACAGTTCTCACA
CTGGAGaacaaagaaataaagaaatccGTGGTCTCCCTTGCAAAAATTTA
CGGTGGTGTTAAAAACTGTGGCATCATGCAATTTGAAGATAGATACATCT
TTACAGAAAGTTCATCTCCAACAATATGGGTGACTTTGTGTGGAAATCCA
CAACCTGATTTGAAATACACGTGGAACGGCGAAACAAGGCTCGCATCTTT
AGGCGAAACAATCGATTCAGAAACGAAGATGTACAAATATGCAATGGAGC
TGGAAAACATCAGTAGAATGCATTGTGGTACACAAATCAAATTCGTTGCC
ACTGGATATGAAAGATTGGAAAAGACAGCTAAAGTTTATGTATTGTATAA
ACCTGATGCAGGCGATTTTGAAGTTGTTAAAGAAACAAATCGTCATGGCG
ACGGAAAGAACTGCACCGTTTACAACTTCCCTAACTTTAACACAGGATGT
CGAGAGCGTTACAATATCTATTTTTTTGATAAGTGGGAAAGAGTTTTGAA
AGTGTCGGTGAATTTATCAATCGGTTTTTATGAATATGAAGACTGCAATC
ACCATACATCTAGATACTCCTTCGACGACGTCGCGTTTACAAGAGTTCAA
GTCATCAGATGGGACGGCCTAACGGGAGAAATGTCAGACTTAAAAAGAAT
CGATGAGAAAAAAATAGttttagagaACGGACAAAGTGTTGTTAGTCGAA
AAAGCATCATCTTACTTGCAATCGTCTGTTTTGTCAGTGTTGTGGCGATC
GTTGTCGTTGTGCTCAGCTGTCGGTGGACACATTGTTCAAAAAATATCGA
AGAAAATCATGCCAAGAAACTGAAGGAAAGTCAAATGAATGAAGAAGACA
CAGAAGAAGAACgagaagatgaaaagaaaactgaTTCCAAAGAAGTCTTC
TTCTATCAAACAAAACCGACAGCCGTCAAAATAGACGATTTATTGTGAAG
ACAATACATTGAACTGGAATTTTTGGCAAGAGAAATGGTTGGAAAGATTA
TTGCAATATTAAGTTTCTTCTGGACAGCATTGGTAGTCTGCTGCACTGTT
TCAAGCAAAGGAATCGAGATCTCAGTGATCACACCGTTTGAAGGACCGTT
TTACGAGGTTGGGCAAGAAGTTATGATTATTTGGACAATCGAAAAGAATG
ggaaatcatttttttatcGAAATGCCGTTAATTTCTCTATCAAAAAAGAT
GGTATCACAACAGATTTGGATATGTTTTCGTTCCCGTTTGACCCAAGCAT
ACAAAACGCAGATAATGTTTACATATGGTTTGGTCCTTCAACAATTAATG
TGTTGATACCAAACCTTCGGTACAACGATACATACGAATTTATTTGCCAG
ACAGTTCTCACACTGGAGaacaaagaaataaagaaatccGTGGTCTCCCT
TGCAAAAATTTACGGTGGTGTTAAAAACTGTGGCATCATGCAATTTGAAG
ATAGATACATCTTTACAGAAAGTTCATCTCCAACAATATGGGTGACTTTG
TGTGGAAATCCACAACCTGATTTGAAATACACGTGGAACGGCGAAACAAG
GCTCGCATCTTTAGGCGAAACAATCGATTCAGAAACGAAGATGTACAAAT
ATGCAATGGAGCTGGAAAACATCAGTAGAATGCATTGTGGTACACAAATC
AAATTCGTTGCCACTGGATATGAAAGATTGGAAAAGACAGCTAAAGTTTA
TGTATTGTATAAACCTGATGCAGGCGATTTTGAAGTTGTTAAAGAAACAA
ATCGTCATGGCGACGGAAAGAACTGCACCGTTTACAACTTCCCTAACTTT
AACACAGGATGTCGAGAGCGTTACAATATCTATTTTTTTGATAAGTGGGA
AAGAGTTTTGAAAGTGTCGGTGAATTTATCAATCGGTTTTTATGAATATG
AAGACTGCAATCACCATACATCTAGATACTCCTTCGACGACGTCGCGTTT
ACAAGAGTTCAAGTCATCAGATGGGACGGCCTAACGGGAGAAATGTCAGA
CTTAAAAAGAATCGATGAGAAAAAAATAGttttagagaACGGACAAAGTG
TTGTTAGTCGAAAAAGCATCATCTTACTTGCAATCGTCTGTTTTGTCAGT
GTTGTGGCGATCGTTGTCGTTGTGCTCAGCTGTCGGTGGACACATTGTTC
AAAAAATATCGAAGAAAATCATGCCAAGAAACTGAAGGAAAGTCAAATGA
ATGAAGAAGACACAGAAGAAGAACgagaagatgaaaagaaaactgaTTCC
AAAGAAGTCTTCTTCTATCAAACAAAACCGACAGCCGTCAAAATAGACGA
TTTATTGTGAAGACAATACATTGAACTGGAATTTTTGGCAAGAGAAATGG
TTGGAAAGATTATTGCAATATTAAGTTTCTTCTGGACAGCATTGGTAGTC
TGCTGCACTGTTTCAAGCAAAGGAATCGAGATCTCAGTGATCACACCGTT
TGAAGGACCGTTTTACGAGGTTGGGCAAGAAGTTATGATTATTTGGACAA
