TCONS_00008768 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008768
Unique NameTCONS_00008768
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2337

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008768 ID=TCONS_00008768|Name=TCONS_00008768|organism=Clytia hemisphaerica|type=transcript|length=2337bp
TACAGACCTCAATTATTTGCAGAGTGTTATAAGAGTTTGTATAATGGTCT
GTAATTTAACCAATTTTTATTCAACAGAATAGCGGGAATTGTGAATCGGA
TGTAAATAGttgttgagaaaatgattgtGTTTTATTGTCTATGAATAAAC
TATAGCTTTATGCTGTTCTAGGTCTAAAATACAAACTTTTGGTCACGAAG
ATTAGGTCTTATTGGTAGTTGTTTCACACAGCCGACCTTCGTCAAACTCT
CCacCCTTCTATCGCTAACAAACAAAATATGTTTTCTGGACTCTATGATT
GGTTCTGGGACGAACACAATTGGTTACCAGAAGGCTACACATGGGAAGAT
TTTGAATCAACACCCAACATTACAAAACCGCACGCTAAAGACTTGTATAT
CACGCCCTTCTTAGCTGTTGGTATATTTCTATTCCGGTATATCTTTGAGA
AATATGCTGCGTTACGTCTTTGTAATGCTTTAGgtattaaaaatgtttca
aatgaCAATAAATTATGTTCAAATGTGATATGTGAGACAGCTTTCAAATC
TTCAACCAATCCAGACCAAGCAATGCTACGTCAGCTCAGTAAAGATACTG
GTTGGACTTTTCAAGCTGTGTCACGTTGGTTTCGCCGACGTAGACGTGCT
AAAAACAAAACGCCGCTTCTACGTAAAGCTACAGAATCATGTTGGCGTTG
TTTCGTATATTTAGTCTTATTCGTTTATGGTTCTTACGTACTTTTCCGTA
CGGACTGGCTTTGGGACACTAAACAATTTTTGATTGGTTATATACGTACG
CATAATCTTACGGTCGAATTACGTTGGTATTATTACATAGAGCTTGCCTT
ATATCTTCAAATGATGGTTACACAGTTGACAGATACGAAACGGAAAGACT
TTTGGCAGCAATACATACATCACGTGGTCACTATCTTGTTGATAAGTGGT
TCCTTCACGTCCGGACATTTTCGTTTCGGTGCTGTCATTATGTTCATACA
CGATGCGTCTGATTTTTGGCTGGAAGGAGCAAAAGTATGCAACTATGCCA
AAATCGAACGTTTAagtgaaatctttttcataCTTTTCGCAGTCACTTTT
TATCTAACACGTTGGGTTTATTTTCCGTTCTGGGTTTTACAAACATTTAT
GAAAGAAAACGGACGGATTTGTGGCAGTCAAACATCTTATTATTCATTCC
CATACTTGATGCTATACCTCTGTTTTGTGTTGTGTGTTTTACATTTCTAT
TGGGGAGTATTGATTGGTCGAATGATTTATAAATTTACAGCAGCCGGTAA
GATAGAGAAGGACGTTCGGAGTGACGATGATGAAGATGGTAGTGATGTTG
GCGATACAGACTAAATCAAACTAAAAATTCAAGACACCAATCAAATAATA
ACACTTAGTACTACAGTAGACACCCGGTTATTCGAATCTGCACTTATTCG
AAAAATTCGGTTATTCGAAGTGAGATGGCAGGCAAAAACACTCTCGGTTA
TTCGGACTTCAGTTATTTCaactttcagttattcgaagcgATTTCTATTC
CCCTTGGAGCACATTATAGGCAAAATCATCCTcagttattcgaatttttc
ttattGGGAGATCGTCGAGGGAGAACATTGATTTTCTGCGATTAAAAtac
cttttccttaagaaattatGTTTCAATATTCATGGCCATATATCAATATT
CAAgcaatttctttgtgtttattaCCCTCAACTGAACCGCAATGCTTCAG
AAAAGTCCCTCCAATTAAGGTCAAGTTGAGAATCTTGCgggaaatgaatt
