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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009745 ID=TCONS_00009745|Name=TCONS_00009745|organism=Clytia hemisphaerica|type=transcript|length=2559bp
CAAAATCTTGTACGAAGTGTCTCCTTGAATCTAGACCCAAAGAATACGAC
GCCGCCAACGACGACGGCGACAACAAAGAAAATACCAAGGAACAGTCGTT
TAGGCGtGCCTCAAAATCAATACCATGACTACCGGAGGCGATTTATATGT
TATTGGTGTGATCGCCGCTTCCCACATTTCAGTGCGTTGAAAGCACATAT
TTCGGCCCATTTGGAGAGCGCTAGAAAGTTATGTACCATTTGTAATAAAA
CATTCAGCAAAAAGAGTTCACTGGAAGAACACATCAGAACTCATACGGGT
GAGCGACCATACAAATGCAACCAGTGTGGAAAAACGTTCGTTACATCAGG
AAAGCTGACATCACATTTGAAAATACACGCCGGCATTTACGCCCATCACT
GCCAATTGTGTGGAAAGAAATTCCGCGAACACTACAATTTGAAGATGCAT
ATGAAAATGCACGAGAGGCGTGCTCAAGAGGAGAAGGAacctaaaaaaac
aaagatgTGGAACTGTAAGGAATGCGAGGCGGGTTTCACGCGCAAAGAAG
ACTTGAATTCTCACAAGAAGGAAGATCATAAAACACCACATCAACTCATG
TTAGAAGAACGCAAACTAAAGAGAAAagctgaagaaaaagaaaaagcagT
AAATGAGGATGGTGTATCAGCCGCCAAGAAACGAACTTTGAGAACAACCG
GCTTCACCCAAAAAGAAGATGGCACATATGTTTGCGATTTATGTCAAAAA
GAATTCGTAAAGAAGGATTACCTGAACCGTCATTTAAGACGTCACGAATC
AAGCACCGCTACGGATTGCGGAGAATGCGGGAAGACGTACCGAGATAAAC
CAACTATGCGACAACACATGGTTGATGCGCACGGAAGCGAAGCGAAACAC
TATTGCAATATATGTAAGCAAGGCTTTGTTATTTTGTCAACCTTACAACG
TCACATGCGGATCCATCTCGATTCACGTCCGTTTACTTGCGATCAATGTC
CGGGTACTTACAAATCGAAAGAGGATTTAAGGCGCCATAAGCGGACCCAC
GAGGCCGACCGCCCGTACAAATGCGATATTTGTCATAATGGATTTGTTGA
TAAATCAGGGCTGAACCGTCATATGCGGATTCATACCGGTGAAAAACCAT
TCACGTGTCCGGATTGCGGGCAGTCGTTTACTCAATGTGGAACCATGAAA
CTCCACCGTGCTAAGAGACATCCCAATAGCACTATCGAGCTTACGGACCT
TCGTTCCGGTGCACGAATTGCCGCCGAGATGACGACGAAAACCGCCACTG
ATGAAGACACTCCGAAAATTCCCGAAAAATCTGACCCTGATGAAGAAGTC
ACAGAGTCGGAAGACGAAACTGCTCCTACCACGGAAAACTCCAAGTTTAG
TACGGTTCAAGAACTCTTGAATTGGATTGGTCAAAATCAGAATTCAGAAC
AGAATACGTCATACGAAATGTAGTGTGACTTGATTCTGAAAAGGTACAAC
AACTGTGTATTGTTTAGATTCAGANTTCATACGAAATGTAGTGAGACTTG
ATTCTGAAAAGGTACAATAATTGTGTATGGTTTAGATTCAGAGATTACCA
ATTTCCcatcatttttccattttgtgcAGACGAACGATTGAATGAGCTTG
ATACTCTGGAAATGACTCGGAAAATGTTTTTCGAGGAATGAGACATTTTC
ATTCGTATGTGTATCAGATATTCTCTCTACAttttttaggcgtacaaact
ttcgctaGGTCgagaaatcgcgaaatttacgaaaatttattttcgtgAAT
TGGGCGAAAAATGTTCTTTCAATCAAGAAAAGTTTCACacgaaaaaatgg
cttagagtgACAAACATTTCTTGAATTGAAAGTAAAACTTCCTTATTATG
AGGATTAAGCAGGTTAAAGAGCGCCATAAatgttacattttattttaagt
tagaagtttatagattttctattttgtttagATATTTCGCGAGCatcata
aacttttgcgaatggccttttaagaattttagagacatttactttcgcga
aaagagctaaaattcgcgaaaattgcgaaagtttctgttcgcgaaagttt
gtacgtaCGCCTGAAGTAAGCCCAACGACCATATTTCATACAGAAAATAT
