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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009742 ID=TCONS_00009742|Name=TCONS_00009742|organism=Clytia hemisphaerica|type=transcript|length=2556bp
AATCTTGTACGAAGTGTCTCCTTGAATCTAGACCCAAAGAATACGACGCC
GCCAACGACGACGGCGACAACAAAGAAAATACCAAGGAACAGTCGTTTAG
GCGtGCCTCAAAATCAATACCATGACTACCGGAGGCGATTTATATGTTAT
TGGTGTGATCGCCGCTTCCCACATTTCAGTGCGTTGAAAGCACATATTTC
GGCCCATTTGGAGAGCGCTAGAAAGTTATGTACCATTTGTAATAAAACAT
TCAGCAAAAAGAGTTCACTGGAAGAACACATCAGAACTCATACGGGTGAG
CGACCATACAAATGCAACCAGTGTGGAAAAACGTTCGTTACATCAGGAAA
GCTGACATCACATTTGAAAATACACGCCGGCATTTACGCCCATCACTGCC
AATTGTGTGGAAAGAAATTCCGCGAACACTACAATTTGAAGATGCATATG
AAAATGCACGAGAGGCGTGCTCAAGAGGAGAAGGAacctaaaaaaacaaa
gatgTGGAACTGTAAGGAATGCGAGGCGGGTTTCACGCGCAAAGAAGACT
TGAATTCTCACAAGAAGGAAGATCATAAAACACCACATCAACTCATGTTA
GAAGAACGCAAACTAAAGAGAAAagctgaagaaaaagaaaaagcagTAAA
TGAGGATGGTGTATCAGCCGCCAAGAAACGAACATTGAGAACAACCGGCT
TCACCCAAAAAGAAGATGGCACATATGTTTGCGATTTATGTCAAAAAGAA
TTCGTAAAGAAGGATTACCTGAACCGTCATTTAAGACGTCACGAATCAAG
CACCGCTACGGATTGCGGAGAATGCGGGAAGACGTACCGAGATAAACCAA
CTATGCGACAACACATGGTTGATGCGCACGGAAGCGAAGCGAAACACTAT
TGCAATATATGTAAGCAAGGCTTTGTTATTTTGTCAACCTTACAACGTCA
CATGCGGATCCATCTCGATTCACGTCCGTTTACTTGCGATCAATGTCCGG
GTACTTACAAATCGAAAGAGGATTTAAGGCGCCATAAGCGGACCCACGAG
GCCGACCGCCCGTACAAATGCGATATTTGTCATAATGGATTTGTTGATAA
ATCAGGGCTGAACCGTCATATGCGGATTCATACCGGTGAAAAACCATTCA
CGTGTCCGGATTGCGGGCAGTCGTTTACTCAATGTGGAACCATGAAACTC
CACCGTGCTAAGAGACATCCCAATAGCACTATCGAGCTTACGGACCTTCG
TTCCGGTGCACGAATTGCCGCCGAGATGACGACGAAAACCGCCACTGATG
AAGACACTCCGAAAATTCCCGAAAAATCTGACCCTGATGAAGAAGTCACA
GAGTCGGAAGACGAAACTGCTCCTACCACGGAAAACTCCAAGTTTAGTAC
GGTTCAAGAACTCTTGAATTGGATTGGTCAAAATCAGAATTCAGAACAGA
ATACGTCATACGAAATGTAGTGTGACTTGATTCTGAAAAGGTACAACAAC
TGTGTATTGTTTAGATTCAGANTTCATACGAAATGTAGTGAGACTTGATT
CTGAAAAGGTACAATAATTGTGTATGGTTTAGATTCAGAGATTACCAATT
TCCcatcatttttccattttgtgcAGACGAACGATTGAATGAGCTTGATA
CTCTGGAAATGACTCGGAAAATGTTTTTCGAGGAATGAGACATTTTCATT
CGTATGTGTATCAGATATTCTCTCTACAttttttaggcgtacaaactttc
gctaGGTCgagaaatcgcgaaatttacgaaaatttattttcgtgAATTGG
GCGAAAAATGTTCTTTCAATCAAGAAAAGTTTCACacgaaaaaatggctt
agagtgACAAACATTTCTTGAATTGAAAGTAAAACTTCCTTATTATGAGG
ATTAAGCAGGTTAAAGAGCGCCATAAatgttacattttattttaagttag
aagtttatagattttctattttgtttagATATTTCGCGAGCatcataaac
ttttgcgaatggccttttaagaattttagagacatttactttcgcgaaaa
gagctaaaattcgcgaaaattgcgaaagtttctgttcgcgaaagtttgta
cgtaCGCCTGAAGTAAGCCCAACGACCATATTTCATACAGAAAATATTCA
