TCONS_00009044 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009044
Unique NameTCONS_00009044
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length299

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009044 ID=TCONS_00009044|Name=TCONS_00009044|organism=Clytia hemisphaerica|type=transcript|length=299bp
tcactccattaagaattagtgaataaggagAAAATAAATGTTCAATTTAA
TGTAAAGTGCATACACCATGGACTACCATCAATTGGTCagttaaaagttg
aaaatggcTAGTGAACAAGTTGAGCTGGTTTTATCCACACCGAGTTTATT
GCGAAATGTGAACCTCGACAGAAGGAGTTGCGAATTCAATCAAAGACCTC
ACTACTGTATCAACAAATGTAACATTCACTTGAAAAGACTGGAACAATTT
CTAATTGGcttcaaaaatgaagtttacaAACAAGAAATCAATCTCAAAG
Run BLAST on NCBI

transcript from alignment at sc0000089:7196..7494

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009044 ID=TCONS_00009044|Name=TCONS_00009044|organism=Clytia hemisphaerica|type=transcript|length=299bp|location=Sequence derived from alignment at sc0000089:7196..7494 (Clytia hemisphaerica)
CTTTGAGATTGATTTCTTGTTtgtaaacttcatttttgaagCCAATTAGA
AATTGTTCCAGTCTTTTCAAGTGAATGTTACATTTGTTGATACAGTAGTG
AGGTCTTTGATTGAATTCGCAACTCCTTCTGTCGAGGTTCACATTTCGCA
ATAAACTCGGTGTGGATAAAACCAGCTCAACTTGTTCACTAgccattttc
aacttttaactGACCAATTGATGGTAGTCCATGGTGTATGCACTTTACAT
TAAATTGAACATTTATTTTctccttattcactaattcttaatggagtga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005056XLOC_005056Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009044-exon-sc0000089-1491911889:7196..7494TCONS_00009044-exon-sc0000089-1491911889:7196..7494Clytia hemisphaericaexon
TCONS_00009044-exon-sc0000089-1510915933:7196..7494TCONS_00009044-exon-sc0000089-1510915933:7196..7494Clytia hemisphaericaexon
TCONS_00009044-exon-sc0000089-1575043694:7196..7494TCONS_00009044-exon-sc0000089-1575043694:7196..7494Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089supercontigsc0000089:7196..7494 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
36.6877	35.3144	37.8425	27.5263	0	3.07365	0	0	1.88328	5.03439	6.81211	2.08191	0	4.56338	1.49284	2.83664	2.18926	3.51872	2.52898	2.06308	5.33399	3.35934	28.1125	26.2616	0	0	6.05575	6.4917	15.5224	25.2763
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009044 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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