TCATCTTTCTTGATGTATGATAAAGTCTTTTACTATGTTATCAAATCAGG
TGTCAGTAAAATTACAAAGACGCGAATAACCATTGATACAGTTTGGTAAG
ATGGCGATCAAATTCGAAATTGAAGAAGATGTTATTAATGACGGCTTCTT
TGAAAAGGACTAGTAAATTGTCTAAACTTTCATAGGTactttttattgat
ttatttgtAATGATTAGTTACATGTTTGGACCAAAAAGGACGGTGGCCCA
TAATGCTCACGGCGTACTTCCAGTTCTGACACACctctaggctgctggca
tccactaacggattcgtgttCCTtatacctggggttttgtagaggtctgc
gattcagactaacaCACTTCCAGTTCACAAATTTTACAAGTGCTGGAAGT
GTCTTGTGA Run BLAST on NCBI transcript from alignment at sc0000098:420442..432504- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009745 ID=TCONS_00009745|Name=TCONS_00009745|organism=Clytia hemisphaerica|type=transcript|length=12063bp|location=Sequence derived from alignment at sc0000098:420442..432504- (Clytia hemisphaerica)
CAAAATCTTGTACGAAGTGTCTCCTTGAATCTAGGTTAGTAGCAATCATT
TGTAAGTGTGAACATAATGATGTCAAAGAATGTCTCCAAAATCTTGTACC
AAGAGTCTCCTTGAATCTATAGAAATATGTTCTAAATGTGAACAATAGTT
ACACCCCTGTGTCACAGACCCGGTGGGATCCTTCCCCACTGGAAAACTTT
GCCAAAATTTCGTCCACTGTGGGAAAAATAACCTACAATTTCGATCCAAC
TGGAAAATTGACTTTTAGTATAAATTTAATCTCCATTCAATGGAAAAAGT
TGCAATCCAAAAGTATCTCAATTAAATTTTTTACCTGAGAATGATTTCTA
TTGATTATTATTCAAAAAACATTTCAACAAATATTTTTCAGCATAAGCTT
TTCGTTTTATTAAAAAACATCATCAGTGCATATACAAGTAAAACGTTCAA
AATAAAATGNACGGAAACAAACTTTTTGGGTAATTCGAACAGGTTTTCGG
GTATGATCATATCATTCTGCTCTTTTTCATGAAAAATCTTAACAACACTT
GCTACAAATCTTGAAGGGAAACCAGCTCTTTCAAACTTATCAACTACAAT
TTCCTTTTCCATTGAAAAATCTGATGCAATATTCTTTGTTCGATGTAGGT
CAACATTCACAGCATTTCGCTTGAACTTTTTGGGAATTTTTGATGACCAA
TGGACTGGAACCTTTTTATCACTCCGAAATACTGATGTGCTAATTTCGCC
ATTTTCATACGTTAATTTGGTGTCAAGGGATTTTTCGGGTTTCACTTCAA
CTGTGAACTTGATATTTGGATGATAGTTATTCAGACTCTCGAGAAGGGTA
TCCGGTTCATCTTTATGTCGTTTGATTATTAAATCATCGACAAACCTTTT
GTAAAACTCTGGTTCGGTAGGGGTTATGACATCTTTTTCCAACTTTGTCA
TGTAAATGTATCGAAAGTAACTGACAATGGACCACCCATAGTGCAGCCAT
CGATCTGTTTGTAAAATTTGTCGTTGAACATAAAAAGACTATCAGTGGAT
AATTTTAGAAGTAAACGCTTGAAAACTGTTTTTGAAGCAATTGGTTTGAA
TTTCTTTCTATTGTAGATTTTGTCAATAATATAATCGATAGTTGGACGTA
CCGGAACATTTGTAAATAGACTTTCAACATCGTACGAAACAAACTCCTCC
GAATCATTCAATCGCGGTAAATTTCTTATCATTGAAGGGAATTTTTGAGT
GTTTTTGATCACGTAGTCATTTTCGTCAACCAAAGGTTTTAAGTAGTTTG
CGATAACTTGAGACGCGTTGTATGTTGCAGTACCAACTTGAGCGATAATA
GGACGAAACTTCAAGTCGTTTACGTTGATTTCCGTATTGCTTTTGAACTG
GTTGATTTGATGACGGTATCATGTCTTTATATTTTTCAAACTTTTTGAAA
TTTCTGTAGAGGAAACTTTTGAATTTTTTGAGGTCTTCCATGGTAGTATC
AGTTGAATTTTTGTAAACACCTTTTGTGATTCCTTCATCGACCATACTTT
GAAGTNTTTTCTCAAACTTTTAAAAAAAGTTTGTCATAACCCCTACCGAA
