TCONS_00009526 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009526
Unique NameTCONS_00009526
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1470

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009526 ID=TCONS_00009526|Name=TCONS_00009526|organism=Clytia hemisphaerica|type=transcript|length=1470bp
ATTTGCTGGTTTGATTTCGGATAAAACAGTTCGTTGGTATGTTTCCAGAC
AAATAATAACAGGGATGGGAAATTTCCCAATTATTTTATAATGTTGGAAA
ATTCAACAAAGTGTGGATTGGATCAAGATGTTTTGGcttaaattgatttt
gctttCAGCTTGCTTTTTGCAATGCTTTTCATTCATTCGGCGCCACGCAT
GCAATGGGAATTTTCCAAAGAGAGATCCAATCAAATGTTACGGCAACCGA
CGAATAAACATCATCAGTGCCAAATATGGACGTTTTGGACCCAACCAAAA
GAAGATTTGTTTCGTGATTCCTCAACTtatcaaaatgaagacatgCCAAG
ATGACGTGACCGAAAAAATGCGTGAAATTTGTAACGGACAATCAGAATGT
AATCCGAATGCAATGAAAGATCAAATTTTGGATCCTAATCGTTGTGCTAA
ATGGAATAATTTACTTTTATCACGAAGATATTATTTTGAAGTGGATTTTG
AATGCAAAGAAGACCTCCAAATATGCAATGGTTGCAAAGACGGTCTCAAG
AAGGATGTTTCATGTACAAACGGTCGTAAAATTCACGTCAAATCTGCCAA
CATCATTATGGTCAGAGAAGGACAAGAATTTGAGGTTTCGAACTCCGACT
GCACGTACTCAGTGACCAAAAATTTGAGACATTTGAAGAATGGTAAAAGT
GAGACAACGTTTCATCAGCTTGAGCATATGTGGGGCGATTATGATCATGC
GGCGTATAGTGAACGTCAAACATGTGATATTTTCCATGGATTTAAAATGA
AGTATTGTTGTCAAAcATCAAGTGGAAGCTTAATTTCAGGAACATGCAAA
ACAATTTCTTACATTGAGAACATTGATTCTGCGAGACCCAGAGTTATATG
CCGACGTGGAAGTGCTAGATCAATGGGAAAAAGAAACCAAGCATTTACGG
TAGAAGGAAGTAAATGGCAGGAAACATACACCAATGTTAAAGAAATGGTT
TGCAATGTTGATGCAGATGCTGGTCAAACTtgcttttataagcaaccact
CTTGTTGGAATATACTTGTGAAGAACATTAAAAAATTTACGGAAAACTTC
CGCCATTGTGGAAGAAAAAGTTCAATTTGCAGATATCGCCACTTTGTCTT
TCTCAAGCCACGTTTTGCTTGAGTAAGAGACAGAGTAGTTCTATCTTGTG
TTTTGTATATAAGACATATGTGAAGGATTCGCCTTCAACAACACCAGAAC
ATCTACTTCCGAAATGGCGGATTTTCTCTTAGTTACGTAACTTTGGTAAA
AGCTGATAAAACATCCatattatttcaaatatttttttgttaagcATGCG
CTGActttagtttttttgttatgaCACAGTAAACATTTtgtaattatcac
ccaaaattaatttgaaaaaaaatgatatcATTGCTAAACAAAAAAGAATG
TCTCAAAATGAAAACTTAAC
Run BLAST on NCBI

protein sequence of TCONS_00009526-protein

>TCONS_00009526-protein ID=TCONS_00009526-protein|Name=TCONS_00009526-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
MFWLKLILLSACFLQCFSFIRRHACNGNFPKRDPIKCYGNRRINIISAKY
GRFGPNQKKICFVIPQLIKMKTCQDDVTEKMREICNGQSECNPNAMKDQI
LDPNRCAKWNNLLLSRRYYFEVDFECKEDLQICNGCKDGLKKDVSCTNGR
KIHVKSANIIMVREGQEFEVSNSDCTYSVTKNLRHLKNGKSETTFHQLEH
MWGDYDHAAYSERQTCDIFHGFKMKYCCQTSSGSLISGTCKTISYIENID
