TCONS_00008989 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008989
Unique NameTCONS_00008989
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1377

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008989 ID=TCONS_00008989|Name=TCONS_00008989|organism=Clytia hemisphaerica|type=transcript|length=1377bp
GTAAAGTGACTAGACTAGCGCACATTTTGCTGAGAAGCCCGAACTTCAGA
ATCGGATGGTGCAAGAGTTCGAACCCCAGTAAAATCGTCAAATCTAAATA
ATTACCAACTATAATATTAAAATACTCAAAATGGCTCAATGGAAAGCCTT
AATTGAACCTGAAAAGGAAGTAATTGAGCGGGTTGTTAGTTTAACAAAAG
AATCTAGTGATGAAGAATGGAAAGATGTTGTTGAAGAAATGGCGCGCAGG
TATCTTTTCAAGCATTATCTTTGTAATTATGGAACAAATGAGGAGTCTCC
CTTCCCAAGCAAAATGTGGACCATCCAACATCATGCAGCTCACTTTAATG
CTCCTATTGAAATAATTGAATTCATGGTTGAAAAGCACTTTCCAATGTCT
TTCAAAGATGGCGAGGGCAAGACTCCAGCTGATCATCTTGATGTAAATGT
TGATTGCAATTATAAGGCATTGTTCATGCCTAGGTATGGcctttcaaatt
taaatttggagaatctgcaaaagattgaagaaaatttccatGCTGTGATT
AATGGAAGAGTCAAAGATTTGGTTGACAAGTATGACTTAATTCTCCCACA
GTTATCTGTTTCCCTAGAAGTTCAAGTAGCTATAGAATTTCTTGACAATG
GATATTGTGCTATCCCTGGGATGTATGGTGGTTTCACAATTGAATTCCAG
TTTAATGCAGATAAGAGTGATGTTGATCATCTCTTAACTAGCAGTTGGTG
TCGGATAGCAGGTGGCTCTGGTCAAACACACAAATGTACACCAGAACAGT
CAGAATTAATTGAATCAGGTTTTGCATAATGTTGAAGTTTAATATTCTTA
TAGGAATTTTTTATGCCTACTGTATTTTTAGATTATTCTCTTGTAGTAGT
TGAGTATTCAAATATAATAGCCATTCTTTTTCACTGTTCaacaaattaat
caaaaattttgagaaaggcaaatttttttctcagctaTTAAATTCATCAC
AAACAAATTAGCACAATATTTATACATTCATTAAAGAAAACCTGCTGCTG
TCATCGATTATCAGCTGATTTTGTACTTTAATCGAGTTTGTGATTGAGTT
TTTCTGACAAGTCTCACTCATACCattatttgaaatgttttaattttgag
actaaaaagtaattttaaacaaattttctcaaaccttattattttattat
tagcACAATGTAAAAGAACTGAATTATGATTTTTATACTGACTTTTTTTG
TAATCTAATTTACATATTATTTACATTTACACACTATTTATTATTTCTAA
AGTAATCACTATTTTAATATATCTCTGCCTTATTGTATTGTAAACGCATG
TAtaatcttttataaaaacaaaatttc
Run BLAST on NCBI

protein sequence of TCONS_00008989-protein

>TCONS_00008989-protein ID=TCONS_00008989-protein|Name=TCONS_00008989-protein|organism=Clytia hemisphaerica|type=polypeptide|length=232bp
MAQWKALIEPEKEVIERVVSLTKESSDEEWKDVVEEMARRYLFKHYLCNY
GTNEESPFPSKMWTIQHHAAHFNAPIEIIEFMVEKHFPMSFKDGEGKTPA
DHLDVNVDCNYKALFMPRYGLSNLNLENLQKIEENFHAVINGRVKDLVDK
YDLILPQLSVSLEVQVAIEFLDNGYCAIPGMYGGFTIEFQFNADKSDVDH
LLTSSWCRIAGGSGQTHKCTPEQSELIESGFA
Run BLAST on NCBI

transcript from alignment at sc0000089:290524..307938+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008989 ID=TCONS_00008989|Name=TCONS_00008989|organism=Clytia hemisphaerica|type=transcript|length=17415bp|location=Sequence derived from alignment at sc0000089:290524..307938+ (Clytia hemisphaerica)
GTAAAGTGACTAGACTAGCGCACATTTTGCTGAGAAGCCCGAACTTCAGA
ATCGGATGGTGCAAGAGTTCGAACCCCAGTAAAATCGTCAAATCTAAATG
TAAGTATTCATCTCTTTTCAAACATAACCTATATTTTGTAAATCCTCCAT
TACATAAATTTAACAGAATGGTCGGTCGGATATGTTTGGACGATTTATTA
