TCONS_00009415 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009415
Unique NameTCONS_00009415
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2527

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009415 ID=TCONS_00009415|Name=TCONS_00009415|organism=Clytia hemisphaerica|type=transcript|length=2527bp
ctaCGTTATTAGTTctactgaatttttttcaagatattgaaaaatgaaat
gtgaattacatgtttttatatCAGGTGCACcacaaaaagaattaaaatct
gAAAGCACAAACATCTCAGGAAGAATAATCCTGGATGTATTATTATCaga
tttcttgaaattttttgagaaattcttttgttttccatgAATTCCAACTT
TTTCTTTGTCAACAAAAGATAACTTTCGCaacattttaaaatcttttact
ttaaaAGGCTGATATACTGTATATAAAGATGTCAGTTCCGATCCAAACAA
ACCATTGGAATTCTTACACAGCTTATGATGTTAATTACTGGCCTAGCCTT
AAAGAATCGTTGACAAGATTAAAAGAAAATCCTACATTAAAAGATTTAAA
GGAGCTcatattgaaatatttgaataaaaCAAAGTTATATGGGCCTCAAT
ATGCAGCAACCAGTGGTTCATCTTCCAGAGACATTCCAGACCAAAAGGAC
TTGAAAACACTTGCAACCGTGATCTCTCAGGAGGAGAAAGGTTTTATTGA
AGAGATCATTCCAAAGATCTGTGATATTGCATTGCAACTTGAAGACCTTT
TTCCAGATGGAGAATTAAAAATCCTCGAGCAGACAACAAATCAAGAAATT
AGTTTCAATAGATTACAAGTTGCTTGTTTGGTTTCTCACATGTTCTTCTG
TACCTTTCTTCCTTGCGAGAAGTTGAAATATAGTTACGAGGGGCATTTTT
GCGGCGAAGTCTCACCAACTGGACCAATCACATTTCGTTATTGGCATACC
ACCTTTCAAAAACCAACCATTTTGTACATGAAGTCACTTTTCAACTATTT
CAAGGATATATGTAACACACCTATTGAACAATTGAAATCACAAACAATAA
CATATAGTAGAAAGAGCTTAGATTTCAATGAAAGCCCTGAACCGCTATGG
GAAAATTCTGATAAACAGATCATTACTGTGAATTCTCATTTGACTGGTAG
CATCGGTGATCATGGAGGTCATGTTGAGATGGATTTTGCAAATGCCAATG
TTGGATTCGGTACAACTGGTACACAGGAGGAAATCATCTTAGGCACATCA
CCAGAATCATGCCCTATCGtccttttcaatgaaaaactgAAGCAAACTGA
AGCCATACTCATCCAAGGAGCAAAACGTTATGCTAGTTTCGAAGGTTACG
GATTCTCAGTAAAATACACAGGACCTTTTGTTGAAGATGGTCGTGGTTGG
ACGAAACGTCAAATTTTAGCTATGGATGCGTTATGGGGGCCTGGTGATGA
AGGGAGACAACTTCGTGAAGTATTTCTCAAACGTGAACTTAACAAAGCGT
ATTGTGCTTTTTCAATGGTTGCTGGAGAAATTGTTGATTCTGGGCACTGG
GGGTGTGGCGCATTCGGTGGTAACAAAGGCATCAAAAGTATTCTTCAAAT
CATGGCTGCTTCAGAAGCTGATTTGAAATCGCTCgagttttattgtttta
aagagaAGGATTTTCACAATGCGTTTAGCACGGTACTCAAATTGATCAAA
GAGAAAAACTTAATGGTTGGAGATTTAtggaaattgttcaaaaaatatgg
aaaaagtGGCGTTGCTAATAGCGATTTcggttttcttcattttttaaaga
atgatTTGTCGAAGTTGTAgacaaaactttttatttgtttttgatataTT
TATATAGTTTAACATGAACCTCTAAAGGTTCCCCTGGGTTATTGTAGGGG
CTCGAAATAatgttttcccgtcaaaattttggctgaatccTGGAATcccg
aaatttaaaaaataataacattgtTACGCCGGTTTTTAGAGGTTAAAATA
CCGGAATGCTGAAAAGGCCAATCATAGCCTGTTAGACAAAAACGGTTTTT