TCTTTCTTGATGTATGATAAAGTCTTTTACTATGTTATCAAATCAGGTGT
CAGTAAAATTACAAAGACGCGAATAACCATTGATACAGTTTGGTAAGATG
GCGATCAAATTCGAAATTGAAGAAGATGTTATTAATGACGGCTTCTTTGA
AAAGGACTAGTAAATTGTCTAAACTTTCATAGGTactttttattgattta
tttgtAATGATTAGTTACATGTTTGGACCAAAAAGGACGGTGGCCCATAA
TGCTCACGGCGTACTTCCAGTTCTGACACACctctaggctgctggcatcc
actaacggattcgtgttCCTtatacctggggttttgtagaggtctgcgat
tcagactaacaCACTTCCAGTTCACAAATTTTACAAGTGCTGGAAGTGTC
TTGTGA Run BLAST on NCBI transcript from alignment at sc0000098:420442..432501- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009742 ID=TCONS_00009742|Name=TCONS_00009742|organism=Clytia hemisphaerica|type=transcript|length=12060bp|location=Sequence derived from alignment at sc0000098:420442..432501- (Clytia hemisphaerica)
AATCTTGTACGAAGTGTCTCCTTGAATCTAGGTTAGTAGCAATCATTTGT
AAGTGTGAACATAATGATGTCAAAGAATGTCTCCAAAATCTTGTACCAAG
AGTCTCCTTGAATCTATAGAAATATGTTCTAAATGTGAACAATAGTTACA
CCCCTGTGTCACAGACCCGGTGGGATCCTTCCCCACTGGAAAACTTTGCC
AAAATTTCGTCCACTGTGGGAAAAATAACCTACAATTTCGATCCAACTGG
AAAATTGACTTTTAGTATAAATTTAATCTCCATTCAATGGAAAAAGTTGC
AATCCAAAAGTATCTCAATTAAATTTTTTACCTGAGAATGATTTCTATTG
ATTATTATTCAAAAAACATTTCAACAAATATTTTTCAGCATAAGCTTTTC
GTTTTATTAAAAAACATCATCAGTGCATATACAAGTAAAACGTTCAAAAT
AAAATGNACGGAAACAAACTTTTTGGGTAATTCGAACAGGTTTTCGGGTA
TGATCATATCATTCTGCTCTTTTTCATGAAAAATCTTAACAACACTTGCT
ACAAATCTTGAAGGGAAACCAGCTCTTTCAAACTTATCAACTACAATTTC
CTTTTCCATTGAAAAATCTGATGCAATATTCTTTGTTCGATGTAGGTCAA
CATTCACAGCATTTCGCTTGAACTTTTTGGGAATTTTTGATGACCAATGG
ACTGGAACCTTTTTATCACTCCGAAATACTGATGTGCTAATTTCGCCATT
TTCATACGTTAATTTGGTGTCAAGGGATTTTTCGGGTTTCACTTCAACTG
TGAACTTGATATTTGGATGATAGTTATTCAGACTCTCGAGAAGGGTATCC
GGTTCATCTTTATGTCGTTTGATTATTAAATCATCGACAAACCTTTTGTA
AAACTCTGGTTCGGTAGGGGTTATGACATCTTTTTCCAACTTTGTCATGT
AAATGTATCGAAAGTAACTGACAATGGACCACCCATAGTGCAGCCATCGA
TCTGTTTGTAAAATTTGTCGTTGAACATAAAAAGACTATCAGTGGATAAT
TTTAGAAGTAAACGCTTGAAAACTGTTTTTGAAGCAATTGGTTTGAATTT
CTTTCTATTGTAGATTTTGTCAATAATATAATCGATAGTTGGACGTACCG
GAACATTTGTAAATAGACTTTCAACATCGTACGAAACAAACTCCTCCGAA
TCATTCAATCGCGGTAAATTTCTTATCATTGAAGGGAATTTTTGAGTGTT
TTTGATCACGTAGTCATTTTCGTCAACCAAAGGTTTTAAGTAGTTTGCGA
TAACTTGAGACGCGTTGTATGTTGCAGTACCAACTTGAGCGATAATAGGA
CGAAACTTCAAGTCGTTTACGTTGATTTCCGTATTGCTTTTGAACTGGTT
GATTTGATGACGGTATCATGTCTTTATATTTTTCAAACTTTTTGAAATTT
CTGTAGAGGAAACTTTTGAATTTTTTGAGGTCTTCCATGGTAGTATCAGT
TGAATTTTTGTAAACACCTTTTGTGATTCCTTCATCGACCATACTTTGAA
GTNTTTTCTCAAACTTTTAAAAAAAGTTTGTCATAACCCCTACCGAACCA
GAGTTTTACAAAAGGTTTGTCGATGATTCAATAACCAAACGACATAAAGA
