TCONS_00009677 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009677
Unique NameTCONS_00009677
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length451

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009677 ID=TCONS_00009677|Name=TCONS_00009677|organism=Clytia hemisphaerica|type=transcript|length=451bp
ATGTCAAGGTAGTCGAAAATTTGTTGTAAAGTTTCtaaatcaaagttttt
gaaCGTATCATCTCATTCCAAACAAACGTGTTCGGGTCACCGAGTTCCTC
CGAGCCCGCAGAGAAAAATTGAACCGAGCAAAATAGTCGTTAGTCGTCAC
AGTTTGTCGTTGCCGAAGACTAGGCGCCTGTGTTACTGTTTTGTCTAAGA
CTACACAGCATGGTATGAGAATGGTTGGTTATTTTCTCAAAGTTTTCTCT
TGCGACCTCTCAATGGTGTGAATTCATACGTATTATTATGGAAGGTTGTT
TTGTTTGGACGATCGCCCAATCGTGGTTTGCCGTTATTCTTAATTCCGAT
CTGCCAGGTTTTATGCATTACTGATGTAAAAATGGTTCGTTTTGTTTTTT
CGCCAAATGTTTCTCTGAAGATACAGTTGATATCGTTGCCATTAGCctgt
a
Run BLAST on NCBI

transcript from alignment at sc0000097:605276..605726

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009677 ID=TCONS_00009677|Name=TCONS_00009677|organism=Clytia hemisphaerica|type=transcript|length=451bp|location=Sequence derived from alignment at sc0000097:605276..605726 (Clytia hemisphaerica)
tacagGCTAATGGCAACGATATCAACTGTATCTTCAGAGAAACATTTGGC
GAAAAAACAAAACGAACCATTTTTACATCAGTAATGCATAAAACCTGGCA
GATCGGAATTAAGAATAACGGCAAACCACGATTGGGCGATCGTCCAAACA
AAACAACCTTCCATAATAATACGTATGAATTCACACCATTGAGAGGTCGC
AAGAGAAAACTTTGAGAAAATAACCAACCATTCTCATACCATGCTGTGTA
GTCTTAGACAAAACAGTAACACAGGCGCCTAGTCTTCGGCAACGACAAAC
TGTGACGACTAACGACTATTTTGCTCGGTTCAATTTTTCTCTGCGGGCTC
GGAGGAACTCGGTGACCCGAACACGTTTGTTTGGAATGAGATGATACGtt
caaaaactttgatttaGAAACTTTACAACAAATTTTCGACTACCTTGACA
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005413XLOC_005413Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009677-exon-sc0000097-1491911889:605276..605726TCONS_00009677-exon-sc0000097-1491911889:605276..605726Clytia hemisphaericaexon
TCONS_00009677-exon-sc0000097-1510915933:605276..605726TCONS_00009677-exon-sc0000097-1510915933:605276..605726Clytia hemisphaericaexon
TCONS_00009677-exon-sc0000097-1575043694:605276..605726TCONS_00009677-exon-sc0000097-1575043694:605276..605726Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097supercontigsc0000097:605276..605726 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0.882265	0.123539	1.07116	0.148528	0.683454	5.75253	3.13891	34.7967	15.723	1.32064	4.96327	0	1.14154	2.83487	1.45189	1.849	3.36203	1.1018	2.24762	2.41225	0.42907	0.976302	0.497349
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009677 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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