TATCGcgataaagaaaaaatttggtttgtgggaaggtactggctaggCAA
ATCACCGTCCCCGTCTGATTTTagaataccgttttcccgtctcttttttc
gtcaaattctGTAATACCGTACTAGAAAAAGGGCCGCTCctgtcacaccg
taaaagtacaagcCCTTGTTATAATATTAAAGCCTTTAAGACTCGAATTC
TCAAAGAATAGgaagattttttgtttcttcttggTATTCTAATCATAGAA
ACTTGTCAATGTAAAAAAAGGTGATCGGTCGAATtgttaaaatctaaaaa
atccatccttttgacttttgactttCACTTTCACCAATTCTAATACCTCC
tgtaaaattcaaatttgtttttaccAAATGAGACAGCAAAACTTCTACCT
TTATTCGAACGATTCTCCCTTTGCCGTTCAAGTTATAAAAACCCCACTAT
GCTATGAGTAATTTTCATAAACTTTTACTATTTGCTGTATTTGTATATCT
CCTGCACATTTTTTTGTACTCACTCGAGCTAAATTATTATGAAATagcaa
atttttatgaaattttgaatgtaATTTATTTATAATTATGTAAATTATCA
AGAAGCtcatgttcttttaaaattatc
Run BLAST on NCBI

protein sequence of TCONS_00009415-protein

>TCONS_00009415-protein ID=TCONS_00009415-protein|Name=TCONS_00009415-protein|organism=Clytia hemisphaerica|type=polypeptide|length=463bp
MSVPIQTNHWNSYTAYDVNYWPSLKESLTRLKENPTLKDLKELILKYLNK
TKLYGPQYAATSGSSSRDIPDQKDLKTLATVISQEEKGFIEEIIPKICDI
ALQLEDLFPDGELKILEQTTNQEISFNRLQVACLVSHMFFCTFLPCEKLK
YSYEGHFCGEVSPTGPITFRYWHTTFQKPTILYMKSLFNYFKDICNTPIE
QLKSQTITYSRKSLDFNESPEPLWENSDKQIITVNSHLTGSIGDHGGHVE
MDFANANVGFGTTGTQEEIILGTSPESCPIVLFNEKLKQTEAILIQGAKR
YASFEGYGFSVKYTGPFVEDGRGWTKRQILAMDALWGPGDEGRQLREVFL
KRELNKAYCAFSMVAGEIVDSGHWGCGAFGGNKGIKSILQIMAASEADLK
SLEFYCFKEKDFHNAFSTVLKLIKEKNLMVGDLWKLFKKYGKSGVANSDF
GFLHFLKNDLSKL
Run BLAST on NCBI

transcript from alignment at sc0000093:623681..627685-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009415 ID=TCONS_00009415|Name=TCONS_00009415|organism=Clytia hemisphaerica|type=transcript|length=4005bp|location=Sequence derived from alignment at sc0000093:623681..627685- (Clytia hemisphaerica)
CTACGTTATTAGTTCTACTGAATTTTTTTCAAGATATTGAAAAATGAAAT
GTGAATTACATGTTTTTATATCAGGTGCACCACAAAAAGAATTAAAATCT
GAAAGCACAAACATCTCAGGAAGAATAATCCTGGATGTATTATTATCAGA
TTTCTTGAAATTTTTTGAGAAATTCTTTTGTTTTCCATGAATTCCAACTT
TTTCTTTGTCAACAAAAGATAACTTTCGCAACATTTTAAAATCTTTTACT
TTAAAAGGCTGATATACTGTATATAAAGATGTCAGTTCCGATCCAAACAA
ACCATTGGAATTCTTACACAGCTTATGATGTTAATTACTGGCCTAGCCTT
AAAGAATCGTTGACAAGATTAAAAGAAAATCCTACATTAAAAGATTTAAA
GGAGCTCATATTGAAATATTTGAATAAAACAAAGTTATATGGGCCTCAAT
ATGCAGCAACCAGTGGTTCATCTTCCAGAGACATTCCAGACCAAAAGGAC
TTGAAAACACTTGCAACCGTGATCTCTCAGGAGGTTTGTTATGAACATCG
TTTTTTTATAAGAGCATCCAAAATTTTTGAAGTTTTCGGATGTTCTTAAC