CCAGAGTTTTACAAAAGGTTTGTCGATGATTCAATAACCAAACGACATAA
AGATGAACCGGATACCCTTCTCGAGAGTCTGAATAACTATCACCCAAATA
TCAAGTTCACAGTTGAAGTGAAACCCGAAAAATNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGT
ATATGCACTGATGATGTTTTTTAATAAAACGAAAAGCTTATGCTGAAAAA
TATTTGTTGAAATGTTTTTTGAATAATAATTAATTTTCTGGCTATATTTT
TTTACAACAACGATTTCTATTGACTGAAAGCTATTTTGATGATCAAGAAG
TGTTACTGGTAACAGATAAATTTATAGGTCATTGCGTTATGGATTGTATC
TAGTCCGTATAAAACACCCTGGTCTGGAAGGCTATTGTTGTAACTTTTTG
TTAACATTTCCCTTTGTTTAATAACGATTATAAAAATCGATTTGCTCAGT
TTTTGATCACGTTACCAAATACTCCTCCTGAGATTGGTTCAAAAGTTGAT
CACATGATCAGAAAATGAGCAAACCAAACTAATTTATCAACGCAAGTTCA
AATTCGAAACAATAGAAAGAACCAAAAGGCTTCCAAACCGGGGTTTCTTA
TACGGACTATGATCTAGCATTCATGTTTTCGTTTCAGACCCAAAGAATAC
GACGCCGCCAACGACGACGGCGACAACAAAGAAAATACCAAGGAACAGTC
GTTTAGGCGGTAAATCTATGTAGTTTTGTAGTTTTCGTCCATTGAGTTTA
AAGCCCGAAGGGCTAGAGTAGAANGGTAAATCTATGTAGTTTTCGTCCAT
TGAGTTTAAAGCCTGAAGGGCTAGAGTAGAATCTCTAAACCTTTCCGAGG
CAAGAAAAAGTGAAGCCACTTACTTCCCATCCAGGAGTCTCGAGTCTAGC
CCTTCGGGCTTGGAAGTGAATGTTTTCGCCATCATGGAAGTAAATGTTCG
AATCTGTACGCAAATCGAACGTTTGCTTCCATAATGGCGAAATCACGAAA
CTTAACAAAACATAAAAAAACATTGACACTTATCAAGCCTTTTAAGGACG
CGGAAAGATTTTCTAAAAACAAATTGAAGAATCTTGATTTCTTTTTCTCT
TTTTTGGTTGGAAAAAATAGTCCACCTAAAGCTTTTTGATAGACTGGATG
GTACGATCATTTGGCCCCTTCTTGGTATATGATAGCTTTCAATTTTTGTT
TTTTTGCCTCTACAATCAGTGCCATAACATGTTGGCACTTTTGGCTAATT
TACCATTTTTGGAAAATTGAAGTTCGAGCGAGAATGTAAATTTCAGGCCT
TAAACTTGATTTCATCGATTATTTCGATCTGGGAGGGATTTATTGGTTTC
TAGGCTATATTTCAAGCCCTACTGGACCATTTTTGAACTTTTGGATCCTT
AGATCCTAAGGTCCTAAGTTTTAAGTCTAGCGTTAAAACTCAGAGTTAAA
ACTCTACCTTTCGAACCTACTTTAGAGCACTTATAAATCGATTGTGGTTT
CAAAACTTCCCAGTGGATTTCCCTTTTGTGCCATGTATTTTGTCACTGAT
TGTAGTTGTTTTTGAAAGGTAACAAGGGGGTGAAGGGACCTTTTTGTTTG
AAAATAAGGAATTGCAAATTTTATTTATCAACTTCGAGCACTTTTTTTGT
TACTTTGGATTTGTGCGTTTTTTGTTTTCCAAAATGGTGATCTCACCAAG
TCTAAGTCTACTTAAACTTGACTCGGCGTCATCAAAAAATATCAATAAGC
AAATTTCAGCCTGAAGTAGACTCCAGTAGAAAGGAAAATGGAGGTCGAAA
CTAGTAACCGAGGAGCATTTTGATGCCCCTAACATTTCGCTTCCCTCACA
AAAAAGCTACTAGACCCTACAGTTGACTTTCTCTAATTCGATCTTCGCTG
GACCAAAAATTCTCTTCCAATTACAAAGAGATTCGAATTATAGAGAGTAT
TTTAGGTGGCTTGCTCATTGACGGGTTCTGAGAATTAGTTTGAATTAGAG
AAAGATTCGAATATGAGAAGTTCGAATAAACTGTCACCCACCATGACTGG
GCAACAAAAAAAATGTTCACCCTCTAAATGTTCAAAATAGATGCCACTTT
AATGGACTAAAATATTCTAACTTGATTTTGACTTGTTAGAATCATTGCAT
TAATATTTTCAATCTTTTGTACCGTCATTTCTCCATTTTAGAAGATTGAG
TTTGAAAAATCAATTTGAAATTGAGTTTTTGCCACCGAATAACGGTGGTA
AAAAAGTGCTTGAAAAATACCCTGGGTTACTGTATTCTATTTGTAGGACC
ACATTCGCATGATTACAGGCGGTTCGTTTGTTTTTGGTGTGACCGGCGCT