tttcagttattcgaactcccggttattcatatataatatataataatcGT
TACTCTTCCAATAGAATTCTTCTCCCAATGTATCAAAACGATTGCGATAC
ATACGggcctctttttcaaaaaaaaagattattttaaCCGACAAATACAT
TCAATCAATGTGTTTGattctaatacaccttttcgaccgtagtctcgcgg
tcaggcgcgtggcattttattatttaatttaccactcTAAACTCTATCCA
ATccctttttacactttttttctattgtctttaggcgcGAAAAAgggttt
agggtggtaaaacggacaagaAAACGCTCACGCGGCAATTGACGGCTACG
ATCGAAAAGTTGTTTAAAATGCTATTagatttgaaatttcatatATAAAA
GTGCAAAGGCGCActgaacctttcatgtcaaaggtaggtcgtgttcacac
tacagaccttccttaataaaaatgtagttaggagaatcttttgttgacta
caatacagaacgtgcatttaacaaagagtcgaacgcg
Run BLAST on NCBI

protein sequence of TCONS_00008768-protein

>TCONS_00008768-protein ID=TCONS_00008768-protein|Name=TCONS_00008768-protein|organism=Clytia hemisphaerica|type=polypeptide|length=361bp
MFSGLYDWFWDEHNWLPEGYTWEDFESTPNITKPHAKDLYITPFLAVGIF
LFRYIFEKYAALRLCNALGIKNVSNDNKLCSNVICETAFKSSTNPDQAML
RQLSKDTGWTFQAVSRWFRRRRRAKNKTPLLRKATESCWRCFVYLVLFVY
GSYVLFRTDWLWDTKQFLIGYIRTHNLTVELRWYYYIELALYLQMMVTQL
TDTKRKDFWQQYIHHVVTILLISGSFTSGHFRFGAVIMFIHDASDFWLEG
AKVCNYAKIERLSEIFFILFAVTFYLTRWVYFPFWVLQTFMKENGRICGS
QTSYYSFPYLMLYLCFVLCVLHFYWGVLIGRMIYKFTAAGKIEKDVRSDD
DEDGSDVGDTD
Run BLAST on NCBI

transcript from alignment at sc0000087:181070..185558-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008768 ID=TCONS_00008768|Name=TCONS_00008768|organism=Clytia hemisphaerica|type=transcript|length=4489bp|location=Sequence derived from alignment at sc0000087:181070..185558- (Clytia hemisphaerica)
TACAGACCTCAATTATTTGCAGAGTGTTATAAGAGTTTGTATAATGGTCT
GTAATTTAACCAATTTTTATTCAACAGAATAGCGGGAATTGTGAATCGGA
TGTAAATAGTTGTTGAGAAAATGATTGTGTTTTATTGTCTATGAATAAAC
TATAGCTTTATGCTGTTCTAGGTCTAAAATACAAACTTTTGGTCACGAAG
ATTAGGTCTTATTGGTAGTTGTTTCACACAGCCGACCTTCGTCAAACTCT
CCGTAAGTAAACTAAAATTTGATCATCCGTTTCACGGGAAATTATAGCTT
AGTTACTGTACTCTCTTTTACTCTTTACCGCAAATGATTGATCCTTTGAA
ATTTGGTTTCGGTTCAAGTCAGTTTGTTATTGATAAAGTCAGTAATAATA
AGTGTAGAATTTCGTTTGGTTTTGGGAGGTCATACAAATCCTCACACATC
TAAGAAGCATGTTTTAACCAAGTTCCTTGTTTTAACATAGTGCACCGTCT
TAGCTTTCACAATAAAGATAATTGTAAAAATAATCATCAGATACACGTGC
CAAAGATTCAAGAGACAGGGATGTGTCTTATCTTTATTTATGTAAATGAG
ATATATCCCTGTCTCGATTCTTTGACACATGTGTCTGATCTTTTATTTTA
ACCAACGGCATCCCTGTCTCTATTATTCTTTACCCAAAGTTATCAACTTC
