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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009090 ID=TCONS_00009090|Name=TCONS_00009090|organism=Clytia hemisphaerica|type=transcript|length=955bp
CTTTAAATCCAATATCTAGATAATCATGACATTCGACAAACTCTTTCTTG
ATAAAAACATACTTTGTTCCATCGATTGGAGACAAAACgttttcttgttt
tctattcGTCAAAATCAAACTGATTTCTCGATACCAGACTTCATAAGatt
cgaaaacattttcttcCCATTTTTTCCCTTCAAAGAAAGTATCAGCTCCC
CAAGCTAACTTTTCCACTTTTGTGAAATGCTTCtgaggtttttctttttt
gacagaTACAACTTTCTTGGGTTTGACCACATCGTTTGACTGGTTGTTCT
TTAACTTTAACTTTTGAATCTCGTTTCGAAGTGTTTGGATTGTTGCGTCT
TTTTCTTTCGTCAACGCAACAAGTTTCAGGTTGTGAtcattttccaaatc
tttaagTTTAAGTTTGTGATCATTTACCAAATCCTTGGTTTTTGTTTGGT
TGagattttccaaatctttaagTTTCAGTTTGTGATCATTTACCAAATCT
TTAAGTTTAAGTTTGTGATCACTTTCCATATCTTTGATTTGAAGTTTGAA
GTCGTTATCTTTTCCCAGAATCTCCTGGTCTTTTGTCATCAGTTTCATTT
TGCACTCGTTGTCCTTGGTTGCAATCTCCTTGTCTTTCTCGTTCAGTTTT
AACGTTGTCTCATCTACCTTAGTTGCCATTTCCTTGTTTTTCATTACAag
ttgtttttccatttcattcaGTTTATTTTGAAGCTCGCGGTCGGCTTGAA
TTTGTTTCAACTCTATCCCATGTGAATGTTTCAAATTAAGCAGCTCCAAT
TGATGTGTTAAGTTGGCATTTTTCATTTGTGCTTCCATCAATTCAATCTT
TGATTCGTAGGTcagtttttgaaattctttttgatgttcttctttcaact
tttttatttcaacactATCAGATTTTTTCGGAGGATTTCTATCATTTGCG
CTGTG Run BLAST on NCBI transcript from alignment at sc0000090:172359..173445+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009090 ID=TCONS_00009090|Name=TCONS_00009090|organism=Clytia hemisphaerica|type=transcript|length=1087bp|location=Sequence derived from alignment at sc0000090:172359..173445+ (Clytia hemisphaerica)
CTTTAAATCCAATATCTAGATAATCATGACATTCGACAAACTCTTTCTTG
ATAAAAACATACTTTGTTCCATCGATTGGAGACAAAACgttttcttgttt
tctattcGTCAAAATCAAACTGATTTCTCGATACCAGACTTCATAAGatt
cgaaaacattttcttcCCATTTTTTCCCTTCAAAGAAAGTATCAGCTCCC
CAAGCTAACTTTTCCACTTTTGTGAAATGCTTCtgaggtttttctttttt
gacagaTACAACTTTCTTGGGTTTGACCACATCGTTTGACTGGTTGTTCT
TTAACTTTAACTTTTGAATCTCGTTTCGAAGTGTTTGGATTGTTGCGTCT
TTTTCTTTCGTCAACGCAACAAGTTTCAGGTTGTGAtcattttccaaatc
tttaagTTTAAGTTTGTGATCATTTACCAAATCCTTGGTTTTTGTTTGGT
TGagattttccaaatctttaagTTTCAGGTTGTGAtcattttccaaatct
ttaagTTTAAGTTTGTGATCATTTACCAAATCCTTGATTTTTGTTTGGTT
Gagattttccaaatctttaagttttagtttgtaatcattttccaaatctt
taagTTTAAGTTTGTGATCATTTACCAAATCTTTAAGTTTAAGTTTGTGA
TCACTTTCCATATCTTTGATTTGAAGTTTGAAGTCGTTATCTTTTCCCAG
AATCTCCTGGTCTTTTGTCATCAGTTTCATTTTGCACTCGTTGTCCTTGG
TTGCAATCTCCTTGTCTTTCTCGTTCAGTTTTAACGTTGTCTCATCTACC
TTAGTTGCCATTTCCTTGTTTTTCATTACAagttgtttttccatttcatt
caGTTTATTTTGAAGCTCGCGGTCGGCTTGAATTTGTTTCAACTCTATCC
CATGTGAATGTTTCAAATTAAGCAGCTCCAATTGATGTGTTAAGTTGGCA
TTTTTCATTTGTGCTTCCATCAATTCAATCTTTGATTCGTAGGTcagttt
ttgaaattctttttgatgttcttctttcaacttttttatttcaacactAT
CAGATTTTTTCGGAGGATTTCTATCATTTGCGCTGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009090-exon-sc0000090-1491911889:172359..172836 | TCONS_00009090-exon-sc0000090-1491911889:172359..172836 | Clytia hemisphaerica | exon |
| TCONS_00009090-exon-sc0000090-1510915933:172359..172836 | TCONS_00009090-exon-sc0000090-1510915933:172359..172836 | Clytia hemisphaerica | exon |
| TCONS_00009090-exon-sc0000090-1575043694:172359..172836 | TCONS_00009090-exon-sc0000090-1575043694:172359..172836 | Clytia hemisphaerica | exon |
| TCONS_00009090-exon-sc0000090-1491911889:172969..173445 | TCONS_00009090-exon-sc0000090-1491911889:172969..173445 | Clytia hemisphaerica | exon |
| TCONS_00009090-exon-sc0000090-1510915933:172969..173445 | TCONS_00009090-exon-sc0000090-1510915933:172969..173445 | Clytia hemisphaerica | exon |
| TCONS_00009090-exon-sc0000090-1575043694:172969..173445 | TCONS_00009090-exon-sc0000090-1575043694:172969..173445 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000090 | supercontig | sc0000090:172359..173445 + |
Blast
The following BLAST results are available for this feature:
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