TTGAGTGTCACAAATCCTACTTTTTAATATTCATAAGTTGCTTTTTACTA
TTGCTATTGGATTCGATTGGGATTGGTTTTcaaagaataagtttttttca
agtcagaagTTTATAATAGTTGAAAGCTCCTAACTTAAATAAAGTCTAGT
CAGAAAATTTTCTATATACTATCTTTGCTTTCTGACTTCCCCCATCAGAA
TTATTAAAGAcaaaaaagtagttgagcttcAGTATATAAATAAAGTCttt
tccagacgatctcaatcgaacggaatcgacgatcgaaccagtcgaaccaa
atcgaacgccatcgaccgattgaaattcgattgtggaacgcaatcgaatc
tcaattgaacgtcaaaattctcgGTAATaatcgattggttcgattgttgt
ttgacTGCATTCGATTGTCGTTCAACTGCGTTCGATTGCCGTTTAATCGC
CTTTCGACTGCGTTTGATTGCTCTATGCTCTAAAGAAGGCCAATTTTCCA
TCGTAAATAAAAGAAGAGTGTTTTTCAGTACTTggcaagaaaatagagca
aattttatggattttattTTATGGATAGCAAAACAGATGCGTGTGCATTA
GGTATTTGATGCCCCATTTGACATATTTTCAGTGTTTTCAAACTATGCTC
AGCAGTTCAAACTCAGATAATTCTCTTGGTCCAACAACCCTGTTGATGCA
GCAGACTGTCCAGGACTGCCTTTTAAGGGCAATAAAAAAGCATTGTTAGA
ACAAACAAATGAAAGTAACAGAGAAAGGTGCAGAAGCGTGGTGGCTCAAC
CAAAATTCAGGCAAACTGGAGAGGcaatttgtgaaaattttgattttggc
gccccctattaaaagtaaatattttattCGCAAACACCAAAATCTTTGGG
TACTTTCTCTCTTTTAGGTCAAAAACTGCCAGGTGTAACGGTGTAACAAG
CAAATTAGTGATAAGAGGCGCATTTTGGCACTCCCCAAAAATATCGGTCG
CTGGGGGGTGCACTACCCCCTGCCACCATGCCACCATGCTACTGGTCGTT
TCCCaccaccaaaaatcaaaattttttcagttcCCCTAGgtccccccctc
ttttttgccttCCCCCAGTTATTTGACAATTCTGCGGTTCTCCCATAttg
ttaacataaaaatgctttaaatcaagtttaaaaTTTTGGAAAGTTTGTAA
ATATAGCCTTGAAGCTGCTTGAAAatgaagttttattgaaaaattggttt
TGTTCAAGTAAggtttgctgattttattgcaTAAACAGGTCTTCTATGAG
ACTACGTTGAGATCAGTAAagttcaatcaaaatttccaaaatttattgtt
tattttctcCCTTccaatttccaatttttcattttcccccataccTCCAA
AAATGGGGCAAAATCTATTCCTACAAAGAAAATCAACGAACCAAGCAAAA
CACACATACAAGTTTTGTATTTCTGAtgcttaaaaagaaaattcaagaca
gtaagaaaattctaaaaattttacaaaaagaaattttgcagcCGGCCaga
taagtttttttttcaaacgcATTTccagaaacaattttttttggccTTCA
TACTTGTCTGAAATATtcagttcaaaatttttttcttaaattcttcCACA
GCACAAACAACATTTTTTAGGCCTGTCttctctcaaaaaagttcacccTG
TCGATTTCTGGAAACAAGACAATCTTTATTTTTGCCTTACATCTAGCGTT
TGGATTGTCCTgtggtaaaaattttgaaaattcaacacCAGAAATTTCGT
ATCTTATGCTTCCATAAGTCCAGTGTGACAGCAGAGTTGTTTGGTTCAGT
AGTTTTGCAGAATGTTAAAAAATGGGCATTGAATAGGAGACTCTTGCATG
TCAAAATTCTCATACACCTCTCTGCAATGTGCAGAGTGTTTCACACATCT
CCAACATTTACCATATCTATAATATCATTTAAGTAGTTTTGCAGAATGTT
AAAAAATGGGCATTGAATAGGAGACTCTTGCATGTCAAAATTCTCATACA
CCTCTCTGCAATGTGCAGAGTGTTTCACACATCTCCAACATTTACCATAT
CTATAATATCATTTAAGTAGTTTTGCAGAATGTTAAAAAATGGGCATTGA
ATAGGAGACTCTTGCANgggggggggggggcactacAGTTATTTGACAAT
TCTGCGGTTCTCCCATATTGTTAacataaaaattctttaaatcaagttta
aaatttttggaaagtttgtaAATATAGCCTTGAAGCTGCTTGAAAatgaa
gttttattgaaaaattggtttTGTTCAAGTAAGGCTTGCTGATTTTATTG
CATAAACAGGTCTTCTATGAGACTACGTTGAGATCAGTAAagttcaatca
aaatttccaaaatttattgtttattttctcCCTTccaatttccaattttt
catttcCCCCCATACCTCCAAAAATGGGGCAAAATCTATTCCTACAAAGA
AAATCAACGAACCAAGCTTTATTTTTGCCTTATGTACATCTAGCGTTTGG
ATTGTCCTgtggtaaaaattttgaaaattcaacacCAGAAATTTCGTATC
CTATGCTTCCATAAGTCCAGTGTGACAGCAGAGTTGTTTGGTTCAGTAGT