ACGAAATAGTTTTTACACCCCTGTCTCATTGAACTTATATCGATAAGAAT
TTTAGGGTATGCAGTGGGGATGATAAAGCGAAATTTTGTGAATGTTAACC
GAGATTGGAATTGGACAAAAATCTTGTAGAAAATGTTTTTCTCAGTGTCT
GAATCGTCCAAGAATCGTTCAAACATAAATAATTCATTCGAGATTTTCAC
TGCATTCGATAACTCTTTTCATTTCAATTAAAACTTCTTTTATGCGTGTG
AATGAAGGTCATACACGCTTTTTTTTTTATAAGAATGGTGTAAATCCATT
TCATCATGGATATTCTTAACTTTTTTAGGAAAATCATCCTAAAATNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTAAAATTCCATGATGGTGATATTCTTAGCATATTC
TTAATTTTTTAGCCATTTTCATCATGGACATTCTTATAAAGTGTATTCTT
ATAAAAAAAAAAGCGTGTATGTGACTTATTTTGCACATGCAAGCAAAAAA
AAAATGATTTAAGAATTACTTTATCTGTCATTTTGACATTTTGAATTAAA
ACTTATCTTTCCAGATCTTTCAAAATTTAATCATGCGATGTCTTCTAGGT
TGTGTAAAAAAGAAATGGAACTATTTTAAAATTATCTTTAGAGTAACTCT
TTTTATATTGTTCTTTTATCTTGCATTATTAGATTTTGAGGAATCTTCTT
AAACATCTTAAAAGTGAATCGTCAAAGTAACATGATTCGTTATTTTCTTT
AATTTTTCAGACCCTTCTATCGCTAACAAACAAAATATGTTTTCTGGACT
CTATGATTGGTTCTGGGACGAACACAATTGGTTACCAGAAGGCTACACAT
GGGAAGATTTTGAATCAACACCCAACATTACAAAACCGCACGCTAAAGAC
TTGTATATCACGCCCTTCTTAGCTGTTGGTATATTTCTATTCCGGTATAT
CTTTGAGAAATATGCTGCGTTACGTCTTTGTAATGCTTTAGGTATTAAAA
ATGTTTCAAATGACAATAAATTATGTTCAAATGTGATATGTGAGACAGCT
TTCAAATCTTCAACCAATCCAGACCAAGCAATGCTACGTCAGCTCAGTAA
AGATACTGGTTGGACTTTTCAAGCTGTGTCACGTTGGTTTCGCCGACGTA
GACGTGCTAAAAACAAAACGCCGCTTCTACGTAAAGCTACAGAATCATGT
TGGCGTTGTTTCGTATATTTAGTCTTATTCGTTTATGGTTCTTACGTACT
TTTCCGTACGGACTGGCTTTGGGACACTAAACAATTTTTGATTGGTTATA
TACGTACGCATAATCTTACGGTCGAATTACGTTGGTATTATTACATAGAG
CTTGCCTTATATCTTCAAATGATGGTTACACAGTTGACAGATACGAAACG
GAAAGACTTTTGGCAGCAATACATACATCACGTGGTCACTATCTTGTTGA
TAAGTGGTTCCTTCACGTCCGGACATTTTCGNGTTATTTTCTTTAATTTT
TCAGACCCTTCTATCGCTAACAAACAAAATATGTTTTCTGGACTCTATGA
TTGGTTCTGGGACGAACACAATTGGTTACCAGAAGGCTACACATGGGAAG
ATTTTGAATCAACACCCAACATTACAAAACCGCACGCTAAAGACTTGTAT
ATCACGCCCTTCTTAGCTGTTGGTATATTTCTATTCCGGTATATCTTTGA
GAAATATGCTGCGTTACGTCTTTGTAATGCTTTAGGTATTAAAAATGTTT
CAAATGACAATAAATTATGTTCAAATGTGATATGTGAGACAGCTTTCAAA
TCTTCAACCAATCCAGACCAAGCAATGCTACGTCAGCTCAGTAAAGATAC
TGGTTGGACTTTTCAAGCTGTGTCACGTTGGTTTCGCCGACGTAGACGTG
CTAAAAACAAAACGCCGCTTCTACGTAAAGCTACAGAATCATGTTGGCGT
TGTTTCGTATATTTAGTCTTATTCGTTTATGGTTCTTACGTACTTTTCCG
TACGGACTGGCTTTGGGACACTAAACAATTTTTGATTGGTTATATACGTA
CGCATAATCTTACGGTCGAATTACGTTGGTATTATTACATAGAGCTTGCC
