TCONS_00009651 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009651
Unique NameTCONS_00009651
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length346

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009651 ID=TCONS_00009651|Name=TCONS_00009651|organism=Clytia hemisphaerica|type=transcript|length=346bp
ACACGACTCTCTGGCCTCTTTCCTCAGTAGAAACAAAAGTGTGTCTGTAA
AAGATTACAAGTTGATCCTTCACTTCACAAAGGAGCTCTTAAAACAAGAG
TGGTTAAATATATACGATCCTACAGTTAAAAGTGTGTGTAAATATTATAT
CCTATGGTTAAAAACATTATCCTACAGTTAAAACATATCCTATGGTTAAA
AACATATCCTACGGTTAAAAATATATCCTATGGTTAAAAATATGTatgtt
taaaaatataaaatgtgTACCCATTTTTGGTTGAGCAACCTGTCAAAAAT
TTGTGGATGTACACatcttttttggatttttttctaagGATTTTAG
Run BLAST on NCBI

transcript from alignment at sc0000097:32334..32679

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009651 ID=TCONS_00009651|Name=TCONS_00009651|organism=Clytia hemisphaerica|type=transcript|length=346bp|location=Sequence derived from alignment at sc0000097:32334..32679 (Clytia hemisphaerica)
CTAAAATCcttagaaaaaaatccaaaaaagatGTGTACATCCACAAATTT
TTGACAGGTTGCTCAACCAAAAATGGGTAcacattttatatttttaaaca
tACATATTTTTAACCATAGGATATATTTTTAACCGTAGGATATGTTTTTA
ACCATAGGATATGTTTTAACTGTAGGATAATGTTTTTAACCATAGGATAT
AATATTTACACACACTTTTAACTGTAGGATCGTATATATTTAACCACTCT
TGTTTTAAGAGCTCCTTTGTGAAGTGAAGGATCAACTTGTAATCTTTTAC
AGACACACTTTTGTTTCTACTGAGGAAAGAGGCCAGAGAGTCGTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005387XLOC_005387Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009651-exon-sc0000097-1491911889:32334..32679TCONS_00009651-exon-sc0000097-1491911889:32334..32679Clytia hemisphaericaexon
TCONS_00009651-exon-sc0000097-1510915933:32334..32679TCONS_00009651-exon-sc0000097-1510915933:32334..32679Clytia hemisphaericaexon
TCONS_00009651-exon-sc0000097-1575043694:32334..32679TCONS_00009651-exon-sc0000097-1575043694:32334..32679Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097supercontigsc0000097:32334..32679 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.02808	0	0	0	24.9892	7.01998	3.25542	4.90544	1.23682	0.36088	0	1.41498	0.208428	0	0	0.600896	0.451043	0.398509	0.550562	0.951617	7.25438	6.37043	3.46481	3.9272	0	0.275143	7.09096	2.07105	1.92976	4.17738
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009651 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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