TTACAATCTACAGCATGTTTAAAGTTCACGTCGCCTCTCATCTGGAGGCG
GTCAGGGTGCCATGTACAATATGTTCTAAATCATTTACGACAAAGAGTTC
CTTGAAAGACCATATGCGAACTCACACAGGTAAATACATCACTTTGTTCT
TATAAAAAAATGTACTTTATTTTTTATTTACAGTGCCTCAAAATCAATAC
CATGACTACCGGAGGCGATTTATATGTTATTGGTGTGATCGCCGCTTCCC
ACATTTCAGTGCGTTGAAAGCACATATTTCGGCCCATTTGGAGAGCGCTA
GAAAGTTATGTACCATTTGTAATAAAACATTCAGCAAAAAGAGTTCACTG
GAAGAACACATCAGAACTCATACGGGTAATAACCACTGACCTTTATATAC
CCCTGGACCAAGTTATATCCGCCATCAATTTTTTGAATTGGTACCCGTAA
AGAAGCCATTGCAGTGTTCAAAATGAACGTTTAACGGCGCTACATCATCA
AAAGTATTCCAGGAAAAATAAATCTAGCGCTCTCAATTCATTTACACCGC
TATTGAGTAGTGCCACCATTAGGGTACCACTTTTCAAAAAACTCCGATCA
AAGATTTTTCTTGGCCGGGATTGAGAAGCTTGGTCCAGGGTTTATTAAAG
GTCAGTGATAATAACACTGATCTCTTTCGTAGGGGATCTCTACATATATT
TTCTAATCTACTACCCATGTATGTTGAATATAAAATAATATAATAGACCT
TTTCATAAAATAACAGCACGAACAACATCTGCCTCGTTTTCAAACAATCA
CCAAGATGATCATATCTTATGCGGCCTAAAATGACACATCTTTCAATGAA
GTCGAGTTTTGATGAACTCCATTTGGTATTAAAAAGGGGCCAGTAGAAGT
TCACAATGTAATTTATGAAAAGGCCCATTAAAGTCCTCCTGCAGATTCAA
CAGTGATATAGTGGAATCCATCTGATAAAAATTGTTCCTCTTATTTTATT
TCAGGTGAGCGACCATACAAATGCAACCAGTGTGGAAAAACGTTCGTTAC
ATCAGGAAAGCTGACATCACATTTGAAAATACACGCCGGCATTTACGCCC
ATCACTGCCAATTGTGTGGAAAGAAATTCCGCGAACAGTAAGTTGTAGTC
ATCGTCATATTCCTTTAGAAGAGGAAAATATAGAAAACTCTGAACTAGAA
AAATATATCCCATTTTGTACGAGTAAAAGTGTGATAACTGGTTTATCGTC
AACTTGAAAAATATTAAAAAACTTTTCTGGGGCCTGGACTTCCCGAGTTA
TTTTTTTCCGAGTTATTTTTCATGTGACCTCATAAATCACAAAATATGGT
AAGTTTTGTTTTCTAGCTTTTAACTTTTCGAGTTATTTGGTGTTTTTTAA
CTCAGTTTTTTTTTCGTGCCTTTAACTTTTTGAGTTATTAGATAAATTTT
AACTAGGGTTTTTTTCTTGGCCTCGATTTATGGAAAATTCGACTATGGGT
TTGTTTCGTGAAGGGACAGATTTGTGTTAAATATATCAACAAAAAACTCG
AAAAGTTAGAACAAAACCGAGTATGCGTATTGGAAGTGAAAAGAAAAGGA
GATTGTACAAAAATTTTATTTCTCGCTTACCAGACCCCTTTTTTGAACGA
GGTCTTGTTTTTTTACCGCATATGAAAATGCACGAGAGGCGTGCTCAAGA
GGAGAAGGAACCTAAAAAGTGTATTTTACTTCATAGCTACAATTTGAAGA
TGCATATGAAAATGCACGAGAGGCGTGCTCAAGAGGAGAAGGAACCTAAA
AAAACAAAGATGTGGAACTGTAAGGAATGCGAGGCGGGTTTCACGCGCAA
AGAAGACTTGAATTCTCACAAGAAGGAAGATCATAAAACACCACATCAAC
TCATGTTAGAAGAACGCAAACTAAAGAGAAAAGCTGAAGAAAAAGAAAAA
GCAGGTATCTAGTCTAGGCTAGTTTTTTTTTTTCTTTAAACAGACCTGAT
TTACAGTTTACGCTCTTTAATTTGATTTTCAAGGGGAATAGCATTTTCAT
CGAATAAGGGTAAGGGAGGGTATTGAAGTGTAGAGCTTTGTCTGTAAGAG
TTTCTTGTTGACGGTGACTTTCAATATGATCGAATAAGGGAGCGTATCGA
ATAGTAGAGCGTCGTTTATGAGAGTTTCTTGTTGACGGTGACTTTCAATA
TGATCGAATAAAAGAGCGTATTGAATAGTGCAACGTCGAATTAGAGAGCG
TCGATCGTCGTTGACGGGGGGGGGGGGGTCCAAAANTCCTTCACTCTGTT
TTAAAAAGGGTTGTACGCGCTCCAGAACTCTCACGTCCCTTCACTCTGTT