TCGAAAAGAATGggaaatcatttttttatcGAAATGCCGTTAATTTCTCT
ATCAAAAAAGATGGTATCACAACAGATTTGGATATGTTTTCGTTCCCGTT
TGACCCAAGCATACAAAACGCAGATAATGTTTACATATGGTTTGGTCCTT
CAACAATTAATGTGTTGATACCAAACCTTCGGTACAACGATACATACGAA
TTTATTTGCCAGACAGTTCTCACACTGGAGaacaaagaaataaagaaatc
cGTGGTCTCCCTTGCAAAAATTTACGGTGGTGTTAAAAACTGTGGCATCA
TGCAATTTGAAGATAGATACATCTTTACAGAAAGTTCATCTCCAACAATA
TGGGTGACTTTGTGTGGAAATCCACAACCTGATTTGAAATACACGTGGAA
CGGCGAAACAAGGCTCGCATCTTTAGGCGAAACAATCGATTCAGAAACGA
AGATGTACAAATATGCAATGGAGCTGGAAAACATCAGTAGAATGCATTGT
GGTACACAAATCAAATTCGTTGCCACTGGATATGAAAGATTGGAAAAGAC
AGCTAAAGTTTATGTATTGTATAAACCTGATGCAGGCGATTTTGAAGTTG
TTAAAGAAACAAATCGTCATGGCGACGGAAAGAACTGCACCGTTTACAAC
TTCCCTAACTTTAACACAGGATGTCGAGAGCGTTACAATATCTATTTTTT
TGATAAGTGGGAAAGAGTTTTGAAAGTGTCGGTGAATTTATCAATCGGTT
TTTATGAATATGAAGACTGCAATCACCATACATCTAGATACTCCTTCGAC
GACGTCGCGTTTACAAGAGTTCAAGTCATCAGATGGGACGGCCTAACGGG
AGAAATGTCAGACTTAAAAAGAATCGATGAGAAAAAAATAGttttagaga
ACGGACAAAGTGTTGTTAGTCGAAAAAGCATCATCTTACTTGCAATCGTC
TGTTTTGTCAGTGTTGTGGCGATCGTTGTCGTTGTGCTCAGCTGTCGGTG
GACACATTGTTCAAAAAATATCGAAGAAAATCATGCCAAGAAACTGAAGG
AAAGTCAAATGAATGAAGAAGACACAGAAGAAGAACgagaagatgaaaag
aaaactgaTTCCAAAGAAGTCTTCTTCTATCAAACAAAACCGACAGCCGT
CAAAATAGACGATTTATTGTGAAGACAATACATTGAACTGGAATTTTTGG
CAAGAGAAATGGTTGGAAAGATTATTGCAATATTAAGTTTCTTCTGGACA
GCATTGGTAGTCTGCTGCACTGTTTCAAGCAAAGGAATCGAGATCTCAGT
GATCACACCGTTTGAAGGACCGTTTTACGAGGTTGGGCAAGAAGTTATGA
TTATTTGGACAATCGAAAAGAATGggaaatcatttttttatcGAAATGCC
GTTAATTTCTCTATCAAAAAAGATGGTATCACAACAGATTTGGATATGTT
TTCGTTCCCGTTTGACCCAAGCATACAAAACGCAGATAATGTTTACATAT
GGTTTGGTCCTTCAACAATTAATGTGTTGATACCAAACCTTCGGTACAAC
GATACATACGAATTTATTTGCCAGACAGTTCTCACACTGGAGaacaaaga
aataaagaaatccGTGGTCTCCCTTGCAAAAATTTACGGTGGTGTTAAAA
ACTGTGGCATCATGCAATTTGAAGATAGATACATCTTTACAGAAAGTTCA
TCTCCAACAATATGGGTGACTTTGTGTGGAAATCCACAACCTGATTTGAA
ATACACGTGGAACGGCGAAACAAGGCTCGCATCTTTAGGCGAAACAATCG
ATTCAGAAACGAAGATGTACAAATATGCAATGGAGCTGGAAAACATCAGT
AGAATGCATTGTGGTACACAAATCAAATTCGTTGCCACTGGATATGAAAG
ATTGGAAAAGACAGCTAAAGTTTATGTATTGTATAAACCTGATGCAGGCG
ATTTTGAAGTTGTTAAAGAAACAAATCGTCATGGCGACGGAAAGAACTGC
ACCGTTTACAACTTCCCTAACTTTAACACAGGATGTCGAGAGCGTTACAA
TATCTATTTTTTTGATAAGTGGGAAAGAGTTTTGAAAGTGTCGGTGAATT
TATCAATCGGTTTTTATGAATATGAAGACTGCAATCACCATACATCTAGA
TACTCCTTCGACGACGTCGCGTTTACAAGAGTTCAAGTCATCAGATGGGA
CGGCCTAACGGGAGAAATGTCAGACTTAAAAAGAATCGATGAGAAAAAAA
TAGttttagagaACGGACAAAGTGTTGTTAGTCGAAAAAGCATCATCTTA
CTTGCAATCGTCTGTTTTGTCAGTGTTGTGGCGATCGTTGTCGTTGTGCT
CAGCTGTCGGTGGACACATTGTTCAAAAAATATCGAAGAAAATCATGCCA
AGAAACTGAAGGAAAGTCAAATGAATGAAGAAGACACAGAAGAAGAACga
gaagatgaaaagaaaactgaTTCCAAAGAAGTCTTCTTCTATCAAACAAA
ACCGACAGCCGTCAAAATAGACGATTTATTGTGAAGACAATACATTGAAC