SARPRVICRRGSARSMGKRNQAFTVEGSKWQETYTNVKEMVCNVDADAGQ
TCFYKQPLLLEYTCEEH
Run BLAST on NCBI

transcript from alignment at sc0000095:425799..432916-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009526 ID=TCONS_00009526|Name=TCONS_00009526|organism=Clytia hemisphaerica|type=transcript|length=7118bp|location=Sequence derived from alignment at sc0000095:425799..432916- (Clytia hemisphaerica)
ATTTGCTGGTTTGATTTCGGATAAAACAGTTCGTTGGTATGTTTCCAGAC
AAATAATAACAGGGATGGGAAATTTCCCAATTATTTTATAATGGTATGTT
AAAAAGGCTTCAAACACTTCCGCAATTAATATTTTACTTGCAGATTTGTC
CGACGAAAAATTTAATATAAAAGAGACTAAAGTTTTAGCGATTCGATCAA
AATTAAACTTTCAGTTGGAAAATTCAACAAAGTGTGGATTGGATCAAGAT
GTTTTGGCTTAAATTGATTTTGCTTTCAGCTTGCTTTTTGCAATGCTTTT
CATTCAGTAAGTTTTGTATTTATTTTTCACTTAACATTGATATTTAGATT
TCTTTTGCTTAAAAAATAGAACCTTGCATACTCTCATTAAGCCCCCACCC
CCAGCGGCACCCTTAATCAAGTTATCACGCTAGATTTTTGCTTTCATCCC
GAACACAAAAATTGGTTCTGAGAGAGCCTCAATCACGCATCACGCCGAAA
TCTTGATCATGCAAAAAAAAGTCTCAATCACGCCATCACGAACACCACTG
GGGGACTCCCGATAAAGTTATACTTTGATACTCTTATTTACTAAATCTCG
AAAAAAGATATTCCATCAAGTCCCTTCATATGCTATAAACCTTTTCGTAT
TACCCTTTTTTTCAAAACTTTCGAAAATGTTAAGCGTAGCGCCTGCTACA
GACAGAAAAAGAGCACCTTCCTTGTTTTTTTTTCAAAGTTGAATTTTTTT
TTTCATTTTGAAGTCGGTCAAAATCATTCCATTTACATTCAATTCACATT
TACAAACTTGAATCTTTCTTAATCTTCCATCTAAATNATTTTGAAGTCGG
TCAAAATAATTCCACTTACATTCAATGCATTACATTTACAAACTTAACTC
TTTCTGTCCAAATTTAGTTCGGCGCCACGCATGCAATGGGAATTTTCCAA
AGAGAGATCCAATCAAATGTTACGGCAACCGACGAATAAACATCATCAGT
GCCAAATATGGACGTTTTGGACCCAACCAAAAGAAGATTTGTTTCGTGAT
TCCTCAACTTATCAAAATGAAGACATGCCAAGATGACGTGACCGAAAAAA
TGCGTGAAATTTGTAACGGACAATCAGAATGTAATCCGAATGCAATGAAA
GATCAAATTTTGGATCCTAATCGTTGTGCTAAATGGAATAATTTACTTTT
ATCACGAAGATATTATTTTGAAGTGGATTTTGAATGCAAAGAAGACCGTA
AGTTTCATTGAAAAATTAACCGTATAAAAATTCTAATCCAGAGGGTCAAT
CCAATATTCTACTTTCAGAAATCCTCATTATGACTAGCCATAACTTTCAT
TAAGGTGCCACCGCAGCAAAACGAACACATAGAGTTGAATTTGCGTTCAA
AAGGAATGATCTTAGCCCTACAGTAATTTTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGGCTAATTTTGATTGTTCAATTGTTTTACAAGTTTGTTTTGGACA
CGTGATTTTCATTGTTCTCTTTAATGACACGTGGTTCGCGCAGTGTTTAC
ATTTTACTACTGTAATGTCCCTTTAAGATTGACCTCTCATCTAAGACAAA
ATTCTTTCAAATGCTAACAAATGTGTCAAGGGAGTGATTTACAGTCTACT
TAGAGTGACATCCGTGCCTTGTCTTACACGTTTTTTATAAGAACAGTTTC
ATAAGAATACGAGGCTGAAATTTGGCCAAAACCTAAGAACAAATTTAGAA
CAATCTGTAGAACCTCAGATTTCATAAATTACTGAGAAGTACTCACATGT