TTTGCAGAATGTTAAAAAATGGGCATTGAATAGGAGACTCTTGCATGTCA
AAATTCTCATACACCTCTCTGCAATGTGCAGAGTGTTTCACACATCTCCA
ACATTTACCATATCTATAATATCATTTAAGTAGTTTTGCAGAATGTTAAA
AAATGGGCATTGAATAGGAGACTCTTGCATGTCAAAATTCTCATACACCT
CTCTGCAATGTGCAGAGTGTNgggggggggggggcactacAGTTATTTGA
CAATTCTGCGGTTCTCCCATATTGTTAacataaaaattctttaaatcaag
tttaaaatttttggaaagtttgtaAATATAGCCTTGAAGCTGCTTGAAAa
tgaagttttattgaaaaattggtttTGTTCAAGTAAGGCTTGCTGATTTT
ATTGCATAAACAGGTCTTCTATGAGACTACGTTGAGATCAGTAAagttca
atcaaaatttccaaaatttattgtttattttctcCCTTccaatttccaat
ttttcattttcccccataccTCCAAAAATGGGGCAAAATCTATTCCTACA
AAGAAAATCAACGAACCAAGCAAAACACACATACAAGTTTTGTATTTCTG
Atgcttaaaaagaaaattcaagacagtaagaaaattctaaaaattttaca
aaaagaaattttgcagcCGGCCagataagtttttttttcaaacgcATTTc
cagaaacaattttttttggccTTCATACTTGTCTGAAATATtcagttcaa
aatttttttcttaaattcttcCACAGCACAAACAACATTTTTTAGGCCTG
TCttctctcaaaaaagttcacccTGTCGATTTCTGGAAACAAGACAATCT
TTATTTTTGCCTTACATCTAGCGTTTGGATTGTCCTgtggtaaaaatttt
gaaaattcaacacCAGAAATTTCGTATCTTATGCTTCCATAAGTCCAGTG
TGACAGCAGAGTTGTTTGGTTCAGTAGTTTTGCAGAATGTTAAAAAATGG
GCATTGAATAGGAGACTCTTGCATGTCAAAATTCTCATGCACCTCTCTGC
AATGTGCAGAGTTTCTCACACATCTCCAACATTTACCATATCTATAATAT
CATTTATatcatttacaaattttgtaatATCACAGAAAAAAGCCCCAGGT
TTGGaatgaaaacaaccaaaaacaccaTTTCTCAAAGCCAAAGACCATAA
AGTTCTCTAATGCATTTGCATTTGCACCGACTAATATTAATCCTGAGAAA
ATAGCATCACAGGCTAGCTCTCAATTGTGAATGTCGCttgtttgtatttt
ccaaggaaaatgatTCAGTCGTATTAATCTAGGTATGATTCCCTTGTATT
CCCAAAGGAAAATGCTTCTcatgcagggggggggggtcggtactaaaatc
caagacatatatgagtactacaagttttttgacaatttttgacatacccc
cacctaattTTTGAATTGACATTTTAGCATAGTGACCACCTAAATAAGGC
TTATTTTGGAATTCCGTTTGAAGAATGCAGGTCTttggactttcaacaaa
atgccAACTCTGGTTATTTAAGCTGTCAATGAACCTGATCTATCTCTATC
TCTTCTAGATAAAGACTCAGAAACAGTCAAGACACTTTTGCTCTGCTCTA
CTTTAGTTATTGCAAAGATTGTTTGGTTATTTTTCACCTCTAATTTACag
cttgttattttttttctatccagttatccacggttctttacaaaaaaaca
aagcattcaacttcgaaaacattttttattccataGTATATAAAAGCAGA
ACAATTAAATTGAAACATGGGTGTTTCACAGCCCCAAAggaacctttttc
ctcagttgagataaaatttcctattgagatgctaatggggatagaaattc
tattgttccaaggttaaaaactcAGTGGGgatatggttttggagtgcaat
ttttaaacatggaattttgagttgggatgaaatcaaagtctattttcaag
tggggctgaaattcaagagTATTTTACCAcaggggacaaaatttttgctt
aatttgtgacacagggacgtatttaaatcttatatagagagtttttattt
tttaattttgcctaTAATGCTCAGTCAATTCTCAACTTcaattgagctag
aatctgagaatgtctgtctgtgtgtgtgtctgtgtgtgtgtctgtcacca
aaactttggggcagactggagacttcaaaaatggtccgattgggctgaaa
ttttgcacacttgatccttgggcaaatccctgggggttgtttttttcatt
ttttcaaaattttaattttttggggcctggggacgagttttttgccaaaa
cgaggctaaaactttggggcaggctggagacttcaaaaatggtccgattt
ggccgaaattttgcacacttgatccttgggcaaatccctgggagtgtttt
tttcattttttcaaaattttaatttttggggcctagggaCAGGTTTTCGC
CAaaatgaggctaaaactttggggcaggctggagacttcaaaaatggtcc
gatttggctgaaattttgcacacttgatccttgggcaaatccNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcgccaaaacgaggct
aaaactttggggcaggctggagacttcaaaaatggtccgatttggctgaa
attttgcacacttgatccttgggcaaatccctgggggcctttttttcatt
tttttcaaaattttaatttttggggcctgtagacgagtttttcgccaaaa
cgaagctaaaacccaaaatgctataatttttcttaagccattaagtttac
aattgggcctacgaatgatttcaaagatactgaagttgagccagtgcggt
tagcacgttcgacagtagttaaatttcctaaaattaggTGGTTtttttta
gtactcatgtactaaaatttttcttaaatttcttgaagaccccacctaat
ttgggattttagtatacatggtactaaaatacttttaggctttttttgta
ataccaccacgtcactaaaagtcatgatgtctgaaattttagtaccgacc
cccccccctttctctTGTTCTTTTAGAGGTAACTAATTCACttgtatttt
ctgaggaaaatcaATCacttgtatttcccaaggaaacaTTAATGTGATTT
TTTAAAGGAGTTATCTCCTTAAATCTACCTACCAGACTTTGACAACCAAA
GAGATCTTTTTGGTAAAAATGATGCATACAAGGGATGATTAACATACATC
AACATTGTAATAGCTGTTCCTCGAAACAACATCCTGTAATCAATTACTTG
TTCCACTTTAAAAGACAACATCACAACNTTTGGTAAAAATGATGCATACA
AGGGATGATTGACATACATCAACATTGTAATAACTGTTCCTCAAAACAAC
ATCCTGTAATCAATTACTTGTTCCACTTTAAATGACAACATCACAAGCCA
AAGGCTATGGAATTATTGACAAGCTGAGATATTCATGACAACTCATTCCA
GAATAATTCATTATCAGGTCAACATTCAAAATGTTCAATGTCACCTCCAG
TGTTCATATCTTGCATCCTATCAGCATGCTATCATCAAGGTACAGTCACA
AATCCATTACACCACATACAAGCATACCAGATAACATGAAATAACAATTC
TGAAGCTGATTATTTCTCATCTAGATCCAAAATGTCTTGGATTGGGTTCC
TTCAATTTCCAAATGAAGTCACACATTTGATCGAAAATATAATACCCAAT
TTGAATGAAAAGGCTACAACAGAACAATGGAATGAATGTCTTNCATCACA
AGCCAAAGGCTATGGAATTATTGACAAGCTGAGATATTCATGACAACTCA
TTCCAGAATAATTCATTATCAGGTCAACATTCAAAATGTTCAATGTCACC
TCCAGTGTTCATATCTTGCATCCTATCAGCATGCTATCATCAAGGTACAG
TCACAAATCCATTACACCACATACAAGCATACCAGATAACATGCAATAAC
AATTCTGAAGCTGATTATTTCTCATCTAGATCCAAAATGTCTTGGGTTGG
GTTCCTTCAATTTCCAAATGAAGTCACACATTTGATCGAAAATGTAATAC
ccaatttgaatgaaaaagctACAGCAGAACAATGGAATGAATGTCTCTAT
GGTCTAAAGAAATACAGAAAACACTACATTTGGAATGAAGACATAAAAAA
TGATCAAAGAGTTTATCCAAGTAGGCGCTGGACCATCGTCCATCATGCCG
CTTATTTCAAAGCACCTTTACCAATTGTCCAGAAGATGGCTATCGATCAA
TATCCTCTTTCATTACCAGACGGAGAAGGAAAGTTACCAATTGATCATTT
GGATTCAGGCAcgccaaaaaatatcaaagcttTGTTTTCACCATCTTACA
AGATGAATTTCCTTCACTTGGAGATGAAATTGTTGCAGGCAAATTTTCAT
GAAGTCATTCTGGAAAGAGTTGCTTCATTGGTTCAGAAGTATAATGTGAT
TTTACCAATCCTGTCAGTCCTTTTAGAAGACGTTTCAAAGGATAAAGAAG
TTTACTTCAATATGCCTGGAATGTATGGTGGATTCACATATTGGCTTGAG
TTTGATTCTTCTAAAACAGAAATTTTGGCATTGTATTCACGGAGTTCTTC
AAGGCTTGTTGGTAATTCAGAACAGTTACATAAGTGCACCAAAGAAGGAT
GGACACTGGTCAAAAGTGACAAGTAATGGTTTCCTTAATCTTAAGATTTA
TTTTCTCTTTAGTTTTATAGCTTTGTTTTTAAGTTTAATTATACATCtgc
ttcatttaaaaatttcttcattataACTTTCCCTGtgagaaatcttttaa
aagtcaTTATCTTATTGTGTTAAAGTTTAAATTTATCTACAAACAAATAC
AAACTCTTATTTTATGCCTAATTTTTAATGATTGACTCTCCAAGCAATTT
GAAATACCTGAAAATTTAACCAGTTTTGGGGCAGTCTTTTAAGGGACAAT
AGTAAATGACCTGTTGAGATTAAGACTGGCTCTATCAACTCTtaagaatc
tttaaagaaattggTTGTCGATGTCATTGTTTAGTAAAAGCGTTTTGTAA
TCTGTCCAAATCAGATTTTTGATGGTCCAAAGGCTGACCTGAAAAGTAAT
CAGATTTTGAATTTCCACTCTCAAGGTTTTGGACCTTTATTTATTCAAAC
CTAATTTAAACCCTATTTAGACataaatttatttaaaacaaatttattta
