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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009757 ID=TCONS_00009757|Name=TCONS_00009757|organism=Clytia hemisphaerica|type=transcript|length=902bp
CCTGGTAATGGGGTTTGTTTTTTGATACCAAGTCGGCTTTTGATATTACC
TCTAGGAATGAAAGGTGCTGCCTCATTGCCTCTTTGAAGAAAAGGGTTTt
cctcattttttatttgaagtgaGGACTGATCTTGAATCTTTGTAGAAAAT
GGATTATCAACAACCTTTGTAAATAGATTTGTGCTTTTAGCTTGTTCATG
TGCTGATGAAAACATGATTGAACTTTTCTCTACAACCTTTGCAAAAGGAT
TTTCTGCTGATTTCATTGAAGCAGTGGACTGGGACCCAGTATTTTCAACA
TCAATACCAAAGGTTGGTCTTTTCGTGTTTGCGTCTTCTGATTTCCTTGC
AAAAGGATTATCAAGTGTTTGAGATTGTATGAAGATAGGCTTGTCTGTGT
TAACTGCAAAAGGGTTAGCAACAACTTGGTTGGTCTCAtcactttgtttt
tctttgcttgtaGCAAATGGATTTTCAGTCATCTGAGTTGAGAATCCTGA
AGCTGGTTGGTTTGTAATTCCCCCAAAAGGTTTTGAAGAGAAAGGATTTT
CAGTAACAGTTGACTTTCCAAATGATAGATTGTCAGTTTTTCTTCCAAAA
gggttttcattatttttcccAAATAAGGGCAGAGCACTTCCATTTATAAC
TTGTTGTGGATTTCCCCCAAACGGGTTATTCAGAGCAGGTGCAATTGCTT
CAGTTGTCTTTGCAAAAGGATTATCAgctgttttgaaaacattattATCA
ATTCTTGCGGTTAAGAAAGGATTAacttcattttctttgtttttcaccgC
AAAAGGATCCGTGTTAGATGGATGTTCACCCATTTGTTTGATTTCTCTTG
CTGAAAAGCaatcaaaagaagaaagacaaacatataatatttatttaata
TC Run BLAST on NCBI transcript from alignment at sc0000098:534222..535184- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009757 ID=TCONS_00009757|Name=TCONS_00009757|organism=Clytia hemisphaerica|type=transcript|length=963bp|location=Sequence derived from alignment at sc0000098:534222..535184- (Clytia hemisphaerica)
CCTGGTAATGGGGTTTGTTTTTTGATACCAAGTCGGCTTTTGATATTACC
TCTAGGAATGAAAGGTGCTGCCTCATTGCCTCTTTGAAGAAAAGGGTTTT
CCTCATTTTTTATTTGAAGTGAGGACTGATCTTGAATCTTTGTAGAAAAT
GGATTATCAACAACCTTTGTAAATAGATTTGTGCTTTTAGCTTGTTCATG
TGCTGATGAAAACATGATTGAACTTTTCTCTACAACCTTTGCAAAAGGAT
TTTCTGCTGATTTCATTGAAGCAGTGGACTGGGACCCAGTATTTTCAACA
TCAATACCAAAGGTTNACCAATTTCATTGAAGCAGTAGACTGGGACCTAG
TATTTTCAACATCAATACCAAAGGTTGGTCTTTTCGTGTTTGCGTCTTCT
GATTTCCTTGCAAAAGGATTATCAAGTGTTTGAGATTGTATGAAGATAGG
CTTGTCTGTGTTAACTGCAAAAGGGTTAGCAACAACTTGGTTGGTCTCAT
CACTTTGTTTTTCTTTGCTTGTAGCAAATGGATTTTCAGTCATCTGAGTT
GAGAATCCTGAAGCTGGTTGGTTTGTAATTCCCCCAAAAGGTTTTGAAGA
GAAAGGATTTTCAGTAACAGTTGACTTTCCAAATGATAGATTGTCAGTTT
TTCTTCCAAAAGGGTTTTCATTATTTTTCCCAAATAAGGGCAGAGCACTT
CCATTTATAACTTGTTGTGGATTTCCCCCAAACGGGTTATTCAGAGCAGG
TGCAATTGCTTCAGTTGTCTTTGCAAAAGGATTATCAGCTGTTTTGAAAA
CATTATTATCAATTCTTGCGGTTAAGAAAGGATTAACTTCATTTTCTTTG
TTTTTCACCGCAAAAGGATCCGTGTTAGATGGATGTTCACCCATTTGTTT
GATTTCTCTTGCTGAAAAGCAATCAAAAGAAGAAAGACAAACATATAATA
TTTATTTAATATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009757-exon-sc0000098-1575043694:534873..535184 | TCONS_00009757-exon-sc0000098-1575043694:534873..535184 | Clytia hemisphaerica | exon |
| TCONS_00009757-exon-sc0000098-1575043694:534222..534811 | TCONS_00009757-exon-sc0000098-1575043694:534222..534811 | Clytia hemisphaerica | exon |
| TCONS_00009757-exon-sc0000098-1510915933:534873..535184 | TCONS_00009757-exon-sc0000098-1510915933:534873..535184 | Clytia hemisphaerica | exon |
| TCONS_00009757-exon-sc0000098-1510915933:534222..534811 | TCONS_00009757-exon-sc0000098-1510915933:534222..534811 | Clytia hemisphaerica | exon |
| TCONS_00009757-exon-sc0000098-1491911889:534873..535184 | TCONS_00009757-exon-sc0000098-1491911889:534873..535184 | Clytia hemisphaerica | exon |
| TCONS_00009757-exon-sc0000098-1491911889:534222..534811 | TCONS_00009757-exon-sc0000098-1491911889:534222..534811 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098 | supercontig | sc0000098:534222..535184 - |
Blast
The following BLAST results are available for this feature:
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