TGAACCGGATACCCTTCTCGAGAGTCTGAATAACTATCACCCAAATATCA
AGTTCACAGTTGAAGTGAAACCCGAAAAATNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTATA
TGCACTGATGATGTTTTTTAATAAAACGAAAAGCTTATGCTGAAAAATAT
TTGTTGAAATGTTTTTTGAATAATAATTAATTTTCTGGCTATATTTTTTT
ACAACAACGATTTCTATTGACTGAAAGCTATTTTGATGATCAAGAAGTGT
TACTGGTAACAGATAAATTTATAGGTCATTGCGTTATGGATTGTATCTAG
TCCGTATAAAACACCCTGGTCTGGAAGGCTATTGTTGTAACTTTTTGTTA
ACATTTCCCTTTGTTTAATAACGATTATAAAAATCGATTTGCTCAGTTTT
TGATCACGTTACCAAATACTCCTCCTGAGATTGGTTCAAAAGTTGATCAC
ATGATCAGAAAATGAGCAAACCAAACTAATTTATCAACGCAAGTTCAAAT
TCGAAACAATAGAAAGAACCAAAAGGCTTCCAAACCGGGGTTTCTTATAC
GGACTATGATCTAGCATTCATGTTTTCGTTTCAGACCCAAAGAATACGAC
GCCGCCAACGACGACGGCGACAACAAAGAAAATACCAAGGAACAGTCGTT
TAGGCGGTAAATCTATGTAGTTTTGTAGTTTTCGTCCATTGAGTTTAAAG
CCCGAAGGGCTAGAGTAGAANGGTAAATCTATGTAGTTTTCGTCCATTGA
GTTTAAAGCCTGAAGGGCTAGAGTAGAATCTCTAAACCTTTCCGAGGCAA
GAAAAAGTGAAGCCACTTACTTCCCATCCAGGAGTCTCGAGTCTAGCCCT
TCGGGCTTGGAAGTGAATGTTTTCGCCATCATGGAAGTAAATGTTCGAAT
CTGTACGCAAATCGAACGTTTGCTTCCATAATGGCGAAATCACGAAACTT
AACAAAACATAAAAAAACATTGACACTTATCAAGCCTTTTAAGGACGCGG
AAAGATTTTCTAAAAACAAATTGAAGAATCTTGATTTCTTTTTCTCTTTT
TTGGTTGGAAAAAATAGTCCACCTAAAGCTTTTTGATAGACTGGATGGTA
CGATCATTTGGCCCCTTCTTGGTATATGATAGCTTTCAATTTTTGTTTTT
TTGCCTCTACAATCAGTGCCATAACATGTTGGCACTTTTGGCTAATTTAC
CATTTTTGGAAAATTGAAGTTCGAGCGAGAATGTAAATTTCAGGCCTTAA
ACTTGATTTCATCGATTATTTCGATCTGGGAGGGATTTATTGGTTTCTAG
GCTATATTTCAAGCCCTACTGGACCATTTTTGAACTTTTGGATCCTTAGA
TCCTAAGGTCCTAAGTTTTAAGTCTAGCGTTAAAACTCAGAGTTAAAACT
CTACCTTTCGAACCTACTTTAGAGCACTTATAAATCGATTGTGGTTTCAA
AACTTCCCAGTGGATTTCCCTTTTGTGCCATGTATTTTGTCACTGATTGT
AGTTGTTTTTGAAAGGTAACAAGGGGGTGAAGGGACCTTTTTGTTTGAAA
ATAAGGAATTGCAAATTTTATTTATCAACTTCGAGCACTTTTTTTGTTAC
TTTGGATTTGTGCGTTTTTTGTTTTCCAAAATGGTGATCTCACCAAGTCT
AAGTCTACTTAAACTTGACTCGGCGTCATCAAAAAATATCAATAAGCAAA
TTTCAGCCTGAAGTAGACTCCAGTAGAAAGGAAAATGGAGGTCGAAACTA
GTAACCGAGGAGCATTTTGATGCCCCTAACATTTCGCTTCCCTCACAAAA
AAGCTACTAGACCCTACAGTTGACTTTCTCTAATTCGATCTTCGCTGGAC
CAAAAATTCTCTTCCAATTACAAAGAGATTCGAATTATAGAGAGTATTTT
AGGTGGCTTGCTCATTGACGGGTTCTGAGAATTAGTTTGAATTAGAGAAA
GATTCGAATATGAGAAGTTCGAATAAACTGTCACCCACCATGACTGGGCA
ACAAAAAAAATGTTCACCCTCTAAATGTTCAAAATAGATGCCACTTTAAT
GGACTAAAATATTCTAACTTGATTTTGACTTGTTAGAATCATTGCATTAA
TATTTTCAATCTTTTGTACCGTCATTTCTCCATTTTAGAAGATTGAGTTT
GAAAAATCAATTTGAAATTGAGTTTTTGCCACCGAATAACGGTGGTAAAA
AAGTGCTTGAAAAATACCCTGGGTTACTGTATTCTATTTGTAGGACCACA
TTCGCATGATTACAGGCGGTTCGTTTGTTTTTGGTGTGACCGGCGCTTTA