ttgCAAATAATTATTAgtaacattttcttttcttttatgcTTAATTATTT
ACCgaaatttattttatcatttacCTTTTTGAAATGTAAAGAAATTAAAG
ATGTGATTTTTCTAACAAAATTGTGATTTTTCGTAATTTCATTTTTGGTG
TCTAAAGCTTTGAAATTACTTTAAGTCAATCAAAAGTTTTAATTATcgca
ttgaaaaaaaaaaatacaaaatatactTCTATTTTATTTATTGAAGTGGT
CTGACACTTGGGACACACCCTGACACTTTGGAACATCCTGTATGCATCTA
ATTTCTTAAATATTTCTTCCAAAGAATTACCCACTATAATATTAAAATAC
TCAAAATGGCTAAATGGGAAGCCTTAATTAAACCTGAAAAGGAAATAATT
GAGCAGGTTGTTAGTTTGACAAAAGAATCTAGTGAAGACGATTGGAAAGA
TGTTGTTAAAGAAATGGTGCACAAGGACCTTTTCAAGCGTTATCTTTGCA
ATTATGGAACAAATGAAAAGTCTCCCTTCCCAAGCAAAATGTGGACCATC
CAACATCATGCAGCTCACTTTAATGCTCCTATTGAAATAATCGAATTCAT
GGTTGAAAAGCACATTCCAATGTCTATCAAAGATGGTGAGGGCAAGACTC
CAGCTGATCATCTTGATGTAAATGTTGATTGCAATTATAAGGCATTGTTC
ATGCCTAGGTATGGCCTTTCAAACTTAAATTTGGAGAATCtgcaaaagat
tgaagaaaatttccatGCTGTGATTAATGGAAGAGTCAAAGATTTGGTTG
ACAAGTATGACTTAATTCTCCCACAGTTATCTGTTTCCCTAGAAGTTCAA
GTAGCTATAGAATTTCTCGACAATGGATATTGTGCTATCCCTGGGATGTA
TGGTGGTTTCACAATTGAATTTCAGTTGAATGCAGATAAGAGTGATGTTA
ATCATCTCTTAACAAGCAGTTATTGTTGGATAGCAGGTGGCTCTGGTCAA
ACACACAAATGTACACCAGAGCAGTCAGAATTAATTGAATCAGATTTTGC
ATAATGTTGAAGTTTAATATTCTACAGGAATTTTTTGTGCCTTTAGATTA
TTCTCTCGAGTAGTTAAGTAttcaaattaatcaaaaatcCGATACATGTC
GGGAAAAATGGAAGTATAATAGCCACATATTTTTTCACTATTCaacaaat
taataaaaaattttgaggaaggcaaatttttttctcagctaTTTAATTTA
CCATAAATAAATTAGCACAATATTTATACATTCATTAATGAAAAACTGCT
GCTGTCACCGATTATCAGCTGATTTTTTACTTTCATTGGGTTTGTGATTG
AGTTTTTCTGACAAGTCCCACTCATACCattatttgaaatgttttaattt
tgaaactaatactttcgcggggattaaattttgataGTATATAGTTTACG
CTGTATTATTTTAATTTCTTGAAACTAAAAAACAATCTATTCCTACAAAG
AAAATTAACAAACCTAGCAAAACACATACAAGTTTTGTATTTCTGatgct
taaaaagaaaaatcaagactgtaaaaaaaaatctaaaaatctaaaatgaa
aatattttgcagcCAACCAGTttaatgtaaagagatggaaaaacagcttc
ttcagAACAATAGACAAACGGCTtgtcatataccaggtcctttgccctta
agggagtttgtttcgagctacatgttttttttataagcattgcacttata
agcatatctaggctcagatatggggaaaaattaagcatatcgCAAGCATT
AATTgggcctacgaaaaatgtttttttcctgattgggcccttccagaaaa
aatccgttcatggggggtggaggatgaattgtccaggggtattgaaaaaa
taccaaaaaattgcaatgtccagggggtgaattccaatgtccaggggtaa
ttttttgtgtccacgggattgatttgatgtttgtccaggggtataaccca
tgttcagggggttaaaaatcaaaatgtccaggggtaattcatgaagaaaa
taatatatcctccaccccccatgaacggattttttctggaagagcccatt
ttggctttttttggctggaattttacggattttcagtatttccctaaatt
tatgctttggATTTAAGCATCCCttaagcatttttcagctttattaagct
ttcgacctaagcatctctgagcctgttttcggatttttgtatggttaggc
aattacttttttattttctggtttacggacattataaggaaaagttttgg
acaggaggatggaaaaaaaataaaaataaaattgatgtttaaaatttttt
ttatttcctttttaaaaatctgaaatcggaggaaagaataaaataaaatt
tcatgaaatttcctAAAGTAtagattttttagatttaaagacaaaagaat
AGATGCAAGAAAAGTGCAAAATGTTGTTATAGATAGAGTCTATggataaa
aaacactaaaaataaaCTGAACCATAAAAATGTACACATAAAGACTGATA
TGTGTATATGTTAAACTGACAAAGGTTCCCATTTAGGGTTCACCCCtagg
gttcccactttagggttcccacttaggttcccccatcccattTTTCTGGT