TTTTTGAGTTTCAAGCCTAAAAATGTTCTTAACATGTTCTTAATTTCACC
ATTTTATGAATGATTTTGCCAATTTTCCTAAGAAATCGGGTGTTTTAGAG
TCCACAAAGCCTTAAAATGCTCTTTAACATTTTGACAATCGAAGCCTTAT
GTTCTTATATAGTTTTTTCTTATATAAAAAAACGTGTATCCTTGTTTTGA
TGAAATTAATAAACATTATCTATTACCAATAATATTGTTCTAAAAGAATA
ACCAGAGTCTACAACTACAATTTCGCCGAATTACTAGATTATTTGTTCAA
AAAAAATTATTCTCTGTAACTTTTATATAACAATTCTCAGGAAATATTTA
ATTCTTTTGTATTTTCATCTATATTTTTCATGAAAACACCCTTAAGTGTT
CCTGCTTTTCGGCTTAAGTCCTTATAAAAGAACGGGTTATTCGCCAAAAC
TATTTATCGCTCTTAACTCGCAATAATTAATTCCATTAACGAGTTGGACC
TTTTACCAAAATTTATTATATTAAGGTTAAGTTATCCTTTTATTGACCCA
GAGAAACATTTACCCATCCTCCGTTTGGTTTTGCTTTTGAATATTCATTG
TCATTTTGCAAATTTTTGAATCGTGGAAAGATTGTAGAAAGACCTTACTT
CTCGTTATTAGGTTTGGACGTTCGTCGAGCATAAACTAGACGGCGGCAAT
TTTTCTGATGGGGAATTAGAAATTATTCGTTTTTTCTTTAGGAGAAAGGT
TTTATTGAAGAGATCATTCCAAAGATCTGTGATATTGCATTGCAACTTGA
AGACCTTTTTCCAGATGGAGAATTAAAAATCCTCGAGCAGACAACAAATC
AAGAAATTAGTTTCAATAGATTACAAGTTGCTTGTTTGGTTTCTCACATG
TTCTTCTGTACCTTTCTTCCTTGCGAGAAGTTGAAATATGTAAGTCACTT
GATTACATTGAACTTTCCTTATATAACTGCCAAATTAACCTATCATCCCC
TCCATCCCTGGTCAAAATTGGAGGGGGATTCTACTTGAGGGCAACTCTCA
CGTGACGAATAAACGGGGGCTGTAATAAAGGGAGGGGGTTGAAAATTTCC
AAATCTTTAATAAAGGGGGTGGGTAATCGCCAGGGATAGGAAATTATACC
TCTAGGTACCACTAAAATAAGGTTGTTGTAGATAACCTTACTAATACGCG
AGGGGGCGTTTATTAGGCATCTAAAACATTCATTCCATGAATTTTTTTCC
ATTATTAGAGTTACGAGGGGCATTTTTGCGGCGAAGTCTCACCAACTGGA
CCAATCACATTTCGTTATTGGCATACCACCTTTCAAAAACCAACCATTTT
GTACATGAAGTCACTTTTCAACTATTTCAAGGATATATGTAACACACCTA
TTGAACAATTGAAATCACAAACAATAACATATAGTAGAAAGAGCTTAGAT
TTCAATGAAAGCCCTGAACCGCTATGGGAAAATTCTGATAAACAGATCAT
TACTGTGAATTCTCATTTGACTGGTAGCATCGGTGATCATGGAGGTCATG
TTGAGATGGATTTTGCAAATGCCAATGTTGGATTCGGTACAACTGGTACA
CAGGAGGAAATCATCTTAGGCACATCACCAGAATCATGCCCTATCGTCCT
TTTCAATGAAAAACTGAAGCAAACTGAAGCCATACTCATCCAAGGAGCAA
AACGTTATGCTAGTTTCGAAGGTTACGGATTCTCAGTAAAATACACAGGA
CCTTTTGTTGAAGATGGTCGTGGTTGGACGAAACGTCAAATTTTAGCTAT
GGATGCGTTATGGGGGCCTGGTGATGAAGGGAGACAACTTCGTGAAGTAT
TTCTCAAACGTGAACTTAACAAAGCGTATTGTGCTTTTTCAATGGTTGCT
GGAGAAATTGTTGATTCTGGGCACTGGGGGTGTGGCGCATTCGGTGGTAA
GTTCAGCTAAATTTTTAAGCAACTCAACTTTTTCGGCATTTCAGGGGCTT
TCAAAAGGATATTCCAAAAGTTGATTGAAAATTGTAAACGGAATAATTTT
TAACAATATTTGATCCTAAAGCCGAATACTTCATTATGTACCCAAATATT
TACCAATGACTTTAACCTTGTAATTTCTACATCGTGTTATAACATCAGAA
TTTGAAATTCAATGGAAAACATTTCAACTCCACTATGGGGAAAAGCTCCA
CCGGGGCACTGAGATAGGGGTGTGCCATGACCTCTCTCCGTCAAATATAC