TATTTTACTAGTGTACACGTTTAGCAACATAACTGTTCGATTACTTAGAG
TAGAGTAATATTTTTAACCTATGAAGAGCGCTTAATAATTACTTGTGANT
GATGGCGAGCGAAGCTAGCAAATTTTTTTTGGCTTTTTCGGATATTTCAC
CATTAAAGAAGGGGAAGAAGAAAATTCTAGTGGGAGGATTTTTTGAAAGA
AAATTCTACTGGGGTACGTTAAAATAAGGGCTTTTCGAGTGGGGTATGTG
TAAACTTTTTATCATTTTCAATGGGGTGTTTTTTACTACAACATTCCAGC
GGGGTGAGTGATTTGTCCAGTGGGGCTGAAAAATGAGCCATTTTTGGAAA
AACAAGCTGGATGCTGATAGGACCTACCTGTTAATTATGAAATATATGAA
AGATGACTCACCAGTATCACAGGATCTTGACCTTGTGTTGAATCAGAAGA
TGTTCCAACAGGGAAGATATGTTGATGCAGCACACTGGTAGGTGATCCAC
AATATATGCAAATGAACCAGCAGCAACAATCAATCAATAGAATAAAACAG
TAAGATGAACCAATATCAACAGGAACAAATGTCAACAGTCTATATCAAAT
AATAACAGAATCTGTCAGTTACAGCATTCCTGTTAATACAATATCAATAA
CAGGATCTGTCTTCCACAGCATCCACACATTGCACTATAATCAGGATCTG
TCTTCTACAGCATCTAAACAATTATGACCAAACAATCACCTCGACCATCA
CACATCTACTGGATCAGCACCAACGGCGATTCTACAGATTGATGATGTAT
TATTTATTTAATTAGTATTGTGTCTATAATGAAAGTAACATTACCTGATA
ATGAAAGTTAGACAAATGAGAGCAAATATAGTAATTAATGGAAAAGATCA
TGAAACGCAAACGAACAAACAAACGAACGAAAGAACTAATGAGGGAAGGA
GTGAATGAAAGAGCGAGGAACGAATGGAGCAAAAAATCATGAATGAAATA
TTGAGTAGAACTTGAGAAATTGAAGAAAAAATGTTTTTTTCTGGCACGAA
AATCAGCTGTTTTGGAAATTTTTAGAAAATATTGGGAATTACTATCAGCA
ATATTTCATGAAAAAAATATCACAATTAAGACCAAAGAAAATCTGGAAAA
ACAGCTATTTTTGGCATTTTCGGCCGGAAAAAAAATTTTCTCGAAAATCA
GACTCAACCATGTTTTGGGCATTTTTAATACACATCTTTTGGCATCAGTG
TGCAAAATTTCATGAAAAAATATAAAGTACAGCTCGAGAAATTTCAAGAA
ATACCATTTTTCTGGCGAAAATCGGCTGTTCTGGCGATTTTTAGAAAGTT
TTAGTTACAAAATTCAGTTTTATTGATAATTGAACCATGCTTGATAATGG
GCATTGTTACTAATAATGTTTTTGAGTGAAAAAATAAAGAAATATCTGTT
TATGAAAGTCAGATAGAAATAAGGAGAAAAGTGACAACAATCAGTCAGAA
AATATAGCGTTAGCGAAAGCGCAAAACGCATTAAATTTCATCATCGATTG
TTGATGGGAGAGAGGGAAGGGTAGTAGAGAACAAAAAAATGAGGCTAATA
AATGATAAATATCCACAAATCTACAAAATCTGCATTNTTCAGCCAGAATA
GAATTTTTCTCAAAAATCGGACTAATCCATGTTTTAGGCATTGCTAATAC
GCATCTTTGTGCAAAAAATCAGAAAAAATTAATGATGAAATCTCGAGAAA
ATGCCAAAAAACCGGTTGAATGAATTTTTTTCTAAAATCGGGCTCCGTCG
CATTTTGGGCATTACCATTTTGCATCTTTGTGCCAAAAATTAGGAAAAAC
TAATGAGCCAATCCCGAGAAAAGCTAGTAACGAACGGACGAACGGACGAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCGAACGAACGAACGAACGAACGAACGAACGAACGAACGAAC
GAACGAACGAACGAACGAACACGGGTTAATTTATAGGACCTCCAAAGGTA
GGTCCAATAAAACAATAGAGAGACCGTAAGATAAGAATGCTACCGTANTC
GAACTCCGACTGCACGTACTCAGTGACCAAAAATTTGAGACATTTGAAGA
ATGGTAAAAGTGAGACAACGTTTCATCAGCTTGAGCATATGTGGGGCGAT
TATGATCATGCGGCGTATAGTGAACGTCAAACATGTGATATTTTCCATGG