TTATATCTTCAAATGATGGTTACACAGTTGACAGATACGAAACGGAAAGA
CTTTTGGCAGCAATACATACATCACGTGGTCACTATCTTGTTGATAAGTG
GTTCCTTCACGTCCGGACATTTTCGTTTCGGTGCTGTCATTATGTTCATA
CACGATGCGTCTGATTTTTGGCTGGAAGGAGCAAAAGTATGCAACTATGC
CAAAATCGAACGTTTAAGTGAAATCTTTTTCATACTTTTCGCAGTCACTT
TTTATCTAACACGTTGGGTTTATTTTCCGTTCTGGGTTTTACAAACATTT
ATGAAAGAAAACGGACGGATTTGTGGCAGTCAAACATCTTATTATTCATT
CCCATACTTGATGCTATACCTCTGTTTTGTGTTGTGTGTTTTACATTTCT
ATTGGGGAGTATTGATTGGTCGAATGATTTATAAATTTACAGCAGCCGGT
AAGATAGAGAAGGACGTTCGGAGTGACGATGATGAAGATGGTAGTGATGT
TGGCGATACAGACTAAATCAAACTAAAAATTCAAGACACCAATCAAATAA
TAACACTTAGTACTACAGTAGACACCCGGTTATTCGAATCTGCACTTATT
CGAAAAATTCGGTTATTCGAAGTGAGATGGCAGGCAAAAACACTCTCGGT
TATTCGGACTTCAGTTATTTCAACTTTCAGTTATTCGAAGCGATTTCTAT
TCCCCTTGGAGCACATTATAGGCAAAATCATCCTCAGTTATTCGAATTTT
TCTTATTGGGAGATCGTCGAGGGAGAACATTGATTTTCTGCGATTAAAAT
ACCTTTTCCTTAAGAAATTATGTTTCAATATTCATGGCCATATATCAATA
TTCAAGCAATTTCTTTGTGTTTATTACCCTCAACTGAACCGCAATGCTTC
AGAAAAGTCCCTCCAATTAAGGTCAAGTTGAGAATCTTGCGGGAAATGAA
TTTTTCAGTTATTCGAACTCCCGGTTATTCATATATAATATATAATAATC
GTTACTCTTCCAATAGAATTCTTCTCCCAATGTATCAAAACGATTGCGAT
ACATACGGGCCTCTTTTTCAAAAAAAAAGATTATTTTAACCGACAAATAC
ATTCAATCAATGTGTTTGATTCTAATACACCTTTTCGACCGTAGTCTCGC
GGTCAGGCGCGTGGCATTTTATTATTTAATTTACCACTCTAAACTCTATC
CAATCCCTTTTTACACTTTTTTTCTATTGTCTTTAGGCGCGAAAAAGGGT
TTAGGGTGGTAAAACGGACAAGAAAACGCTCACGCGGCAATTGACGGCTA
CGATCGAAAAGTTGTTTAAAATGCTATTAGATTTGAAATTTCATATATAA
AAGTGCAAAGGCGCACTGAACCTTTCATGTCAAAGGTAGGTCGTGTTCAC
ACTACAGACCTTCCTTAATAAAAATGTAGTTAGGAGAATCTTTTGTTGAC
TACAATACAGAACGTGCATTTAACAAAGAGTCGAACGCG

Coding sequence (CDS) from alignment at sc0000087:181070..185558-

>TCONS_00008768 ID=TCONS_00008768|Name=TCONS_00008768|organism=Clytia hemisphaerica|type=CDS|length=2172bp|location=Sequence derived from alignment at sc0000087:181070..185558- (Clytia hemisphaerica)
GTTTTCTGGACTCTATGATTGGTTCTGGGACGAACACAATTGGTTACCAG
AAGGCTACACATGGGAAGATTTTGAATCAACACCCAACATTACAAAACCG
CACGCTAAAGACTTGTATATCACGCCCTTCTTAGCTGTTGGTATATTTCT
ATTCCGGTATATCTTTGAGAAATATGCTGCGTTACGTCTTTGTAATGCTT
TAGGTATTAAAAATGTTTCAAATGACAATAAATTATGTTCAAATGTGATA
TGTGAGACAGCTTTCAAATCTTCAACCAATCCAGACCAAGCAATGCTACG
TCAGCTCAGTAAAGATACTGGTTGGACTTTTCAAGCTGTGTCACGTTGGT