CCTCACTGCTGTTATTTATCGTTTTATTTTCTTTTTTTATACTCCAGGTA
ACAAAGGCATCAAAAGTATTCTTCAAATCATGGCTGCTTCAGAAGCTGAT
TTGAAATCGCTCGAGTTTTATTGTTTTAAAGAGAAGGATTTTCACAATGC
GTTTAGCACGGTACTCAAATTGATCAAAGAGAAAAACTTAATGGTTGGAG
ATTTATGGAAATTGTTCAAAAAATATGGAAAAAGTGGCGTTGCTAATAGC
GATTTCGGTTTTCTTCATTTTTTAAAGAATGATTTGTCGAAGTTGTAGAC
AAAACTTTTTATTTGTTTTTGATATATTTATATAGTTTAACATGAACCTC
TAAAGGTTCCCCTGGGTTATTGTAGGGGCTCGAAATAATGTTTTCCCGTC
AAAATTTTGGCTGAATCCTGGAATCCCGAAATTTAAAAAATAATAACATT
GTTACGCCGGTTTTTAGAGGTTAAAATACCGGAATGCTGAAAAGGCCAAT
CATAGCCTGTTAGACAAAAACGGTTTTTTATCGCGATAAAGAAAAAATTT
GGTTTGTGGGAAGGTACTGGCTAGGCAAATCACCGTCCCCGTCTGATTTT
AGAATACCGTTTTCCCGTCTCTTTTTTCGTCAAATTCTGTAATACCGTAC
TAGAAAAAGGGCCGCTCCTGTCACACCGTAAAAGTACAAGCCCTTGTTAT
AATATTAAAGCCTTTAAGACTCGAATTCTCAAAGAATAGGAAGATTTTTT
GTTTCTTCTTGGTATTCTAATCATAGAAACTTGTCAATGTAAAAAAAGGT
GATCGGTCGAATTGTTAAAATCTAAAAAATCCATCCTTTTGACTTTTGAC
TTTCACTTTCACCAATTCTAATACCTCCTGTAAAATTCAAATTTGTTTTT
ACCAAATGAGACAGCAAAACTTCTACCTTTATTCGAACGATTCTCCCTTT
GCCGTTCAAGTTATAAAAACCCCACTATGCTATGAGTAATTTTCATAAAC
TTTTACTATTTGCTGTATTTGTATATCTCCTGCACATTTTTTTGTACTCA
CTCGAGCTAAATTATTATGAAATAGCAAATTTTTATGAAATTTTGAATGT
AATTTATTTATAATTATGTAAATTATCAAGAAGCTCATGTTCTTTTAAAA
TTATC

Coding sequence (CDS) from alignment at sc0000093:623681..627685-

>TCONS_00009415 ID=TCONS_00009415|Name=TCONS_00009415|organism=Clytia hemisphaerica|type=CDS|length=5568bp|location=Sequence derived from alignment at sc0000093:623681..627685- (Clytia hemisphaerica)
GTAACAAAGGCATCAAAAGTATTCTTCAAATCATGGCTGCTTCAGAAGCT
GATTTGAAATCGCTCGAGTTTTATTGTTTTAAAGAGAAGGATTTTCACAA
TGCGTTTAGCACGGTACTCAAATTGATCAAAGAGAAAAACTTAATGGTTG
GAGATTTATGGAAATTGTTCAAAAAATATGGAAAAAGTGGCGTTGCTAAT
AGCGATTTCGGTTTTCTTCATTTTTTAAAGAATGATTTGTCGAAGTTGTA
GAGTTACGAGGGGCATTTTTGCGGCGAAGTCTCACCAACTGGACCAATCA
CATTTCGTTATTGGCATACCACCTTTCAAAAACCAACCATTTTGTACATG
AAGTCACTTTTCAACTATTTCAAGGATATATGTAACACACCTATTGAACA
ATTGAAATCACAAACAATAACATATAGTAGAAAGAGCTTAGATTTCAATG
AAAGCCCTGAACCGCTATGGGAAAATTCTGATAAACAGATCATTACTGTG
AATTCTCATTTGACTGGTAGCATCGGTGATCATGGAGGTCATGTTGAGAT
GGATTTTGCAAATGCCAATGTTGGATTCGGTACAACTGGTACACAGGAGG
AAATCATCTTAGGCACATCACCAGAATCATGCCCTATCGTCCTTTTCAAT
GAAAAACTGAAGCAAACTGAAGCCATACTCATCCAAGGAGCAAAACGTTA
TGCTAGTTTCGAAGGTTACGGATTCTCAGTAAAATACACAGGACCTTTTG
TTGAAGATGGTCGTGGTTGGACGAAACGTCAAATTTTAGCTATGGATGCG