TTAAAAAGGGTTGTACGCGCTCCAGAACTCTCACGTTCCTTCACTCAGTT
TTAAAAAGGGTTGTACGCGCTCCAGAACTCTCACGTTCCTTCACTCTGTT
TTAAAAAGGGTTGTACGCGCTTCAGAACTCTCACGTTCCTTCACTCTGTT
TTAAAAAGGGTTGTACGCGCTCCAGAACTCTCACGTTCCTTCACTCTGTT
TTAAAAAGGGTTGTACGCGCTCCAGAACTCTCACGTTCCTTCACTCAGTT
TACAAAGCAAAGAGAGAGACAAAAGTCAACAATCGTGTACAAAATGAACA
GTAAATCTTTCATTATTCGTTGAGCTCGGTAAATATGTTGATCTATTATT
ATTCTCTGATTATGTTTTTCTTCTCTTTGCATTCATAGTAAATGAGGATG
GTGTATCAGCCGCCAAGAAACGAACTTTGAGAACAACCGGCTTCACCCAA
AAAGAAGGTCAGTTTGCCCGTCATAATAGTATTGATTCTCATTTTTTTTA
AGAGATAAAATAAACTCTTGGATGGAAGATGAAGCCATTTATTCCCTATT
TGACTGGTTTTCACAAAAACACCGGATTGAAAATAAAATATGTCGCCATA
TTTCAAAAATAGGAAAACTAAGAAAGCGCGTCGTTTTTAATCTGTCATTC
TAAATAAGGCGTATATCTTATGTTTTTACTTTTTCTTGCTTGAGAAAGAG
TTAAGATTCCAATCTACCCCATTAAACTCTATGATTGCTTCGGCCCACTG
TAAGATTATAATAAGGTCCTCCAAATAAACGAAATCTGCGTGGAAAAGAT
GCTACTAAGCTCAGCTACGGGGGGGGGGGGGGGGGAAAAAGGGGGGGGGG
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAACAGTAAATCTTTCATTATTCGTTGAGCTCGGTAAATATGTTG
ATCTATTATTAGTCTCTGATTATGTTTTTCTTCTCTTTGCATTCATAGTA
AATGAGGATGGTGTATCAGCCGCCAAGAAACGAACATTGAGAACAACCGG
CTTCACCCAAAAAGAAGGTCAGTTTGCCCGTCGGTAGGCAAAAATGGGTG
CTGGGTATGTGCGGACGATAAGGGTCGGTTTTTTTACCTTCCAAAGTCTC
TCTAAGGTTTACAAAAACCAGAAAATTTCAAAGTAATCCCTCTAAGGGTC
GGAAAATTAACTATTTTTAGGAAACTTTTTGATGAGAGAAAAAATTGTAA
GAAAGTCTCCCTAAGGGTAAGACATTTTTCCAAAAAGTCTCTTCAGGCAC
TTTTTCGATAGAAATTAGAAACTAGTTCTATCTAAGGGTCGGTTTTCGGA
GGTCCCGTCGGCACATATTCCTCATCCGCCAACCCTAGTACCCCCCCCCT
TTAAACAAACAACACAACACAAACACATCTCAGATTATCCAAATTCTCCA
AATTTCCGAATCTCTTTTATAGATGGCACATATGTTTGCGATTTATGTCA
AAAAGAATTCGTAAAGAAGGATTACCTGAACCGTCATTTAAGACGTCACG
AATCAAGCACCGCTACGGATTGCGGAGAATGCGGGAAGACGTACCGAGAT
AAACCAACTATGCGACAACACATGGTTGATGCGCACGGAAGCGAAGCGAA
ACACTATTGCAATATATGTAAGCAAGGCTTTGTTATTTTGTCAACCTTAC
AACGTCACATGCGGATCCATCTCGATTCACGTCCGTTTACTTGCGATCAA
TGTCCGGGTACTTACAAATCGAAAGAGGATTTAAGGCGCCATAAGCGGAC
CCACGAGGCCGACCGCCCGTACAAATGCGATATTTGTCATAATGGATTTG
TTGATAAATCAGGGCTGAACCGTCATATGCGGATTCATACCGGTGAAAAA
CCATTCACGTGTCCGGATTGCGGGCAGTCGTTTACTCAATGTGGAACCAT
GAAACTCCACCGTGCTAAGAGACATCCCAATAGCACTATCGAGCTTACGG
ACCTTCGTTCCGGTGCACGAATTGCCGCCGAGATGACGACGAAAACCGCC
ACTGATGAAGACACTCCGAAAATTCCCGAAAAATCTGACCCTGATGAAGA
AGTCACAGAGTCGGAAGACGAAACTGCTCCTACCACGGAAAACTCCAAGT
TTAGTACGGTTCAAGAACTCTTGAATTGGATTGGTCAAAATCAGAATTCA
GAACAGAATACGTCATACGAAATGTAGTGTGACTTGATTCTGAAAAGGTA
CAACAACTGTGTATTGTTTAGATTCAGANTTCATACGAAATGTAGTGAGA
CTTGATTCTGAAAAGGTACAATAATTGTGTATGGTTTAGATTCAGAGATT