TTCGCCGACGTAGACGTGCTAAAAACAAAACGCCGCTTCTACGTAAAGCT
ACAGAATCATGTTGGCGTTGTTTCGTATATTTAGTCTTATTCGTTTATGG
TTCTTACGTACTTTTCCGTACGGACTGGCTTTGGGACACTAAACAATTTT
TGATTGGTTATATACGTACGCATAATCTTACGGTCGAATTACGTTGGTAT
TATTACATAGAGCTTGCCTTATATCTTCAAATGATGGTTACACAGTTGAC
AGATACGAAACGGAAAGACTTTTGGCAGCAATACATACATCACGTGGTCA
CTATCTTGTTGATAAGTGGTTCCTTCACGTCCGGACATTTTCGTTTCGGT
GCTGTCATTATGTTCATACACGATGCGTCTGATTTTTGGCTGGAAGGAGC
AAAAGTATGCAACTATGCCAAAATCGAACGTTTAAGTGAAATCTTTTTCA
TACTTTTCGCAGTCACTTTTTATCTAACACGTTGGGTTTATTTTCCGTTC
TGGGTTTTACAAACATTTATGAAAGAAAACGGACGGATTTGTGGCAGTCA
AACATCTTATTATTCATTCCCATACTTGATGCTATACCTCTGTTTTGTGT
TGTGTGTTTTACATTTCTATTGGGGAGTATTGATTGGTCGAATGATTTAT
AAATTTACAGCAGCCGGTAAGATAGAGAAGGACGTTCGGAGTGACGATGA
TGAAGATGGTAGTGATGTTGGCGATACAGACTAAATGTTTTCTGGACTCT
ATGATTGGTTCTGGGACGAACACAATTGGTTACCAGAAGGCTACACATGG
GAAGATTTTGAATCAACACCCAACATTACAAAACCGCACGCTAAAGACTT
GTATATCACGCCCTTCTTAGCTGTTGGTATATTTCTATTCCGGTATATCT
TTGAGAAATATGCTGCGTTACGTCTTTGTAATGCTTTAGGTATTAAAAAT
GTTTCAAATGACAATAAATTATGTTCAAATGTGATATGTGAGACAGCTTT
CAAATCTTCAACCAATCCAGACCAAGCAATGCTACGTCAGCTCAGTAAAG
ATACTGGTTGGACTTTTCAAGCTGTGTCACGTTGGTTTCGCCGACGTAGA
CGTGCTAAAAACAAAACGCCGCTTCTACGTAAAGCTACAGAATCATGTTG
GCGTTGTTTCGTATATTTAGTCTTATTCGTTTATGGTTCTTACGTACTTT
TCCGTACGGACTGGCTTTGGGACACTAAACAATTTTTGATTGGTTATATA
CGTACGCATAATCTTACGGTCGAATTACGTTGGTATTATTACATAGAGCT
TGCCTTATATCTTCAAATGATGGTTACACAGTTGACAGATACGAAACGGA
AAGACTTTTGGCAGCAATACATACATCACGTGGTCACTATCTTGTTGATA
AGTGGTTCCTTCACGTCCGGACATTTTCGTTTCGGTGCTGTCATTATGTT
CATACACGATGCGTCTGATTTTTGGCTGGAAGGAGCAAAAGTATGCAACT
ATGCCAAAATCGAACGTTTAAGTGAAATCTTTTTCATACTTTTCGCAGTC
ACTTTTTATCTAACACGTTGGGTTTATTTTCCGTTCTGGGTTTTACAAAC
ATTTATGAAAGAAAACGGACGGATTTGTGGCAGTCAAACATCTTATTATT
CATTCCCATACTTGATGCTATACCTCTGTTTTGTGTTGTGTGTTTTACAT
TTCTATTGGGGAGTATTGATTGGTCGAATGATTTATAAATTTACAGCAGC
CGGTAAGATAGAGAAGGACGTTCGGAGTGACGATGATGAAGATGGTAGTG
ATGTTGGCGATACAGACTAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004914XLOC_004914Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008768-proteinTCONS_00008768-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008768-exon-sc0000087-1575043694:185307..185558TCONS_00008768-exon-sc0000087-1575043694:185307..185558Clytia hemisphaericaexon