ATGCCTATTTTTATATCTACTCTTGAATTTTAACAATCACATCAGGGGGG
GTCAAGCCTCAGGGTACTAAAGCATAGCCTAGAGAGGGTACTTatctaaa
aaagtttttgactCATACCACCCACCCAaataagtacccgggtacttaag
gACTTTTCCTTCTTAGACCCTATacctacaaaaaataaatttattactTA
TTAATCTTTCTCAATTCTACACTCATCAAAATTAAACCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGGCTCCCCAcccacccaaaaagtacccgggtact
tatcaaattttttttggaaaaacaccCACCCCACCGGCTATGCTTTAGTA
CCCTGAGGCTTGACCCCCCCTGATCACATAAAGAACTTTAAATAAAAGCG
attacaaaagaaagaaaaaaaatgaagaaaagtttgtttttttgtggaTA
GGGAAATTCCATAGGGAAGTTCCCTGACATTAAGGGAAGGATCAAAGTAT
CTTTACATTGGCAGAATAGGGCACAGCTGTGTTAGATCATTTAACTCCCT
CTCTCTcattctcttcttttcttttgttttcctgttttaAGTAtaggttt
tttatttatttcttcttttttgaaggtcggaggagaaaaagtaaataaaa
gtttttgaaatctctattttattatttttttattttggcaaaaataacgt
CGGCGGATCCataaaccaataaataaaaaagtatttgccttataaaaaaa
aaacatgtaatggatttcttttgttgttgctttaaaaaagttgtataatt
aGCGTGGTATGACGAAATTCTTATGTTTTAGGTCGAATTATGCATAAACT
ttaggggcttatattttggggagacctcttttatatcaaaagatacctat
attttcttgctcagaattttctaGCAATTCTAATGATACAAGGGCTATAA
TGAAAATTTCCTTCCGACACTAAATTTTTCCAGAGAGGTGTACAAATGGT
GcaaaatctaagaaaaattaGGACCTGCCTTGGTATTAAATGTCATTTTC
CCATAGCATAAGCCTAATTAAAACTAAATCAAATATTAACGGGtgttttt
gtaaactttttattATTGACCTAAATGATGACCAATTTTCAAATAGCCCC
TATAACAGCATCATGACTGCATAATTATATTAAAAGCTAACAAAGTGcac
gaaaataagaaatcaaatctgtctttgatgaatttctatcaaagttttta
gaaataatttggtatcattgtgatgagaatttttcagACTTCAATTGTGA
ATGGTGTttgtttgtattttccaaggaaaagaaaatttgtattttccaag
gaaaatgataCAATTGTATTATCCTAGGAAAATGATTCCCTTGTATTCCC
AAAGGAAAATGCTTCTCTTGTTCTTTCCAAGGTAACTTTCACTTGTATTC
ACttgtattttctgaggaaaatcaATCacttgtatttcccaaggaaactT
TGTTGTGGTGTTTTAAAGGAGTTAAATCTACCTACCAGACTTTGACAACC
AAAGAGATCTTTTTGGTAAAAATGAAGCATACAAGGGATGATTAACATAC
ATCAACATTGTAATAACTGTTCCTCAAAACTACATCCTGTAATCAATTAC
TTGTTCCACTTTAAAAGACAACATCACAAGANCCTCAAAACAACATCCTG
TAATCAATTACTTGTTCCACTTTAAATGACAACATCACAAGCCAAAGGCT
ATGGAATTATTGACAAGCTGAGATATTCATGACAACTCATTCCAGAATAA
TTCATTATCAGGTCAACATTCAAAATGTTCAATGTCACCTCCAGTGTTCA
TATCTTGCATCCTATCAGCATGCTATCATCAAGGTACAGTCACAAATCCA
TTACACCACATACAAGCATACCAGATAACATGAAATAACAATTCTGAAGC
TGATTATTTCTCATCTAGATCCAAAATGTCTTGGATTGGGTTCCTTCAAT
TTCCAAATGAAGTCACACATTTGATcgaaaatataatatatacccaattt
gaatgaaaaagctACAACAGAACAATGGAATGAATGTCTTTATGGTCTAA
AGAAATACAGAAAACACTACATTTGGAATGAAGACATAAAAAATGATCAA
AGAGTTTATCCAAGTAGGCGCTGGACCATCGTCCATCATGCCGCTTATTT
CAAAGCACCTTTACCAATTGTCCAGAAGATGGCTATCGATCAATATCCTC
TTTCATTACCAGACGGAGAAGGAAAGTTACCAATTGATCATTTGGATTCA
GGCAcgccaaaaaatatcaaagcttTGTTTTCACCATCTTACAAGATGAA
TTTCCTTCACTTGGAGATGAAATTGTTGCAGGCAAATTTTCATGAAGTCA
TTCTGGAAAGAGTTGCTTCATTGGTTCAGAAGTATAATGTGATTTTACCA
ATCCTGTCAGTCCTTTTAGAAGACGTTTCAAAGGATAAAGAAGTTTACTT
CAATATGCCTGGAATGTATGGTGGATTCACATATTGGCTTGAGTTTGATT
CTTCTAAAACAGAAATTTTGGCATTGTATTCACGGAGTTCTTCAAGGCTT
GTTGGTAATTCAGAACAGCTACATAAGTGCACCAAAGAAGGATGGACACT