ATTTAAAATGAAGTATTGTTGTCAAAGTAAGTCATAGTTTCTCTGAATAA
ACAAAAACCCTTCCCGTCATACTCTTCGAGATCCTTTTCCCTTCCTCCAT
CTCTTTGAGTTCTCTATTCATTCACTTTCTACCATGACTCAATACATTCC
CTAAGNAACTAAAATACTGAAAAACGCGCGCAAAATTATGAGATGTTTGC
CCAACTTCCTTATGCGTGAAGCTATGAATGCCATCCTCAGAAGCTTTATG
CTTCCTCCGGTGGCAATGACTCGATTGTAATTAGAATATTTTCCTAGTGT
CTAATTATTGCGTGACCAGATAAAACTTCTCGTTTTGAAGATAATTTCTT
CTCAAAAGATTAAAGTCAGCGAGATTTGAAACGATATTTCGGTTCAACCG
TCCCCACGAATATAAAATTCTTGGAAAGGTTATGTTATTCACGGAATTAA
TTTTAAATTTAAAAGTGAAGTTCGGATATGTTTTCTACGGAAACTTCCCG
GTTTTTACCAGTAGTTGCAAATTAAAACAATTTTTCTCTAGCTTATATTG
TCAACTACTGGTAAAACCCGGGGGTGTTTCCCGGAGAAAATGTTACGTCA
TAAACATCATGAAAATCTTTGATAATATTATTTCTATATCGCTTTTAGTC
CAAATATGCAATGGTTGCAAAGACGGTCTCAAGAAGGATGTTTCATGTAC
AAACGGTCGTAAAATTCACGTCAAATCTGCCAACATCATTATGGTCAGAG
AAGGACAAGAATTTGAGGTTTCGAACTCCGACTGCACGTACTCAGTGACC
AAAAATTTGAGACATTTGAAGAATGGTAAAAGTGAGACAACGTTTCATCA
GCTTGAGCATATGTGGGGCGATTATGATCATGCGGCGTATAGTGAACGTC
AAACATGTGATATTTTCCATGGATTTAAAATGAAGTATTGTTGTCAAAGT
AAGTCATAGTTTCTCTGAATAAACAAAAACCCTACCCGTCATACTCTTCG
AGATCCTTTCTCCTTCCTCCATCTCTTTGAGTTCTCTATTCATTCACTTT
CTACCATGACTCAATACATTCCCTAGACTATGTTATAGTCTAAGACGAAT
CACGACTATCTAAGAAAAAAGCCCGAAGCCGAAGAAAATTCGCAAACAGA
TTTTTTTTACCGAAAAGAGTTTACAGTCGGTAGAGTTGCCAGACTTTCTT
CGAAACTCTCCCGCCGATTTTTTCCCCTATACCGCCATAACGCCATACCA
CCATATTTTCCCGCCTTTACTATCATTGTAACGGACGATAACATCGTCTA
TACGTTCCATCACCTCACATTTCTCCGTATTATGAAAATGATTTATGGGT
TATCCAACTTCATTATTATATTCCATCAATTTTTTGACGTGAGAGCCAAC
TTTTATAAACCAATCTTATTCTGTATAACATTAAATTTAATTGATTTCAA
TCGTCCATTTAACGTTAGATTGACGTTTAAAACAACGTTGTGTGCCAGCT
GGGATAACACTAGTAAGAACATTTTAAGCTCAAAACTGGCAAAAAAAATA
GCGCAACCGAGCCTAGATGACGCTATCGTCCATTTAGAGGGTCAGTAAAC
GGGAGAAAGTATATGCGCAGAGTCAGGGCGTCAGGGTGGTTTACGGAAAA
AATAGTGGCGGTAGAGTTTTGGAACACTGAAAACACCTCCGCCACTGTTT
ACTACGCCCCGAACTGAACTCCGTTTTCAAATTTATCCCGCCTCCTGAAT
TATTCCCTACAGAGCCCAGCCAGGAGTAAGACTTTAAAAAAAGTGTGTAG
TACGTTATTCAGATTTGATCTGGTTTGGAATACTTCACCTTGAAAAACTT
TTTTATTTATAGCATCAAGTGGAAGCTTAATTTCAGGAACATGCAAAACA
AGTAAGTCAGTTTTTTCAAAAAGATTTTTCTACCGAATGTTTCAAAAAAA
CCGTGTACAAAATTGAATGGTTTTTGAGTGGTTTACCCCTCGTGCCAAGT
TAGGGATATTGGGGCCTAAAGTTTTGTAATTTTACGAGGCTACCTGTTCT
TTGTGGGTAGTTAGCTGTTTTGATTGAGGCTCAACTGTATTTTCAAAGTT
GATGAATATTTTGCATTGTTAATAAATTTTTAACCTACTGTAAGAGCTCA
ATTTCTCGATTTCGTTTCTTTCATATTGGGATACCAAACTCAAAGCAATT
GCTCAAGAGGGCCTAAATCTCTGGGGGCACTTTACTTCAATGGGTGCACG