ACCAATTTCCCATCATTTTTCCATTTTGTGCAGACGAACGATTGAATGAG
CTTGATACTCTGGAAATGACTCGGAAAATGTTTTTCGAGGAATGAGACAT
TTTCATTCGTATGTGTATCAGATATTCTCTCTACATTTTTTAGGCGTACA
AACTTTCGCTAGGTCGAGAAATCGCGAAATTTACGAAAATTTATTTTCGT
GAATTGGGCGAAAAATGTTCTTTCAATCAAGAAAAGTTTCACACGAAAAA
ATGGCTTAGAGTGACAAACATTTCTTGAATTGAAAGTAAAACTTCCTTAT
TATGAGGATTAAGCAGGTTAAAGAGCGCCATAAATGTTACATTTTATTTT
AAGTTAGAAGTTTATAGATTTTCTATTTTGTTTAGATATTTCGCGAGCAT
CATAAACTTTTGCGAATGGCCTTTTAAGAATTTTAGAGACATTTACTTTC
GCGAAAAGAGCTAAAATTCGCGAAAATTGCGAAAGTTTCTGTTCGCGAAA
GTTTGTACGTACGCCTGAAGTAAGCCCAACGACCATATTTCATACAGAAA
ATATTCATCTTTCTTGATGTATGATAAAGTCTTTTACTATGTTATCAAAT
CAGGTGTCAGTAAAATTACAAAGACGCGAATAACCATTGATACAGTTTGG
TAAGATGGCGATCAAATTCGAAATTGAAGAAGATGTTATTAATGACGGCT
TCTTTGAAAAGGACTAGTAAATTGTCTAAACTTTCATAGGTACTTTTTAT
TGATTTATTTGTAATGATTAGTTACATGTTTGGACCAAAAAGGACGGTGG
CCCATAATGCTCACGGCGTACTTCCAGTTCTGACACACCTCTAGGCTGCT
GGCATCCACTAACGGATTCGTGTTCCTTATACCTGGGGTTTTGTAGAGGT
CTGCGATTCAGACTAACACACTTCCAGTTCACAAATTTTACAAGTGCTGG
AAGTGTCTTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009745-exon-sc0000098-1575043694:432471..432504 | TCONS_00009745-exon-sc0000098-1575043694:432471..432504 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1575043694:428496..428567 | TCONS_00009745-exon-sc0000098-1575043694:428496..428567 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1575043694:426480..426671 | TCONS_00009745-exon-sc0000098-1575043694:426480..426671 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1575043694:425718..425850 | TCONS_00009745-exon-sc0000098-1575043694:425718..425850 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1575043694:424901..425118 | TCONS_00009745-exon-sc0000098-1575043694:424901..425118 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1575043694:424048..424116 | TCONS_00009745-exon-sc0000098-1575043694:424048..424116 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1575043694:420442..422282 | TCONS_00009745-exon-sc0000098-1575043694:420442..422282 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1510915933:432471..432504 | TCONS_00009745-exon-sc0000098-1510915933:432471..432504 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1510915933:428496..428567 | TCONS_00009745-exon-sc0000098-1510915933:428496..428567 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1510915933:426480..426671 | TCONS_00009745-exon-sc0000098-1510915933:426480..426671 