TTATGGGGGCCTGGTGATGAAGGGAGACAACTTCGTGAAGTATTTCTCAA
ACGTGAACTTAACAAAGCGTATTGTGCTTTTTCAATGGTTGCTGGAGAAA
TTGTTGATTCTGGGCACTGGGGGTGTGGCGCATTCGGTGGAGAAAGGTTT
TATTGAAGAGATCATTCCAAAGATCTGTGATATTGCATTGCAACTTGAAG
ACCTTTTTCCAGATGGAGAATTAAAAATCCTCGAGCAGACAACAAATCAA
GAAATTAGTTTCAATAGATTACAAGTTGCTTGTTTGGTTTCTCACATGTT
CTTCTGTACCTTTCTTCCTTGCGAGAAGTTGAAATATATGTCAGTTCCGA
TCCAAACAAACCATTGGAATTCTTACACAGCTTATGATGTTAATTACTGG
CCTAGCCTTAAAGAATCGTTGACAAGATTAAAAGAAAATCCTACATTAAA
AGATTTAAAGGAGCTCATATTGAAATATTTGAATAAAACAAAGTTATATG
GGCCTCAATATGCAGCAACCAGTGGTTCATCTTCCAGAGACATTCCAGAC
CAAAAGGACTTGAAAACACTTGCAACCGTGATCTCTCAGGAGGTAACAAA
GGCATCAAAAGTATTCTTCAAATCATGGCTGCTTCAGAAGCTGATTTGAA
ATCGCTCGAGTTTTATTGTTTTAAAGAGAAGGATTTTCACAATGCGTTTA
GCACGGTACTCAAATTGATCAAAGAGAAAAACTTAATGGTTGGAGATTTA
TGGAAATTGTTCAAAAAATATGGAAAAAGTGGCGTTGCTAATAGCGATTT
CGGTTTTCTTCATTTTTTAAAGAATGATTTGTCGAAGTTGTAGAGTTACG
AGGGGCATTTTTGCGGCGAAGTCTCACCAACTGGACCAATCACATTTCGT
TATTGGCATACCACCTTTCAAAAACCAACCATTTTGTACATGAAGTCACT
TTTCAACTATTTCAAGGATATATGTAACACACCTATTGAACAATTGAAAT
CACAAACAATAACATATAGTAGAAAGAGCTTAGATTTCAATGAAAGCCCT
GAACCGCTATGGGAAAATTCTGATAAACAGATCATTACTGTGAATTCTCA
TTTGACTGGTAGCATCGGTGATCATGGAGGTCATGTTGAGATGGATTTTG
CAAATGCCAATGTTGGATTCGGTACAACTGGTACACAGGAGGAAATCATC
TTAGGCACATCACCAGAATCATGCCCTATCGTCCTTTTCAATGAAAAACT
GAAGCAAACTGAAGCCATACTCATCCAAGGAGCAAAACGTTATGCTAGTT
TCGAAGGTTACGGATTCTCAGTAAAATACACAGGACCTTTTGTTGAAGAT
GGTCGTGGTTGGACGAAACGTCAAATTTTAGCTATGGATGCGTTATGGGG
GCCTGGTGATGAAGGGAGACAACTTCGTGAAGTATTTCTCAAACGTGAAC
TTAACAAAGCGTATTGTGCTTTTTCAATGGTTGCTGGAGAAATTGTTGAT
TCTGGGCACTGGGGGTGTGGCGCATTCGGTGGAGAAAGGTTTTATTGAAG
AGATCATTCCAAAGATCTGTGATATTGCATTGCAACTTGAAGACCTTTTT
CCAGATGGAGAATTAAAAATCCTCGAGCAGACAACAAATCAAGAAATTAG
TTTCAATAGATTACAAGTTGCTTGTTTGGTTTCTCACATGTTCTTCTGTA
CCTTTCTTCCTTGCGAGAAGTTGAAATATATGTCAGTTCCGATCCAAACA
AACCATTGGAATTCTTACACAGCTTATGATGTTAATTACTGGCCTAGCCT
TAAAGAATCGTTGACAAGATTAAAAGAAAATCCTACATTAAAAGATTTAA
AGGAGCTCATATTGAAATATTTGAATAAAACAAAGTTATATGGGCCTCAA
TATGCAGCAACCAGTGGTTCATCTTCCAGAGACATTCCAGACCAAAAGGA
CTTGAAAACACTTGCAACCGTGATCTCTCAGGAGGTAACAAAGGCATCAA
AAGTATTCTTCAAATCATGGCTGCTTCAGAAGCTGATTTGAAATCGCTCG
AGTTTTATTGTTTTAAAGAGAAGGATTTTCACAATGCGTTTAGCACGGTA
CTCAAATTGATCAAAGAGAAAAACTTAATGGTTGGAGATTTATGGAAATT
GTTCAAAAAATATGGAAAAAGTGGCGTTGCTAATAGCGATTTCGGTTTTC