GAATGTGAGCTAAAACCATGAAGTGTAATTTTCATCTCACTGTATTTTTT
AGTTTCTTACATTGAGAACATTGATTCTGCGAGACCCAGAGTTATATGCC
GACGTGGAAGTGCTAGATCAATGGGAAAAAGAAACCAAGCATTTACGGTA
GAAGGAAGTAAATGGCAGGAAACATACACCAATGTTAAAGAAATGGTTTG
CAATGTTGATGCAGATGCTGGTCAAACTTGCTTTTATAAGCAACCACTCT
TGTTGGAATATACTTGTGAAGAACATTAAAAAATTTACGGAAAACTTCCG
CCATTGTGGAAGAAAAAGTTCAATTTGCAGATATCGCCACTTTGTCTTTC
TCAAGCCACGTTTTGCTTGAGTAAGAGACAGAGTAGTTCTATCTTGTGTT
TTGTATATAAGACATATGTGAAGGATTCGCCTTCAACAACACCAGAACAT
CTACTTCCGAAATGGCGGATTTTCTCTTAGTTACGTAACTTTGGTAAAAG
CTGATAAAACATCCATATTATTTCAAATATTTTTTTGTTAAGCATGCGCT
GACTTTAGTTTTTTTGTTATGACACAGTAAACATTTTGTAATTATCACCC
AAAATTAATTTGAAAAAAAATGATATCATTGCTAAACAAAAAAGAATGTC
TCAAAATGAAAACTTAAC

Coding sequence (CDS) from alignment at sc0000095:425799..432916-

>TCONS_00009526 ID=TCONS_00009526|Name=TCONS_00009526|organism=Clytia hemisphaerica|type=CDS|length=4770bp|location=Sequence derived from alignment at sc0000095:425799..432916- (Clytia hemisphaerica)
TTTCTTACATTGAGAACATTGATTCTGCGAGACCCAGAGTTATATGCCGA
CGTGGAAGTGCTAGATCAATGGGAAAAAGAAACCAAGCATTTACGGTAGA
AGGAAGTAAATGGCAGGAAACATACACCAATGTTAAAGAAATGGTTTGCA
ATGTTGATGCAGATGCTGGTCAAACTTGCTTTTATAAGCAACCACTCTTG
TTGGAATATACTTGTGAAGAACATTAACATCAAGTGGAAGCTTAATTTCA
GGAACATGCAAAACAATCCAAATATGCAATGGTTGCAAAGACGGTCTCAA
GAAGGATGTTTCATGTACAAACGGTCGTAAAATTCACGTCAAATCTGCCA
ACATCATTATGGTCAGAGAAGGACAAGAATTTGAGGTTTCGAACTCCGAC
TGCACGTACTCAGTGACCAAAAATTTGAGACATTTGAAGAATGGTAAAAG
TGAGACAACGTTTCATCAGCTTGAGCATATGTGGGGCGATTATGATCATG
CGGCGTATAGTGAACGTCAAACATGTGATATTTTCCATGGATTTAAAATG
AAGTATTGTTGTCAAATTCGGCGCCACGCATGCAATGGGAATTTTCCAAA
GAGAGATCCAATCAAATGTTACGGCAACCGACGAATAAACATCATCAGTG
CCAAATATGGACGTTTTGGACCCAACCAAAAGAAGATTTGTTTCGTGATT
CCTCAACTTATCAAAATGAAGACATGCCAAGATGACGTGACCGAAAAAAT
GCGTGAAATTTGTAACGGACAATCAGAATGTAATCCGAATGCAATGAAAG
ATCAAATTTTGGATCCTAATCGTTGTGCTAAATGGAATAATTTACTTTTA
TCACGAAGATATTATTTTGAAGTGGATTTTGAATGCAAAGAAGACCATGT
TTTGGCTTAAATTGATTTTGCTTTCAGCTTGCTTTTTGCAATGCTTTTCA
TTCATTTCTTACATTGAGAACATTGATTCTGCGAGACCCAGAGTTATATG
CCGACGTGGAAGTGCTAGATCAATGGGAAAAAGAAACCAAGCATTTACGG
TAGAAGGAAGTAAATGGCAGGAAACATACACCAATGTTAAAGAAATGGTT
TGCAATGTTGATGCAGATGCTGGTCAAACTTGCTTTTATAAGCAACCACT
CTTGTTGGAATATACTTGTGAAGAACATTAACATCAAGTGGAAGCTTAAT
TTCAGGAACATGCAAAACAATCCAAATATGCAATGGTTGCAAAGACGGTC
TCAAGAAGGATGTTTCATGTACAAACGGTCGTAAAATTCACGTCAAATCT