TGGAATTTTTGGCAAGAGAAATGGTTGGAAAGATTATTGCAATATTAAGT
TTCTTCTGGACAGCATTGGTAGTCTGCTGCACTGTTTCAAGCAAAGGAAT
CGAGATCTCAGTGATCACACCGTTTGAAGGACCGTTTTACGAGGTTGGGC
AAGAAGTTATGATTATTTGGACAATCGAAAAGAATGggaaatcatttttt
tatcGAAATGCCGTTAATTTCTCTATCAAAAAAGATGGTATCACAACAGA
TTTGGATATGTTTTCGTTCCCGTTTGACCCAAGCATACAAAACGCAGATA
ATGTTTACATATGGTTTGGTCCTTCAACAATTAATGTGTTGATACCAAAC
CTTCGGTACAACGATACATACGAATTTATTTGCCAGACAGTTCTCACACT
GGAGaacaaagaaataaagaaatccGTGGTCTCCCTTGCAAAAATTTACG
GTGGTGTTAAAAACTGTGGCATCATGCAATTTGAAGATAGATACATCTTT
ACAGAAAGTTCATCTCCAACAATATGGGTGACTTTGTGTGGAAATCCACA
ACCTGATTTGAAATACACGTGGAACGGCGAAACAAGGCTCGCATCTTTAG
GCGAAACAATCGATTCAGAAACGAAGATGTACAAATATGCAATGGAGCTG
GAAAACATCAGTAGAATGCATTGTGGTACACAAATCAAATTCGTTGCCAC
TGGATATGAAAGATTGGAAAAGACAGCTAAAGTTTATGTATTGTATAAAC
CTGATGCAGGCGATTTTGAAGTTGTTAAAGAAACAAATCGTCATGGCGAC
GGAAAGAACTGCACCGTTTACAACTTCCCTAACTTTAACACAGGATGTCG
AGAGCGTTACAATATCTATTTTTTTGATAAGTGGGAAAGAGTTTTGAAAG
TGTCGGTGAATTTATCAATCGGTTTTTATGAATATGAAGACTGCAATCAC
CATACATCTAGATACTCCTTCGACGACGTCGCGTTTACAAGAGTTCAAGT
CATCAGATGGGACGGCCTAACGGGAGAAATGTCAGACTTAAAAAGAATCG
ATGAGAAAAAAATAGttttagagaACGGACAAAGTGTTGTTAGTCGAAAA
AGCATCATCTTACTTGCAATCGTCTGTTTTGTCAGTGTTGTGGCGATCGT
TGTCGTTGTGCTCAGCTGTCGGTGGACACATTGTTCAAAAAATATCGAAG
AAAATCATGCCAAGAAACTGAAGGAAAGTCAAATGAATGAAGAAGACACA
GAAGAAGAACgagaagatgaaaagaaaactgaTTCCAAAGAAGTCTTCTT
CTATCAAACAAAACCGACAGCCGTCAAAATAGACGATTTATTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005492XLOC_005492Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009821-exon-sc0000099-1491911889:441431..441544TCONS_00009821-exon-sc0000099-1491911889:441431..441544Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1510915933:441431..441544TCONS_00009821-exon-sc0000099-1510915933:441431..441544Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1575043694:441431..441544TCONS_00009821-exon-sc0000099-1575043694:441431..441544Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1491911889:442178..442531TCONS_00009821-exon-sc0000099-1491911889:442178..442531Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1510915933:442178..442531TCONS_00009821-exon-sc0000099-1510915933:442178..442531Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1575043694:442178..442531TCONS_00009821-exon-sc0000099-1575043694:442178..442531Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1491911889:443099..443234TCONS_00009821-exon-sc0000099-1491911889:443099..443234Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1510915933:443099..443234TCONS_00009821-exon-sc0000099-1510915933:443099..443234Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