TTCATTTTTTAAAGAATGATTTGTCGAAGTTGTAGAGTTACGAGGGGCAT
TTTTGCGGCGAAGTCTCACCAACTGGACCAATCACATTTCGTTATTGGCA
TACCACCTTTCAAAAACCAACCATTTTGTACATGAAGTCACTTTTCAACT
ATTTCAAGGATATATGTAACACACCTATTGAACAATTGAAATCACAAACA
ATAACATATAGTAGAAAGAGCTTAGATTTCAATGAAAGCCCTGAACCGCT
ATGGGAAAATTCTGATAAACAGATCATTACTGTGAATTCTCATTTGACTG
GTAGCATCGGTGATCATGGAGGTCATGTTGAGATGGATTTTGCAAATGCC
AATGTTGGATTCGGTACAACTGGTACACAGGAGGAAATCATCTTAGGCAC
ATCACCAGAATCATGCCCTATCGTCCTTTTCAATGAAAAACTGAAGCAAA
CTGAAGCCATACTCATCCAAGGAGCAAAACGTTATGCTAGTTTCGAAGGT
TACGGATTCTCAGTAAAATACACAGGACCTTTTGTTGAAGATGGTCGTGG
TTGGACGAAACGTCAAATTTTAGCTATGGATGCGTTATGGGGGCCTGGTG
ATGAAGGGAGACAACTTCGTGAAGTATTTCTCAAACGTGAACTTAACAAA
GCGTATTGTGCTTTTTCAATGGTTGCTGGAGAAATTGTTGATTCTGGGCA
CTGGGGGTGTGGCGCATTCGGTGGAGAAAGGTTTTATTGAAGAGATCATT
CCAAAGATCTGTGATATTGCATTGCAACTTGAAGACCTTTTTCCAGATGG
AGAATTAAAAATCCTCGAGCAGACAACAAATCAAGAAATTAGTTTCAATA
GATTACAAGTTGCTTGTTTGGTTTCTCACATGTTCTTCTGTACCTTTCTT
CCTTGCGAGAAGTTGAAATATATGTCAGTTCCGATCCAAACAAACCATTG
GAATTCTTACACAGCTTATGATGTTAATTACTGGCCTAGCCTTAAAGAAT
CGTTGACAAGATTAAAAGAAAATCCTACATTAAAAGATTTAAAGGAGCTC
ATATTGAAATATTTGAATAAAACAAAGTTATATGGGCCTCAATATGCAGC
AACCAGTGGTTCATCTTCCAGAGACATTCCAGACCAAAAGGACTTGAAAA
CACTTGCAACCGTGATCTCTCAGGAGGTAACAAAGGCATCAAAAGTATTC
TTCAAATCATGGCTGCTTCAGAAGCTGATTTGAAATCGCTCGAGTTTTAT
TGTTTTAAAGAGAAGGATTTTCACAATGCGTTTAGCACGGTACTCAAATT
GATCAAAGAGAAAAACTTAATGGTTGGAGATTTATGGAAATTGTTCAAAA
AATATGGAAAAAGTGGCGTTGCTAATAGCGATTTCGGTTTTCTTCATTTT
TTAAAGAATGATTTGTCGAAGTTGTAGAGTTACGAGGGGCATTTTTGCGG
CGAAGTCTCACCAACTGGACCAATCACATTTCGTTATTGGCATACCACCT
TTCAAAAACCAACCATTTTGTACATGAAGTCACTTTTCAACTATTTCAAG
GATATATGTAACACACCTATTGAACAATTGAAATCACAAACAATAACATA
TAGTAGAAAGAGCTTAGATTTCAATGAAAGCCCTGAACCGCTATGGGAAA
ATTCTGATAAACAGATCATTACTGTGAATTCTCATTTGACTGGTAGCATC
GGTGATCATGGAGGTCATGTTGAGATGGATTTTGCAAATGCCAATGTTGG
ATTCGGTACAACTGGTACACAGGAGGAAATCATCTTAGGCACATCACCAG
AATCATGCCCTATCGTCCTTTTCAATGAAAAACTGAAGCAAACTGAAGCC
ATACTCATCCAAGGAGCAAAACGTTATGCTAGTTTCGAAGGTTACGGATT
CTCAGTAAAATACACAGGACCTTTTGTTGAAGATGGTCGTGGTTGGACGA
AACGTCAAATTTTAGCTATGGATGCGTTATGGGGGCCTGGTGATGAAGGG
AGACAACTTCGTGAAGTATTTCTCAAACGTGAACTTAACAAAGCGTATTG
TGCTTTTTCAATGGTTGCTGGAGAAATTGTTGATTCTGGGCACTGGGGGT
GTGGCGCATTCGGTGGAGAAAGGTTTTATTGAAGAGATCATTCCAAAGAT
CTGTGATATTGCATTGCAACTTGAAGACCTTTTTCCAGATGGAGAATTAA
