TCONS_00008936 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008936
Unique NameTCONS_00008936
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length162

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008936 ID=TCONS_00008936|Name=TCONS_00008936|organism=Clytia hemisphaerica|type=transcript|length=162bp
GCATAACGTAAATTATTTTACTCTGGAACAAAAGAAAACACATTAATCGT
CATGGCATCGTTGCTCCCGTGACAATTGATGTGATTTCtcaactttttaa
cattttctttataaattgTAGATACTTTTTCATATGcttatgtatttttt
actgtACTGACG
Run BLAST on NCBI

transcript from alignment at sc0000088:443800..443961

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008936 ID=TCONS_00008936|Name=TCONS_00008936|organism=Clytia hemisphaerica|type=transcript|length=162bp|location=Sequence derived from alignment at sc0000088:443800..443961 (Clytia hemisphaerica)
CGTCAGTacagtaaaaaatacataagCATATGAAAAAGTATCTAcaattt
ataaagaaaatgttaaaaagttgaGAAATCACATCAATTGTCACGGGAGC
AACGATGCCATGACGATTAATGTGTTTTCTTTTGTTCCAGAGTAAAATAA
TTTACGTTATGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005015XLOC_005015Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008936-exon-sc0000088-1491911889:443800..443961TCONS_00008936-exon-sc0000088-1491911889:443800..443961Clytia hemisphaericaexon
TCONS_00008936-exon-sc0000088-1510915933:443800..443961TCONS_00008936-exon-sc0000088-1510915933:443800..443961Clytia hemisphaericaexon
TCONS_00008936-exon-sc0000088-1575043694:443800..443961TCONS_00008936-exon-sc0000088-1575043694:443800..443961Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088supercontigsc0000088:443800..443961 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008936 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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