CAATCTACAGCATGTTTAAAGTTCACGTCGCCTCTCATCTGGAGGCGGTC
AGGGTGCCATGTACAATATGTTCTAAATCATTTACGACAAAGAGTTCCTT
GAAAGACCATATGCGAACTCACACAGGTAAATACATCACTTTGTTCTTAT
AAAAAAATGTACTTTATTTTTTATTTACAGTGCCTCAAAATCAATACCAT
GACTACCGGAGGCGATTTATATGTTATTGGTGTGATCGCCGCTTCCCACA
TTTCAGTGCGTTGAAAGCACATATTTCGGCCCATTTGGAGAGCGCTAGAA
AGTTATGTACCATTTGTAATAAAACATTCAGCAAAAAGAGTTCACTGGAA
GAACACATCAGAACTCATACGGGTAATAACCACTGACCTTTATATACCCC
TGGACCAAGTTATATCCGCCATCAATTTTTTGAATTGGTACCCGTAAAGA
AGCCATTGCAGTGTTCAAAATGAACGTTTAACGGCGCTACATCATCAAAA
GTATTCCAGGAAAAATAAATCTAGCGCTCTCAATTCATTTACACCGCTAT
TGAGTAGTGCCACCATTAGGGTACCACTTTTCAAAAAACTCCGATCAAAG
ATTTTTCTTGGCCGGGATTGAGAAGCTTGGTCCAGGGTTTATTAAAGGTC
AGTGATAATAACACTGATCTCTTTCGTAGGGGATCTCTACATATATTTTC
TAATCTACTACCCATGTATGTTGAATATAAAATAATATAATAGACCTTTT
CATAAAATAACAGCACGAACAACATCTGCCTCGTTTTCAAACAATCACCA
AGATGATCATATCTTATGCGGCCTAAAATGACACATCTTTCAATGAAGTC
GAGTTTTGATGAACTCCATTTGGTATTAAAAAGGGGCCAGTAGAAGTTCA
CAATGTAATTTATGAAAAGGCCCATTAAAGTCCTCCTGCAGATTCAACAG
TGATATAGTGGAATCCATCTGATAAAAATTGTTCCTCTTATTTTATTTCA
GGTGAGCGACCATACAAATGCAACCAGTGTGGAAAAACGTTCGTTACATC
AGGAAAGCTGACATCACATTTGAAAATACACGCCGGCATTTACGCCCATC
ACTGCCAATTGTGTGGAAAGAAATTCCGCGAACAGTAAGTTGTAGTCATC
GTCATATTCCTTTAGAAGAGGAAAATATAGAAAACTCTGAACTAGAAAAA
TATATCCCATTTTGTACGAGTAAAAGTGTGATAACTGGTTTATCGTCAAC
TTGAAAAATATTAAAAAACTTTTCTGGGGCCTGGACTTCCCGAGTTATTT
TTTTCCGAGTTATTTTTCATGTGACCTCATAAATCACAAAATATGGTAAG
TTTTGTTTTCTAGCTTTTAACTTTTCGAGTTATTTGGTGTTTTTTAACTC
AGTTTTTTTTTCGTGCCTTTAACTTTTTGAGTTATTAGATAAATTTTAAC
TAGGGTTTTTTTCTTGGCCTCGATTTATGGAAAATTCGACTATGGGTTTG
TTTCGTGAAGGGACAGATTTGTGTTAAATATATCAACAAAAAACTCGAAA
AGTTAGAACAAAACCGAGTATGCGTATTGGAAGTGAAAAGAAAAGGAGAT
TGTACAAAAATTTTATTTCTCGCTTACCAGACCCCTTTTTTGAACGAGGT
CTTGTTTTTTTACCGCATATGAAAATGCACGAGAGGCGTGCTCAAGAGGA
GAAGGAACCTAAAAAGTGTATTTTACTTCATAGCTACAATTTGAAGATGC
ATATGAAAATGCACGAGAGGCGTGCTCAAGAGGAGAAGGAACCTAAAAAA
ACAAAGATGTGGAACTGTAAGGAATGCGAGGCGGGTTTCACGCGCAAAGA
AGACTTGAATTCTCACAAGAAGGAAGATCATAAAACACCACATCAACTCA
TGTTAGAAGAACGCAAACTAAAGAGAAAAGCTGAAGAAAAAGAAAAAGCA
GGTATCTAGTCTAGGCTAGTTTTTTTTTTTCTTTAAACAGACCTGATTTA
CAGTTTACGCTCTTTAATTTGATTTTCAAGGGGAATAGCATTTTCATCGA
ATAAGGGTAAGGGAGGGTATTGAAGTGTAGAGCTTTGTCTGTAAGAGTTT
CTTGTTGACGGTGACTTTCAATATGATCGAATAAGGGAGCGTATCGAATA
GTAGAGCGTCGTTTATGAGAGTTTCTTGTTGACGGTGACTTTCAATATGA
TCGAATAAAAGAGCGTATTGAATAGTGCAACGTCGAATTAGAGAGCGTCG
ATCGTCGTTGACGGGGGGGGGGGGGTCCAAAANTCCTTCACTCTGTTTTA
AAAAGGGTTGTACGCGCTCCAGAACTCTCACGTCCCTTCACTCTGTTTTA