AAATCCTCGAGCAGACAACAAATCAAGAAATTAGTTTCAATAGATTACAA
GTTGCTTGTTTGGTTTCTCACATGTTCTTCTGTACCTTTCTTCCTTGCGA
GAAGTTGAAATATATGTCAGTTCCGATCCAAACAAACCATTGGAATTCTT
ACACAGCTTATGATGTTAATTACTGGCCTAGCCTTAAAGAATCGTTGACA
AGATTAAAAGAAAATCCTACATTAAAAGATTTAAAGGAGCTCATATTGAA
ATATTTGAATAAAACAAAGTTATATGGGCCTCAATATGCAGCAACCAGTG
GTTCATCTTCCAGAGACATTCCAGACCAAAAGGACTTGAAAACACTTGCA
ACCGTGATCTCTCAGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005272XLOC_005272Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009415-exon-sc0000093-1575043694:627153..627685TCONS_00009415-exon-sc0000093-1575043694:627153..627685Clytia hemisphaericaexon
TCONS_00009415-exon-sc0000093-1575043694:626147..626344TCONS_00009415-exon-sc0000093-1575043694:626147..626344Clytia hemisphaericaexon
TCONS_00009415-exon-sc0000093-1575043694:625140..625827TCONS_00009415-exon-sc0000093-1575043694:625140..625827Clytia hemisphaericaexon
TCONS_00009415-exon-sc0000093-1575043694:623681..624788TCONS_00009415-exon-sc0000093-1575043694:623681..624788Clytia hemisphaericaexon
TCONS_00009415-exon-sc0000093-1510915933:627153..627685TCONS_00009415-exon-sc0000093-1510915933:627153..627685Clytia hemisphaericaexon
TCONS_00009415-exon-sc0000093-1510915933:626147..626344TCONS_00009415-exon-sc0000093-1510915933:626147..626344Clytia hemisphaericaexon
TCONS_00009415-exon-sc0000093-1510915933:625140..625827TCONS_00009415-exon-sc0000093-1510915933:625140..625827Clytia hemisphaericaexon
TCONS_00009415-exon-sc0000093-1510915933:623681..624788TCONS_00009415-exon-sc0000093-1510915933:623681..624788Clytia hemisphaericaexon
TCONS_00009415-exon-sc0000093-1491911889:627153..627685TCONS_00009415-exon-sc0000093-1491911889:627153..627685Clytia hemisphaericaexon
TCONS_00009415-exon-sc0000093-1491911889:626147..626344TCONS_00009415-exon-sc0000093-1491911889:626147..626344Clytia hemisphaericaexon
TCONS_00009415-exon-sc0000093-1491911889:625140..625827TCONS_00009415-exon-sc0000093-1491911889:625140..625827Clytia hemisphaericaexon
TCONS_00009415-exon-sc0000093-1491911889:623681..624788TCONS_00009415-exon-sc0000093-1491911889:623681..624788Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009415-proteinTCONS_00009415-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:623681..627685 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.74965	5.73124	3.43124	3.61124	3.73586	2.82164	4.05355	5.26862	5.94575	8.67477	12.3431	5.33108	14.8717	10.7191	4.86689	5.91309	3.05625	4.05112	12.2293	14.8801	7.78958	7.59098	5.63316	6.65298	11.7493	22.9372	10.2415	7.212	16.4271	10.8866