GGTCAAAAGTGACAAGTAaaagttttcctttttcttaatatttagTTTCT
TTTTAGTTCCTAGActtattttaataaatttgatTATAATACATTTGCTT
CATTTAAAAGTTACTTCATTACAAATTTCTTTGtgagaaatcttttaaaa
gttatTATCTTATTGTGTCAAAGTTTaaatttatgtaaaaacaattataa
acaCTTAATATTTTATGCCTAATTTTTAATAAGTGACTCTCCAAGCAAtt
ttaagtacctgaaaatttAACCAGTTTTTGGGCAGTCTTTTAAGGGACAA
TAGTAAATGATCTGTTGAAATTAAGACTGGCCTCTATCAACTCTTAAGAA
TCTTTAAAGGAATTCGTTGTCAATGTCATTGTTAGTAAAAGCATTTGGAA
TCCGTCCAAATCAGATTTTTGATGGTCCAAAGGCTGACCTGAAAAGTAAT
CGGATTTTGAATTTCCACTCTCAAGGTTTTGGACCTTTATTTATTCATGA
AGGTAATACAGatacagatggagagaaaacgtctcggtaatgacctaaat
ggtcgttgaaatcttttataaatctattcaaagcggcttttctttgatgt
accatcattggaagcaaaaacatcaatttataacttcNNAAGAGGCTGgt
ccgttgattttgaaaaatttaattttgcgagaaatcttagttaaaatgcg
attcgaaatagtttcaactgatttaaggataaaagaatatattaatttta
taaggatatatttttgggctggcattttgtgaacattgagagtcgcatca
cattatcattgaaagtttcttatcttaaaatcttcacgtctaagtgggca
gcggttttcatactcttacaaaatgatcgatacaaggttcctaatcgtaa
cctgtcgtaacacgtaattctttttaaaatctatcgatggctttatgggt
agcttcccctagaagtttggagtattgtgcttattatgtgaagttttttt
caatttttcatgacgtAAGGCTATTataatatttcaatatacttgttaaa
aatgtaatgtcttttcattcatcttgaATATTCctacgagtatacccaaa
atttatcatcttattcccaaagcaaccaaacagctgtttgcttccgatga
taaatcagaatagaacaaaaggcattgagtctccatctatctttattacc
ttcatgattTATTTAAACCTAATTTAAACCTTATTTAGACCtaaatttat
ttgaaacaaaCTTGTTTGTTGCAAATAATTATTAATAacattttctttac
ttttatgcATAATTATTTACCgaaatttattttatcaatACCTTTTTGAA
ATGTAAAGAAATTAAAGATATGCTTTTTGTAACAAAATTGTGATTTCTTG
TAAACgtaatttcattttcagtgtataaaactttgaaattgctttcagtc
aatcaaaagttttaattaccattgcaatgaaaaagaaatacaaaatattt
tttttttttatttacagaaGTGGTCTGACACTTTGGGACACCCTGTATGC
ATCTAATTTCTTAATATCTCTGAATCTTCTTCCAAAGAATTACCAACTAT
AATATTAAAATACTCAAAATGGCTCAATGGAAAGCCTTAATTGAACCTGA
AAAGGAAGTAATTGAGCGGGTTGTTAGTTTAACAAAAGAATCTAGTGATG
AAGAATGGAAAGATGTTGTTGAAGAAATGGCGCGCAGGTATCTTTTCAAG
CATTATCTTTGTAATTATGGAACAAATGAGGAGTCTCCCTTCCCAAGCAA
AATGTGGACCATCCAACATCATGCAGCTCACTTTAATGCTCCTATTGAAA
TAATTGAATTCATGGTTGAAAAGCACTTTCCAATGTCTTTCAAAGATGGC
GAGGGCAAGACTCCAGCTGATCATCTTGATGTAAATGTTGATTGCAATTA
TAAGGCATTGTTCATGCCTAGGTATGGcctttcaaatttaaatttggaga
atctgcaaaagattgaagaaaatttccatGCTGTGATTAATGGAAGAGTC
AAAGATTTGGTTGACAAGTATGACTTAATTCTCCCACAGTTATCTGTTTC
CCTAGAAGTTCAAGTAGCTATAGAATTTCTTGACAATGGATATTGTGCTA
TCCCTGGGATGTATGGTGGTTTCACAATTGAATTCCAGTTTAATGCAGAT
AAGAGTGATGTTGATCATCTCTTAACTAGCAGTTGGTGTCGGATAGCAGG
TGGCTCTGGTCAAACACACAAATGTACACCAGAACAGTCAGAATTAATTG
AATCAGGTTTTGCATAATGTTGAAGTTTAATATTCTTATAGGAATTTTTT
ATGCCTACTGTATTTTTAGATTATTCTCTTGTAGTAGTTGAGTATTCAAA
TATAATAGCCATTCTTTTTCACTGTTCaacaaattaatcaaaaattttga
gaaaggcaaatttttttctcagctaTTAAATTCATCACAAACAAATTAGC
ACAATATTTATACATTCATTAAAGAAAACCTGCTGCTGTCATCGATTATC
AGCTGATTTTGTACTTTAATCGAGTTTGTGATTGAGTTTTTCTGACAAGT
CTCACTCATACCattatttgaaatgttttaattttgagactaaaaagtaa