AAAAGGGTTGTACGCGCTCCAGAACTCTCACGTTCCTTCACTCAGTTTTA
AAAAGGGTTGTACGCGCTCCAGAACTCTCACGTTCCTTCACTCTGTTTTA
AAAAGGGTTGTACGCGCTTCAGAACTCTCACGTTCCTTCACTCTGTTTTA
AAAAGGGTTGTACGCGCTCCAGAACTCTCACGTTCCTTCACTCTGTTTTA
AAAAGGGTTGTACGCGCTCCAGAACTCTCACGTTCCTTCACTCAGTTTAC
AAAGCAAAGAGAGAGACAAAAGTCAACAATCGTGTACAAAATGAACAGTA
AATCTTTCATTATTCGTTGAGCTCGGTAAATATGTTGATCTATTATTATT
CTCTGATTATGTTTTTCTTCTCTTTGCATTCATAGTAAATGAGGATGGTG
TATCAGCCGCCAAGAAACGAACTTTGAGAACAACCGGCTTCACCCAAAAA
GAAGGTCAGTTTGCCCGTCATAATAGTATTGATTCTCATTTTTTTTAAGA
GATAAAATAAACTCTTGGATGGAAGATGAAGCCATTTATTCCCTATTTGA
CTGGTTTTCACAAAAACACCGGATTGAAAATAAAATATGTCGCCATATTT
CAAAAATAGGAAAACTAAGAAAGCGCGTCGTTTTTAATCTGTCATTCTAA
ATAAGGCGTATATCTTATGTTTTTACTTTTTCTTGCTTGAGAAAGAGTTA
AGATTCCAATCTACCCCATTAAACTCTATGATTGCTTCGGCCCACTGTAA
GATTATAATAAGGTCCTCCAAATAAACGAAATCTGCGTGGAAAAGATGCT
ACTAAGCTCAGCTACGGGGGGGGGGGGGGGGGAAAAAGGGGGGGGGGGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAACAGTAAATCTTTCATTATTCGTTGAGCTCGGTAAATATGTTGATC
TATTATTAGTCTCTGATTATGTTTTTCTTCTCTTTGCATTCATAGTAAAT
GAGGATGGTGTATCAGCCGCCAAGAAACGAACATTGAGAACAACCGGCTT
CACCCAAAAAGAAGGTCAGTTTGCCCGTCGGTAGGCAAAAATGGGTGCTG
GGTATGTGCGGACGATAAGGGTCGGTTTTTTTACCTTCCAAAGTCTCTCT
AAGGTTTACAAAAACCAGAAAATTTCAAAGTAATCCCTCTAAGGGTCGGA
AAATTAACTATTTTTAGGAAACTTTTTGATGAGAGAAAAAATTGTAAGAA
AGTCTCCCTAAGGGTAAGACATTTTTCCAAAAAGTCTCTTCAGGCACTTT
TTCGATAGAAATTAGAAACTAGTTCTATCTAAGGGTCGGTTTTCGGAGGT
CCCGTCGGCACATATTCCTCATCCGCCAACCCTAGTACCCCCCCCCTTTA
AACAAACAACACAACACAAACACATCTCAGATTATCCAAATTCTCCAAAT
TTCCGAATCTCTTTTATAGATGGCACATATGTTTGCGATTTATGTCAAAA
AGAATTCGTAAAGAAGGATTACCTGAACCGTCATTTAAGACGTCACGAAT
CAAGCACCGCTACGGATTGCGGAGAATGCGGGAAGACGTACCGAGATAAA
CCAACTATGCGACAACACATGGTTGATGCGCACGGAAGCGAAGCGAAACA
CTATTGCAATATATGTAAGCAAGGCTTTGTTATTTTGTCAACCTTACAAC
GTCACATGCGGATCCATCTCGATTCACGTCCGTTTACTTGCGATCAATGT
CCGGGTACTTACAAATCGAAAGAGGATTTAAGGCGCCATAAGCGGACCCA
CGAGGCCGACCGCCCGTACAAATGCGATATTTGTCATAATGGATTTGTTG
ATAAATCAGGGCTGAACCGTCATATGCGGATTCATACCGGTGAAAAACCA
TTCACGTGTCCGGATTGCGGGCAGTCGTTTACTCAATGTGGAACCATGAA
ACTCCACCGTGCTAAGAGACATCCCAATAGCACTATCGAGCTTACGGACC
TTCGTTCCGGTGCACGAATTGCCGCCGAGATGACGACGAAAACCGCCACT
GATGAAGACACTCCGAAAATTCCCGAAAAATCTGACCCTGATGAAGAAGT
CACAGAGTCGGAAGACGAAACTGCTCCTACCACGGAAAACTCCAAGTTTA
GTACGGTTCAAGAACTCTTGAATTGGATTGGTCAAAATCAGAATTCAGAA
CAGAATACGTCATACGAAATGTAGTGTGACTTGATTCTGAAAAGGTACAA
CAACTGTGTATTGTTTAGATTCAGANTTCATACGAAATGTAGTGAGACTT
GATTCTGAAAAGGTACAATAATTGTGTATGGTTTAGATTCAGAGATTACC