1575043694:443099..443234TCONS_00009821-exon-sc0000099-1575043694:443099..443234Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1491911889:443478..443635TCONS_00009821-exon-sc0000099-1491911889:443478..443635Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1510915933:443478..443635TCONS_00009821-exon-sc0000099-1510915933:443478..443635Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1575043694:443478..443635TCONS_00009821-exon-sc0000099-1575043694:443478..443635Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1491911889:444053..444269TCONS_00009821-exon-sc0000099-1491911889:444053..444269Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1510915933:444053..444269TCONS_00009821-exon-sc0000099-1510915933:444053..444269Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1575043694:444053..444269TCONS_00009821-exon-sc0000099-1575043694:444053..444269Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1491911889:445070..445173TCONS_00009821-exon-sc0000099-1491911889:445070..445173Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1510915933:445070..445173TCONS_00009821-exon-sc0000099-1510915933:445070..445173Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1575043694:445070..445173TCONS_00009821-exon-sc0000099-1575043694:445070..445173Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1491911889:445706..445840TCONS_00009821-exon-sc0000099-1491911889:445706..445840Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1510915933:445706..445840TCONS_00009821-exon-sc0000099-1510915933:445706..445840Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1575043694:445706..445840TCONS_00009821-exon-sc0000099-1575043694:445706..445840Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1491911889:448160..448423TCONS_00009821-exon-sc0000099-1491911889:448160..448423Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1510915933:448160..448423TCONS_00009821-exon-sc0000099-1510915933:448160..448423Clytia hemisphaericaexon
TCONS_00009821-exon-sc0000099-1575043694:448160..448423TCONS_00009821-exon-sc0000099-1575043694:448160..448423Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009821-proteinTCONS_00009821-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000099supercontigsc0000099:441431..448423 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.320498	0.421244	0	0	0	0	0	0	0.47707	0.305445	0.790592	0.497057	10.7935	14.8587	0	0	0	0	43.9324	27.0794	0.107783	0	0.216373	0	0	0	0	0	0.170131	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009821 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top