ttttaaacaaattttctcaaaccttattattttattattagcACAATGTA
AAAGAACTGAATTATGATTTTTATACTGACTTTTTTTGTAATCTAATTTA
CATATTATTTACATTTACACACTATTTATTATTTCTAAAGTAATCACTAT
TTTAATATATCTCTGCCTTATTGTATTGTAAACGCATGTAtaatctttta
taaaaacaaaatttc

Coding sequence (CDS) from alignment at sc0000089:290524..307938+

>TCONS_00008989 ID=TCONS_00008989|Name=TCONS_00008989|organism=Clytia hemisphaerica|type=CDS|length=699bp|location=Sequence derived from alignment at sc0000089:290524..307938+ (Clytia hemisphaerica)
ATGGCTCAATGGAAAGCCTTAATTGAACCTGAAAAGGAAGTAATTGAGCG
GGTTGTTAGTTTAACAAAAGAATCTAGTGATGAAGAATGGAAAGATGTTG
TTGAAGAAATGGCGCGCAGGTATCTTTTCAAGCATTATCTTTGTAATTAT
GGAACAAATGAGGAGTCTCCCTTCCCAAGCAAAATGTGGACCATCCAACA
TCATGCAGCTCACTTTAATGCTCCTATTGAAATAATTGAATTCATGGTTG
AAAAGCACTTTCCAATGTCTTTCAAAGATGGCGAGGGCAAGACTCCAGCT
GATCATCTTGATGTAAATGTTGATTGCAATTATAAGGCATTGTTCATGCC
TAGGTATGGcctttcaaatttaaatttggagaatctgcaaaagattgaag
aaaatttccatGCTGTGATTAATGGAAGAGTCAAAGATTTGGTTGACAAG
TATGACTTAATTCTCCCACAGTTATCTGTTTCCCTAGAAGTTCAAGTAGC
TATAGAATTTCTTGACAATGGATATTGTGCTATCCCTGGGATGTATGGTG
GTTTCACAATTGAATTCCAGTTTAATGCAGATAAGAGTGATGTTGATCAT
CTCTTAACTAGCAGTTGGTGTCGGATAGCAGGTGGCTCTGGTCAAACACA
CAAATGTACACCAGAACAGTCAGAATTAATTGAATCAGGTTTTGCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005035XLOC_005035Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008989-proteinTCONS_00008989-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008989-exon-sc0000089-1491911889:290524..290622TCONS_00008989-exon-sc0000089-1491911889:290524..290622Clytia hemisphaericaexon
TCONS_00008989-exon-sc0000089-1510915933:290524..290622TCONS_00008989-exon-sc0000089-1510915933:290524..290622Clytia hemisphaericaexon
TCONS_00008989-exon-sc0000089-1575043694:290524..290622TCONS_00008989-exon-sc0000089-1575043694:290524..290622Clytia hemisphaericaexon
TCONS_00008989-exon-sc0000089-1491911889:306661..307938TCONS_00008989-exon-sc0000089-1491911889:306661..307938Clytia hemisphaericaexon
TCONS_00008989-exon-sc0000089-1510915933:306661..307938TCONS_00008989-exon-sc0000089-1510915933:306661..307938Clytia hemisphaericaexon
TCONS_00008989-exon-sc0000089-1575043694:306661..307938TCONS_00008989-exon-sc0000089-1575043694:306661..307938Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089supercontigsc0000089:290524..307938 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.30536	1.85151	0	1.68937	12.257	11.7018	11.195	7.19171	1.56047	2.90996	1.02146	1.19901	0	1.9987	0.511771	0	4.21968	3.38466	1.83494	1.71059	2.30033	0	2.04201	2.27281	2.51828	2.86045	0.908145	1.37681	1.45303	1.76597
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008989 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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