AATTTCCCATCATTTTTCCATTTTGTGCAGACGAACGATTGAATGAGCTT
GATACTCTGGAAATGACTCGGAAAATGTTTTTCGAGGAATGAGACATTTT
CATTCGTATGTGTATCAGATATTCTCTCTACATTTTTTAGGCGTACAAAC
TTTCGCTAGGTCGAGAAATCGCGAAATTTACGAAAATTTATTTTCGTGAA
TTGGGCGAAAAATGTTCTTTCAATCAAGAAAAGTTTCACACGAAAAAATG
GCTTAGAGTGACAAACATTTCTTGAATTGAAAGTAAAACTTCCTTATTAT
GAGGATTAAGCAGGTTAAAGAGCGCCATAAATGTTACATTTTATTTTAAG
TTAGAAGTTTATAGATTTTCTATTTTGTTTAGATATTTCGCGAGCATCAT
AAACTTTTGCGAATGGCCTTTTAAGAATTTTAGAGACATTTACTTTCGCG
AAAAGAGCTAAAATTCGCGAAAATTGCGAAAGTTTCTGTTCGCGAAAGTT
TGTACGTACGCCTGAAGTAAGCCCAACGACCATATTTCATACAGAAAATA
TTCATCTTTCTTGATGTATGATAAAGTCTTTTACTATGTTATCAAATCAG
GTGTCAGTAAAATTACAAAGACGCGAATAACCATTGATACAGTTTGGTAA
GATGGCGATCAAATTCGAAATTGAAGAAGATGTTATTAATGACGGCTTCT
TTGAAAAGGACTAGTAAATTGTCTAAACTTTCATAGGTACTTTTTATTGA
TTTATTTGTAATGATTAGTTACATGTTTGGACCAAAAAGGACGGTGGCCC
ATAATGCTCACGGCGTACTTCCAGTTCTGACACACCTCTAGGCTGCTGGC
ATCCACTAACGGATTCGTGTTCCTTATACCTGGGGTTTTGTAGAGGTCTG
CGATTCAGACTAACACACTTCCAGTTCACAAATTTTACAAGTGCTGGAAG
TGTCTTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009742-exon-sc0000098-1575043694:432471..432501 | TCONS_00009742-exon-sc0000098-1575043694:432471..432501 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1575043694:428496..428567 | TCONS_00009742-exon-sc0000098-1575043694:428496..428567 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1575043694:426480..426671 | TCONS_00009742-exon-sc0000098-1575043694:426480..426671 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1575043694:425718..425850 | TCONS_00009742-exon-sc0000098-1575043694:425718..425850 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1575043694:424901..425118 | TCONS_00009742-exon-sc0000098-1575043694:424901..425118 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1575043694:422688..422756 | TCONS_00009742-exon-sc0000098-1575043694:422688..422756 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1575043694:420442..422282 | TCONS_00009742-exon-sc0000098-1575043694:420442..422282 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1510915933:432471..432501 | TCONS_00009742-exon-sc0000098-1510915933:432471..432501 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1510915933:428496..428567 | TCONS_00009742-exon-sc0000098-1510915933:428496..428567 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1510915933:426480..426671 | TCONS_00009742-exon-sc0000098-1510915933:426480..426671 