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1510915933:425718..425850 | TCONS_00009745-exon-sc0000098-1510915933:425718..425850 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1510915933:424901..425118 | TCONS_00009745-exon-sc0000098-1510915933:424901..425118 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1510915933:424048..424116 | TCONS_00009745-exon-sc0000098-1510915933:424048..424116 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1510915933:420442..422282 | TCONS_00009745-exon-sc0000098-1510915933:420442..422282 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1491911889:432471..432504 | TCONS_00009745-exon-sc0000098-1491911889:432471..432504 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1491911889:428496..428567 | TCONS_00009745-exon-sc0000098-1491911889:428496..428567 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1491911889:426480..426671 | TCONS_00009745-exon-sc0000098-1491911889:426480..426671 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1491911889:425718..425850 | TCONS_00009745-exon-sc0000098-1491911889:425718..425850 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1491911889:424901..425118 | TCONS_00009745-exon-sc0000098-1491911889:424901..425118 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1491911889:424048..424116 | TCONS_00009745-exon-sc0000098-1491911889:424048..424116 | Clytia hemisphaerica | exon |
| TCONS_00009745-exon-sc0000098-1491911889:420442..422282 | TCONS_00009745-exon-sc0000098-1491911889:420442..422282 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098 | supercontig | sc0000098:420442..432504 - |
Blast
BLAST of TCONS_00009745 vs. Swiss-Prot (Human)
Match: ZN112 (Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=1 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 1.127e-56 Identity = 120/373 (32.17%), Postives = 181/373 (48.53%), Query Frame = 1
Query: 94 SRLGVPQNQYHDYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREHYNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKK-EDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCDICHNGFVDKSGLNRHMRIHTGEKPFTCPDCGQSFTQCGTMKLHR 1209
S L V Q + H + + C CD+ F S L+AH H C C K FS+ S L+ H R HTGE+PYKC +CGK F S L H ++H G C+ CGK F +NL++H ++H K + C+EC GF++ L +H++ + P+Q +E G S +++ L++ + Y+C++C K F ++ YL H R H C CGK + + H H + C +C +GF S LQ H R+H++ RP+ C+QC + L+ H R H ++PYKC++C GF +S L H R+HTGEKP+ C CG+ F + +H+