GCCAACATCATTATGGTCAGAGAAGGACAAGAATTTGAGGTTTCGAACTC
CGACTGCACGTACTCAGTGACCAAAAATTTGAGACATTTGAAGAATGGTA
AAAGTGAGACAACGTTTCATCAGCTTGAGCATATGTGGGGCGATTATGAT
CATGCGGCGTATAGTGAACGTCAAACATGTGATATTTTCCATGGATTTAA
AATGAAGTATTGTTGTCAAATTCGGCGCCACGCATGCAATGGGAATTTTC
CAAAGAGAGATCCAATCAAATGTTACGGCAACCGACGAATAAACATCATC
AGTGCCAAATATGGACGTTTTGGACCCAACCAAAAGAAGATTTGTTTCGT
GATTCCTCAACTTATCAAAATGAAGACATGCCAAGATGACGTGACCGAAA
AAATGCGTGAAATTTGTAACGGACAATCAGAATGTAATCCGAATGCAATG
AAAGATCAAATTTTGGATCCTAATCGTTGTGCTAAATGGAATAATTTACT
TTTATCACGAAGATATTATTTTGAAGTGGATTTTGAATGCAAAGAAGACC
ATGTTTTGGCTTAAATTGATTTTGCTTTCAGCTTGCTTTTTGCAATGCTT
TTCATTCATTTCTTACATTGAGAACATTGATTCTGCGAGACCCAGAGTTA
TATGCCGACGTGGAAGTGCTAGATCAATGGGAAAAAGAAACCAAGCATTT
ACGGTAGAAGGAAGTAAATGGCAGGAAACATACACCAATGTTAAAGAAAT
GGTTTGCAATGTTGATGCAGATGCTGGTCAAACTTGCTTTTATAAGCAAC
CACTCTTGTTGGAATATACTTGTGAAGAACATTAACATCAAGTGGAAGCT
TAATTTCAGGAACATGCAAAACAATCCAAATATGCAATGGTTGCAAAGAC
GGTCTCAAGAAGGATGTTTCATGTACAAACGGTCGTAAAATTCACGTCAA
ATCTGCCAACATCATTATGGTCAGAGAAGGACAAGAATTTGAGGTTTCGA
ACTCCGACTGCACGTACTCAGTGACCAAAAATTTGAGACATTTGAAGAAT
GGTAAAAGTGAGACAACGTTTCATCAGCTTGAGCATATGTGGGGCGATTA
TGATCATGCGGCGTATAGTGAACGTCAAACATGTGATATTTTCCATGGAT
TTAAAATGAAGTATTGTTGTCAAATTCGGCGCCACGCATGCAATGGGAAT
TTTCCAAAGAGAGATCCAATCAAATGTTACGGCAACCGACGAATAAACAT
CATCAGTGCCAAATATGGACGTTTTGGACCCAACCAAAAGAAGATTTGTT
TCGTGATTCCTCAACTTATCAAAATGAAGACATGCCAAGATGACGTGACC
GAAAAAATGCGTGAAATTTGTAACGGACAATCAGAATGTAATCCGAATGC
AATGAAAGATCAAATTTTGGATCCTAATCGTTGTGCTAAATGGAATAATT
TACTTTTATCACGAAGATATTATTTTGAAGTGGATTTTGAATGCAAAGAA
GACCATGTTTTGGCTTAAATTGATTTTGCTTTCAGCTTGCTTTTTGCAAT
GCTTTTCATTCATTTCTTACATTGAGAACATTGATTCTGCGAGACCCAGA
GTTATATGCCGACGTGGAAGTGCTAGATCAATGGGAAAAAGAAACCAAGC
ATTTACGGTAGAAGGAAGTAAATGGCAGGAAACATACACCAATGTTAAAG
AAATGGTTTGCAATGTTGATGCAGATGCTGGTCAAACTTGCTTTTATAAG
CAACCACTCTTGTTGGAATATACTTGTGAAGAACATTAACATCAAGTGGA
AGCTTAATTTCAGGAACATGCAAAACAATCCAAATATGCAATGGTTGCAA
AGACGGTCTCAAGAAGGATGTTTCATGTACAAACGGTCGTAAAATTCACG
TCAAATCTGCCAACATCATTATGGTCAGAGAAGGACAAGAATTTGAGGTT
TCGAACTCCGACTGCACGTACTCAGTGACCAAAAATTTGAGACATTTGAA
GAATGGTAAAAGTGAGACAACGTTTCATCAGCTTGAGCATATGTGGGGCG
ATTATGATCATGCGGCGTATAGTGAACGTCAAACATGTGATATTTTCCAT
GGATTTAAAATGAAGTATTGTTGTCAAATTCGGCGCCACGCATGCAATGG
GAATTTTCCAAAGAGAGATCCAATCAAATGTTACGGCAACCGACGAATAA