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR007724Poly_GlycHdrlase
Vocabulary: Molecular Function
TermDefinition
GO:0004649poly(ADP-ribose) glycohydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0004649 poly(ADP-ribose) glycohydrolase activity
Blast
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BLAST of TCONS_00009415 vs. Swiss-Prot (Human)
Match: PARG (Poly(ADP-ribose) glycohydrolase OS=Homo sapiens GN=PARG PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.325e-34
Identity = 118/376 (31.38%), Postives = 201/376 (53.46%), Query Frame = 3 
Query:  531 EEKGFIEEIIPKICDIALQLEDLFPDGELKILEQTTNQEISFNRLQVACLVSHMFFCTF-LPCEKLKYSYEGHFCGEVSPTGPITFRYWHTTFQKPTILYMKSLFNYFKDICNTPIEQLKSQTITYSRKSL-DFNESPEPLWENSDKQIITVNSHLTGSIGDHG-GHVEMDFANANVGFGTTGT---QEEIILGTSPESCPIVLFNEKLKQTEAILIQGAKRYASFEGYGFSVKYTGPFVEDGR---GWTKR--QILAMDALWGPGDEGRQLREVF----LKRELNKAYCAF--SMVAGE---IVDSGHWGCGAFGGNKGIKSILQIMAASEADLKSLEFYCFKEKDFHNAFSTVLKLIKEKNLMVGDLWKLFKKY 1598
            E +   + I+P +  IAL L ++     + +L+Q  N  I+ ++ Q+A L+++ FFCTF     K+K  Y  +      P       +   + +KP  L  K+LF YF+ +     E+  +  +T++R+SL DF     P WE  +K +  ++    G+I ++G G +++DFAN  VG G T     QEEI    +PE     LF E L   E ++I G ++Y+ + GY  + +++    EDG     W +R  +I+A+DAL       R+  + F    ++RELNKAYC F    V+ E    V +G+WGCGAFGG+  +K+++QI+AA+ A+ + + ++ F + +      ++   + E+ L VGD++KL  +Y
Sbjct:  585 EAQHLYQSILPDMVKIALCLPNICTQP-IPLLKQKMNHSITMSQEQIASLLANAFFCTFPRRNAKMKSEYSSY------PDINFNRLFEGRSSRKPEKL--KTLFCYFRRV----TEKKPTGLVTFTRQSLEDF-----PEWERCEKPLTRLHVTYEGTIEENGQGMLQVDFANRFVGGGVTSAGLVQEEIRFLINPELIISRLFTEVLDHNECLIITGTEQYSEYTGYAETYRWSRSH-EDGSERDDWQRRCTEIVAIDAL-----HFRRYLDQFVPEKMRRELNKAYCGFLRPGVSSENLSAVATGNWGCGAFGGDARLKALIQILAAAAAE-RDVVYFTFGDSELMRDIYSMHIFLTERKLTVGDVYKLLLRY 935
The following BLAST results are available for this feature:
BLAST of TCONS_00009415 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PARG5.325e-3431.38Poly(ADP-ribose) glycohydrolase OS=Homo sapiens GN... [more]
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