Sbjct: 538 SVLNVHQ-RVHTGEKPYKCEECDKGFSRSSYLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQRVHTGEKPYKCEECGKGFSRSSHLQGHQRVHTGEKPFKCEECGKGFSWSFNLQIHQRVH----------TGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQ------------------CDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVHTRVKPYKCEMCGKGFSQSSRLEAHR-RVHTGGKPYKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCGKGFSGYSSLQAHHRVHTGEKPYKCEVCGKGFSQRSNLQAHQRVHTGEKPYKCDACGKGFRWSSGLLIHQ 880 HSP 2 Score: 139.043 bits (349), Expect = 1.611e-33 Identity = 90/318 (28.30%), Postives = 134/318 (42.14%), Query Frame = 1
Query: 124 HDYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREHYNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKKEDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCD 1077
H + F C C + F L+ H H C C K FSK S+L H R HTGE+PY+C++CGK+F L SH +H+G + C++CGK F + L+ H ++H R K + C+ C GF++ L +H R + T G Y C++C K F + L H R H C +CGK + +++ H H E + C +C +GF S LQ H R+H +P+ CD C ++ L H+R H +D+ YK +
Sbjct: 631 HTGEKPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQCDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVHTR----------VKPYKCEMCGKGFSQSSRLEAH---------------------------------------RRVHTGG------KPYKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCGKGFSGYSSLQAHH-RVHTGEKPYKCEVCGKGFSQRSNLQAHQRVHTGEKPYKCDACGKGFRWSSGLLIHQRVHSSDKFYKSE 892 HSP 3 Score: 136.732 bits (343), Expect = 8.021e-33 Identity = 103/365 (28.22%), Postives = 148/365 (40.55%), Query Frame = 1
Query: 127 DYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREH---YNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKKEDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCDICHNGFVDKSGLNRHMRIHTGEKPFTCPDCGQSFTQCGTMKLHRA 1212
+Y + FIC S L H+E C FS S ++ HT E+PYK C +F + L H KIH G K +EH +N +K H+R +K + C C GF + LN H++ V +K Y C+ C K F + YL H R H C ECGK + ++ H H E + C C +GF S LQ H R+H +PF C++C + +L+ H+R H ++PYKC+ C GF S L H R+HTGEKP+ C +CG+SF+Q ++ H++
Sbjct: 419 EYGKSFICS---------SNLDIQHRVHMEENSYNSEECGNGFSLASHFQDLQIVHTKEQPYKRYVCSNSFSHNLYLQGHPKIHIG---------EKPRKEHGNGFNWSSKLKDHQRVHTGQKP------YKCNICGKGFNHRSVLNVHQR-------------------------------VHTGEK--------------PYKCEECDKGFSRSSYLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQ-RVHTGEKPYKCEECGKGFSRSSHLQGHQRVHTGEKPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQCDECGKSFSQRSYLQSHQS 713
The following BLAST results are available for this feature:
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