ACATCATCAGTGCCAAATATGGACGTTTTGGACCCAACCAAAAGAAGATT
TGTTTCGTGATTCCTCAACTTATCAAAATGAAGACATGCCAAGATGACGT
GACCGAAAAAATGCGTGAAATTTGTAACGGACAATCAGAATGTAATCCGA
ATGCAATGAAAGATCAAATTTTGGATCCTAATCGTTGTGCTAAATGGAAT
AATTTACTTTTATCACGAAGATATTATTTTGAAGTGGATTTTGAATGCAA
AGAAGACCATGTTTTGGCTTAAATTGATTTTGCTTTCAGCTTGCTTTTTG
CAATGCTTTTCATTCATTTCTTACATTGAGAACATTGATTCTGCGAGACC
CAGAGTTATATGCCGACGTGGAAGTGCTAGATCAATGGGAAAAAGAAACC
AAGCATTTACGGTAGAAGGAAGTAAATGGCAGGAAACATACACCAATGTT
AAAGAAATGGTTTGCAATGTTGATGCAGATGCTGGTCAAACTTGCTTTTA
TAAGCAACCACTCTTGTTGGAATATACTTGTGAAGAACATTAACATCAAG
TGGAAGCTTAATTTCAGGAACATGCAAAACAATCCAAATATGCAATGGTT
GCAAAGACGGTCTCAAGAAGGATGTTTCATGTACAAACGGTCGTAAAATT
CACGTCAAATCTGCCAACATCATTATGGTCAGAGAAGGACAAGAATTTGA
GGTTTCGAACTCCGACTGCACGTACTCAGTGACCAAAAATTTGAGACATT
TGAAGAATGGTAAAAGTGAGACAACGTTTCATCAGCTTGAGCATATGTGG
GGCGATTATGATCATGCGGCGTATAGTGAACGTCAAACATGTGATATTTT
CCATGGATTTAAAATGAAGTATTGTTGTCAAATTCGGCGCCACGCATGCA
ATGGGAATTTTCCAAAGAGAGATCCAATCAAATGTTACGGCAACCGACGA
ATAAACATCATCAGTGCCAAATATGGACGTTTTGGACCCAACCAAAAGAA
GATTTGTTTCGTGATTCCTCAACTTATCAAAATGAAGACATGCCAAGATG
ACGTGACCGAAAAAATGCGTGAAATTTGTAACGGACAATCAGAATGTAAT
CCGAATGCAATGAAAGATCAAATTTTGGATCCTAATCGTTGTGCTAAATG
GAATAATTTACTTTTATCACGAAGATATTATTTTGAAGTGGATTTTGAAT
GCAAAGAAGACCATGTTTTGGCTTAAATTGATTTTGCTTTCAGCTTGCTT
TTTGCAATGCTTTTCATTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005316XLOC_005316Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009526-exon-sc0000095-1575043694:432824..432916TCONS_00009526-exon-sc0000095-1575043694:432824..432916Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1575043694:432611..432702TCONS_00009526-exon-sc0000095-1575043694:432611..432702Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1575043694:431670..431999TCONS_00009526-exon-sc0000095-1575043694:431670..431999Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1575043694:427769..428068TCONS_00009526-exon-sc0000095-1575043694:427769..428068Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1575043694:426816..426854TCONS_00009526-exon-sc0000095-1575043694:426816..426854Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1575043694:425799..426414TCONS_00009526-exon-sc0000095-1575043694:425799..426414Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1510915933:432824..432916TCONS_00009526