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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009349 ID=TCONS_00009349|Name=TCONS_00009349|organism=Clytia hemisphaerica|type=transcript|length=611bp
AAATGGTAAAATAAAATGACTAATCAGATGAATTGATTGTAGCCAAGATT
TTGCGTGACTAGACTAGActgtgttttgattttaaaactcaagtttatta
tttacaaaaataaggTTATTTTCATTGAGAAAGAAGGAACTTCATAATTA
TGAGATCTCTGACCATTCTCACAAATATTTTCGACGTTCGTGTTTATGCA
TGCATTATGTGAGTCTATCACCAAGCGTTCTCTCTGTTTAATTAGAAATT
CATTTATTCACAATGTTTTTTCCACTGATGTAGCATTTTCAACAGTTTTA
TTGATGGAATTCATCTTTGATAGTCATCCACGAGCAACGATAAACATTCT
CTTCCGCTATATTTGGTTATTCTAACCTTTGAGctacattttcattttgt
aaaaaagatAACTGAAGACTAACAACACCCCTTGTTTTAACTCGATTTTG
CTTCCTCTGTTGGATTAGATTCAGTCTGTTCTACTTTTGGGGCTTCTGGC
TCGGCGGCAGGAGCCTCTGCTTCGGCAGCAGGGGCCTCTGGCTCGGCGGT
GGGAGTTTTGATCACTTCCTCTTCAGTTGCTGGAGCAGGAGCTTTGCCGT
TTTGAGCTGAA Run BLAST on NCBI transcript from alignment at sc0000093:124998..125854+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009349 ID=TCONS_00009349|Name=TCONS_00009349|organism=Clytia hemisphaerica|type=transcript|length=857bp|location=Sequence derived from alignment at sc0000093:124998..125854+ (Clytia hemisphaerica)
AAATGGTAAAATAAAATGACTAATCAGATGAATTGATTGTAGCCAAGATT
TTGCGTGACTAGACTAGActgtgttttgattttaaaactcaagtttatta
tttacaaaaataaggTTATTTTCATTGAGAAAGAAGGAACTTCATAATTA
TGAGATCTCTGACCATTCTCACAAATATTTTCGACGTTCGTGTTTATGCA
TGCATTATGTGAGTCTATCACCAAGCGTTCTCTCTGTTTAATTAGAAATT
CATTTATTCACAATGTTTTTTCCACTGATGTAGCATTTTCAACAGTTTTA
TTGATGGAATTCATCTTTGATAGTCATCCACGAGCAACGATAAACATTCT
CTTCCGCTATATTTGGTTATTCTAACCTTTGAGctacattttcattttgt
aaaaaagatAACTGAAGACTAACAACACCCCTTGTTTTAACTCGATTTTG
CTTCCTCTGTTGGATTAGATTCAGTCTGTTCTACTTTTGGGGCTTCTGGC
TCTACTTTCGGGGCTTCTGGTTCGGCTGCTGGGGCCTCTGGCTCGGCAGC
AGGTGCTTTTGGTTCAGCAGCAGGAGCTTCAGGCTCGGCGGCAGGAGCCT
CTGGTTCGGCTGTTGGTGCTTCTGGTTCGGCTGCTGGTGCTTCAGGTTCG
GCTGCTGGTGCTTCTGGTTCGGCTGCTGGTGCTTCTGGTTCGGCGGCAGG
AGCCTCTGGTTCGGCGGCAGGTGCCTCTGGTTCGGCTGCTGGTGCTTCAG
GTTCGGCGGCAGGAGCTTCGGCAGCAGGGGCCTCTGGCTCGGCGGTGGGA
GTTTTGATCACTTCCTCTTCAGTTGCTGGAGCAGGAGCTTTGCCGTTTTG
AGCTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009349-exon-sc0000093-1491911889:124998..125495 | TCONS_00009349-exon-sc0000093-1491911889:124998..125495 | Clytia hemisphaerica | exon |
| TCONS_00009349-exon-sc0000093-1510915933:124998..125495 | TCONS_00009349-exon-sc0000093-1510915933:124998..125495 | Clytia hemisphaerica | exon |
| TCONS_00009349-exon-sc0000093-1575043694:124998..125495 | TCONS_00009349-exon-sc0000093-1575043694:124998..125495 | Clytia hemisphaerica | exon |
| TCONS_00009349-exon-sc0000093-1491911889:125580..125600 | TCONS_00009349-exon-sc0000093-1491911889:125580..125600 | Clytia hemisphaerica | exon |
| TCONS_00009349-exon-sc0000093-1510915933:125580..125600 | TCONS_00009349-exon-sc0000093-1510915933:125580..125600 | Clytia hemisphaerica | exon |
| TCONS_00009349-exon-sc0000093-1575043694:125580..125600 | TCONS_00009349-exon-sc0000093-1575043694:125580..125600 | Clytia hemisphaerica | exon |
| TCONS_00009349-exon-sc0000093-1491911889:125763..125854 | TCONS_00009349-exon-sc0000093-1491911889:125763..125854 | Clytia hemisphaerica | exon |
| TCONS_00009349-exon-sc0000093-1510915933:125763..125854 | TCONS_00009349-exon-sc0000093-1510915933:125763..125854 | Clytia hemisphaerica | exon |
| TCONS_00009349-exon-sc0000093-1575043694:125763..125854 | TCONS_00009349-exon-sc0000093-1575043694:125763..125854 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000093 | supercontig | sc0000093:124998..125854 + |
Blast
The following BLAST results are available for this feature:
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