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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009713 ID=TCONS_00009713|Name=TCONS_00009713|organism=Clytia hemisphaerica|type=transcript|length=919bp
ataaaataaaagaaccGAAATTTAAACGAATTATAAAAATGcataattaa
aattttctaaaattttacaaaaaatgagaATGTTTACATacgtaaaaaga
aaaaataagtttagaGCGGTTTAGATAAAAATGAAAGGTGGATTGTTTCC
TGGGTTAATCTCATAGGTTCAGGTTCAAACTTGATTTCAAGTGAGACGGC
GCAAAAAATCCCCTAAATTCAAAAGTATGATGTTTCAATCAAAGTTTAAA
CGATTCAAAtaatatcaaagaaaaaaaatataattgttttccctaaaata
ttgtttgaaatatattcataacaaaagttttttattttccaaaaatacat
atattttcttatttatataatcgaattttgcataaattaaagaaatggat
ttaaattaaagaaatcgTCGACCTTGTTGATAGTTTTATGGTGTAAGGAA
AAATATACGAATTGCAGTCTGTAAAAACACAGAAGATGTCTTAGATCGAC
CTGAGAGAACAGCACATGGAAGTTGATAAAATCTTCCAATTCTTCATAAC
AGAATTTAAATGTGTAGTTTCATTACAGACAGAAAAAAGCGTTTAAATGA
TTTCAACAATTAGTACTAGCTTGTGCACGGATGCGCTCAAAGATAGCATA
TTCCTCGGCTGATAAATCACAACTTTTGAATGGGCCATCCATCATCCCAC
ACAGGAAACTTCGACGACATTTCAACGTGTCACATGTATCATATTTGTAT
TGTTTTCGGTATGCCCTGCAAAAGATAGAATATAAAACTAGGTCAGTGTA
GAAATCACAATGGAACAACCGCCGGCAAAAAAATTACCGTAGCAACGCTA
CCATTTTAAATAGATAAGACTTgattattcattttgaaatgaaaatatgt
atacggTGAGTACTAAATT Run BLAST on NCBI transcript from alignment at sc0000098:385785..386766+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009713 ID=TCONS_00009713|Name=TCONS_00009713|organism=Clytia hemisphaerica|type=transcript|length=982bp|location=Sequence derived from alignment at sc0000098:385785..386766+ (Clytia hemisphaerica)
ataaaataaaagaaccGAAATTTAAACGAATTATAAAAATGcataattaa
aattttctaaaattttacaaaaaatgagaATGTTTACATacgtaaaaaga
aaaaataagtttagaGCGGTTTAGATAAAAATGAAAGGTGGATTGTTTCC
TGGGTTAATCTCATAGGTTCAGGTTCAAACTTGATTTCAAGTGAGACGGC
GCAAAAAATCCCCTAAATTCAAAAGTATGATGTTTCAATCAAAGTTTAAA
CGATTCAAAtaatatcaaagaaaaaaaatataattgttttccctaaaata
ttgtttgaaatatattcataacaaaagttttttattttccaaaaatacat
atattttcttatttatataatcgaattttgcataaattaaagaaatggat
ttaaattaaagaaatcgTCGACCTTGTTGATAGTTTTATGGTGTAAGGAA
AAATATACGAATTGCAGTCTGTAAAAACACAGAAGATGTCTTAGATCGAC
CTGAGAGAACAGCACATGGAAGTTGATAAAATCTTCCAATTCTTCATAAC
AGAATTTAAATGTGTAGTTTCATTACAGACAGAAAAAAGCGTTTAAATGA
TTTCAACAATTAGTACTAGCTTGTGCACGGATGCGCTCAAAGATAGCATA
TTCCTCGGCTGATAAATCACAACTTTTGAATGGGCCATCCATCATCCCAC
ATAAGAAGCTTCGTCGGCATTTCAACGTGTCACATGTATCANATGGGCCA
TCCATCATCCCACACAGGAAACTTCGACGACATTTCAACGTGTCACATGT
ATCATATTTGTATTGTTTTCGGTATGCCCTGCAAAAGATAGAATATAAAA
CTAGGTCAGTGTAGAAATCACAATGGAACAACCGCCGGCAAAAAAATTAC
CGTAGCAACGCTACCATTTTAAATAGATAAGACTTgattattcattttga
aatgaaaatatgtatacggTGAGTACTAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009713-exon-sc0000098-1491911889:385785..386484 | TCONS_00009713-exon-sc0000098-1491911889:385785..386484 | Clytia hemisphaerica | exon |
| TCONS_00009713-exon-sc0000098-1510915933:385785..386484 | TCONS_00009713-exon-sc0000098-1510915933:385785..386484 | Clytia hemisphaerica | exon |
| TCONS_00009713-exon-sc0000098-1575043694:385785..386484 | TCONS_00009713-exon-sc0000098-1575043694:385785..386484 | Clytia hemisphaerica | exon |
| TCONS_00009713-exon-sc0000098-1491911889:386548..386766 | TCONS_00009713-exon-sc0000098-1491911889:386548..386766 | Clytia hemisphaerica | exon |
| TCONS_00009713-exon-sc0000098-1510915933:386548..386766 | TCONS_00009713-exon-sc0000098-1510915933:386548..386766 | Clytia hemisphaerica | exon |
| TCONS_00009713-exon-sc0000098-1575043694:386548..386766 | TCONS_00009713-exon-sc0000098-1575043694:386548..386766 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098 | supercontig | sc0000098:385785..386766 + |
Blast
The following BLAST results are available for this feature:
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