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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009466 ID=TCONS_00009466|Name=TCONS_00009466|organism=Clytia hemisphaerica|type=transcript|length=576bp
AGTTGTACCATGTCCAAACTCTCTTTGCCACGGATTAGCTGATGGAAACT
ACGAATATAAATACTATGGAGTTTACCGATCCAACTATTTTGTTCAATGC
TCAAACCAATTGGCTTCTTGTCAACCATGTTTCCCATTGTCTTTGGAATT
CAGTCAATCATGCAACCAATGTCTCAACAAGAAAACCGATGACTGTGTCA
CCACTCTGCCATTCCAACCTGCTACCACTTTTGCATGTCCTGACAAATGT
CCTCATGCTGGCAAACACTTCACTGGAAACCTTGCTGATCCAAACAACCC
ACACCAATATGTTGGATGTTATCAAGGACAAACTGTCGGATGTATTGCTT
GTCCTAAAGGATTGTTGTACAACCAAGATTGGGACGCATGTTTGTATGAA
GGAAAATTCAAAACCGAGCACCCAGCACCAAAGAAACattaaattttgtc
attttattcTATGTTTCTTAATAATTTTTCGTCTTTTCTAGAATTTAGTA
GTTGCTGGCTAACTACCTTTCGTATTTTGTCgtgtttaaagggacattaa
agtagtaaaatgtaaacacagCGCGA Run BLAST on NCBI transcript from alignment at sc0000095:261341..262287+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009466 ID=TCONS_00009466|Name=TCONS_00009466|organism=Clytia hemisphaerica|type=transcript|length=947bp|location=Sequence derived from alignment at sc0000095:261341..262287+ (Clytia hemisphaerica)
AGTTGTACCATGTCCAAACTCTCTTTGCCACGGATTAGCTGATGGAAACT
ACGAATATAAATACTATGGAGTTTACCGATCCAACTATTTTGTTCAATGC
TCAAACCAATTGGCTTCTTGTCAACCATGTTTCCCATTGTCTTTGGAATT
CAGTCAATCATGCAACCAATGTCTCAACAAGAAAACCGGTAAGTACCcct
taaaatattctaaatATTTCTCTTTATATATTACAACTGACCTAAGAATT
ATGTTGTGTTTTTTGTCCAACCAGACAAGAGAGACAAGCTAGACACGAAA
ATAAAGCACTCTAGTGCTActgaaaaaacttttggaaGTTTCCACTGTCC
ATAAGACTGAGCAGCTACTACTCCAAATCATATGTATCCTAGTTACCCGT
GGGATTTGATTGCCGAAACAACTTGTTTTAACTTGAAAGTTTTGTTGGTT
TCTTTCGAGCAGCGAACAACTGCAATCTGCGTTTTTCCTATGTTGAAGGA
CCTCTGTTCTCTATCATCAGACCAATCAATGCAACTTTTTTCTGATCTCT
AATTTTTAGATGACTGTGTCACCACTCTGCCATTCCAACCTGCTACCACT
TTTGCATGTCCTGACAAATGTCCTCATGCTGGCAAACACTTCACTGGAAA
CCTTGCTGATCCAAACAACCCACACCAATATGTTGGATGTTATCAAGGAC
AAACTGTCGGATGTATTGCTTGTCCTAAAGGATTGTTGTACAACCAAGAT
TGGGACGCATGTTTGTATGAAGGAAAATTCAAAACCGAGCACCCAGCACC
AAAGAAACattaaattttgtcattttattcTATGTTTCTTAATAATTTTT
CGTCTTTTCTAGAATTTAGTAGTTGCTGGCTAACTACCTTTCGTATTTTG
TCgtgtttaaagggacattaaagtagtaaaatgtaaacacagCGCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009466-exon-sc0000095-1491911889:261341..261528 | TCONS_00009466-exon-sc0000095-1491911889:261341..261528 | Clytia hemisphaerica | exon |
| TCONS_00009466-exon-sc0000095-1510915933:261341..261528 | TCONS_00009466-exon-sc0000095-1510915933:261341..261528 | Clytia hemisphaerica | exon |
| TCONS_00009466-exon-sc0000095-1575043694:261341..261528 | TCONS_00009466-exon-sc0000095-1575043694:261341..261528 | Clytia hemisphaerica | exon |
| TCONS_00009466-exon-sc0000095-1491911889:261900..262287 | TCONS_00009466-exon-sc0000095-1491911889:261900..262287 | Clytia hemisphaerica | exon |
| TCONS_00009466-exon-sc0000095-1510915933:261900..262287 | TCONS_00009466-exon-sc0000095-1510915933:261900..262287 | Clytia hemisphaerica | exon |
| TCONS_00009466-exon-sc0000095-1575043694:261900..262287 | TCONS_00009466-exon-sc0000095-1575043694:261900..262287 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095 | supercontig | sc0000095:261341..262287 + |
Blast
The following BLAST results are available for this feature:
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