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1510915933:425718..425850 | TCONS_00009742-exon-sc0000098-1510915933:425718..425850 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1510915933:424901..425118 | TCONS_00009742-exon-sc0000098-1510915933:424901..425118 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1510915933:422688..422756 | TCONS_00009742-exon-sc0000098-1510915933:422688..422756 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1510915933:420442..422282 | TCONS_00009742-exon-sc0000098-1510915933:420442..422282 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1491911889:432471..432501 | TCONS_00009742-exon-sc0000098-1491911889:432471..432501 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1491911889:428496..428567 | TCONS_00009742-exon-sc0000098-1491911889:428496..428567 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1491911889:426480..426671 | TCONS_00009742-exon-sc0000098-1491911889:426480..426671 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1491911889:425718..425850 | TCONS_00009742-exon-sc0000098-1491911889:425718..425850 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1491911889:424901..425118 | TCONS_00009742-exon-sc0000098-1491911889:424901..425118 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1491911889:422688..422756 | TCONS_00009742-exon-sc0000098-1491911889:422688..422756 | Clytia hemisphaerica | exon |
| TCONS_00009742-exon-sc0000098-1491911889:420442..422282 | TCONS_00009742-exon-sc0000098-1491911889:420442..422282 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098 | supercontig | sc0000098:420442..432501 - |
Blast
BLAST of TCONS_00009742 vs. Swiss-Prot (Human)
Match: ZN112 (Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=1 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 1.170e-56 Identity = 120/373 (32.17%), Postives = 181/373 (48.53%), Query Frame = 1
Query: 91 SRLGVPQNQYHDYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREHYNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKK-EDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCDICHNGFVDKSGLNRHMRIHTGEKPFTCPDCGQSFTQCGTMKLHR 1206
S L V Q + H + + C CD+ F S L+AH H C C K FS+ S L+ H R HTGE+PYKC +CGK F S L H ++H G C+ CGK F +NL++H ++H K + C+EC GF++ L +H++ + P+Q +E G S +++ L++ + Y+C++C K F ++ YL H R H C CGK + + H H + C +C +GF S LQ H R+H++ RP+ C+QC + L+ H R H ++PYKC++C GF +S L H R+HTGEKP+ C CG+ F + +H+