-exon-sc0000095-1510915933:432824..432916Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1510915933:432611..432702TCONS_00009526-exon-sc0000095-1510915933:432611..432702Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1510915933:431670..431999TCONS_00009526-exon-sc0000095-1510915933:431670..431999Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1510915933:427769..428068TCONS_00009526-exon-sc0000095-1510915933:427769..428068Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1510915933:426816..426854TCONS_00009526-exon-sc0000095-1510915933:426816..426854Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1510915933:425799..426414TCONS_00009526-exon-sc0000095-1510915933:425799..426414Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1491911889:432824..432916TCONS_00009526-exon-sc0000095-1491911889:432824..432916Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1491911889:432611..432702TCONS_00009526-exon-sc0000095-1491911889:432611..432702Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1491911889:431670..431999TCONS_00009526-exon-sc0000095-1491911889:431670..431999Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1491911889:427769..428068TCONS_00009526-exon-sc0000095-1491911889:427769..428068Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1491911889:426816..426854TCONS_00009526-exon-sc0000095-1491911889:426816..426854Clytia hemisphaericaexon
TCONS_00009526-exon-sc0000095-1491911889:425799..426414TCONS_00009526-exon-sc0000095-1491911889:425799..426414Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009526-proteinTCONS_00009526-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:425799..432916 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.144208	0.274357	0.222988	0.311656	0.0379411	0	0.217029	0.197388	0.316554	0.0293668	0.256537	0.0728135	3.65879	3.28401	0.0798788	0.257167	2.49222	0.800971	10.8864	14.1737	6.7192	6.63173	1.98195	2.93593	6.73819	8.91382	0	0.0823433	0.0639845	0.1628
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000922Lectin_gal-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0030246 carbohydrate binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009526 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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