Sbjct: 538 SVLNVHQ-RVHTGEKPYKCEECDKGFSRSSYLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQRVHTGEKPYKCEECGKGFSRSSHLQGHQRVHTGEKPFKCEECGKGFSWSFNLQIHQRVH----------TGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQ------------------CDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVHTRVKPYKCEMCGKGFSQSSRLEAHR-RVHTGGKPYKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCGKGFSGYSSLQAHHRVHTGEKPYKCEVCGKGFSQRSNLQAHQRVHTGEKPYKCDACGKGFRWSSGLLIHQ 880 HSP 2 Score: 138.658 bits (348), Expect = 1.707e-33 Identity = 90/318 (28.30%), Postives = 134/318 (42.14%), Query Frame = 1
Query: 121 HDYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREHYNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKKEDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCD 1074
H + F C C + F L+ H H C C K FSK S+L H R HTGE+PY+C++CGK+F L SH +H+G + C++CGK F + L+ H ++H R K + C+ C GF++ L +H R + T G Y C++C K F + L H R H C +CGK + +++ H H E + C +C +GF S LQ H R+H +P+ CD C ++ L H+R H +D+ YK +
Sbjct: 631 HTGEKPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQCDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVHTR----------VKPYKCEMCGKGFSQSSRLEAH---------------------------------------RRVHTGG------KPYKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCGKGFSGYSSLQAHH-RVHTGEKPYKCEVCGKGFSQRSNLQAHQRVHTGEKPYKCDACGKGFRWSSGLLIHQRVHSSDKFYKSE 892 HSP 3 Score: 136.732 bits (343), Expect = 8.135e-33 Identity = 103/365 (28.22%), Postives = 148/365 (40.55%), Query Frame = 1
Query: 124 DYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREH---YNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKKEDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCDICHNGFVDKSGLNRHMRIHTGEKPFTCPDCGQSFTQCGTMKLHRA 1209
+Y + FIC S L H+E C FS S ++ HT E+PYK C +F + L H KIH G K +EH +N +K H+R +K + C C GF + LN H++ V +K Y C+ C K F + YL H R H C ECGK + ++ H H E + C C +GF S LQ H R+H +PF C++C + +L+ H+R H ++PYKC+ C GF S L H R+HTGEKP+ C +CG+SF+Q ++ H++
Sbjct: 419 EYGKSFICS---------SNLDIQHRVHMEENSYNSEECGNGFSLASHFQDLQIVHTKEQPYKRYVCSNSFSHNLYLQGHPKIHIG---------EKPRKEHGNGFNWSSKLKDHQRVHTGQKP------YKCNICGKGFNHRSVLNVHQR-------------------------------VHTGEK--------------PYKCEECDKGFSRSSYLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQ-RVHTGEKPYKCEECGKGFSRSSHLQGHQRVHTGEKPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQCDECGKSFSQRSYLQSHQS 713
The following BLAST results are available for this feature:
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