TCONS_00008768-exon-sc0000087-1575043694:183871..183898TCONS_00008768-exon-sc0000087-1575043694:183871..183898Clytia hemisphaericaexon
TCONS_00008768-exon-sc0000087-1575043694:181070..183126TCONS_00008768-exon-sc0000087-1575043694:181070..183126Clytia hemisphaericaexon
TCONS_00008768-exon-sc0000087-1510915933:185307..185558TCONS_00008768-exon-sc0000087-1510915933:185307..185558Clytia hemisphaericaexon
TCONS_00008768-exon-sc0000087-1510915933:183871..183898TCONS_00008768-exon-sc0000087-1510915933:183871..183898Clytia hemisphaericaexon
TCONS_00008768-exon-sc0000087-1510915933:181070..183126TCONS_00008768-exon-sc0000087-1510915933:181070..183126Clytia hemisphaericaexon
TCONS_00008768-exon-sc0000087-1491911889:185307..185558TCONS_00008768-exon-sc0000087-1491911889:185307..185558Clytia hemisphaericaexon
TCONS_00008768-exon-sc0000087-1491911889:183871..183898TCONS_00008768-exon-sc0000087-1491911889:183871..183898Clytia hemisphaericaexon
TCONS_00008768-exon-sc0000087-1491911889:181070..183126TCONS_00008768-exon-sc0000087-1491911889:181070..183126Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:181070..185558 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.32453	9.49311	2.86927	1.05961	37.1565	32.3715	184.079	181.904	88.2831	74.1832	103.91	81.2521	65.7917	71.5173	68.0217	95.722	95.0158	87.1312	71.3364	67.2307	89.4093	79.8051	32.6181	42.4732	60.8058	77.1324	43.6222	23.2566	23.2414	17.8132
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom
IPR016439Lag1/Lac1
IPR009057Homeobox-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005783endoplasmic reticulum
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003677 DNA binding
Blast
[Close]
BLAST of TCONS_00008768 vs. Swiss-Prot (Human)
Match: CERS6 (Ceramide synthase 6 OS=Homo sapiens GN=CERS6 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.721e-64
Identity = 132/344 (38.37%), Postives = 198/344 (57.56%), Query Frame = 3 
Query:  285 SGLYDWFWDEHNWLPEGYTWEDFESTPNITKPHAKDLYITPFLAVGIFLFRYIFEKYAALRLCNALGIKNVSNDNKLCS-NVICETAFKSST-NPDQAMLRQLSKDTGWTFQAVSRWFXXXXXAKNKTPLLRKATESCWRCFVYLVLFVYGSYVLFRTDWLWDTKQFLIGYIRTHNLTVELRWYYYIELALYLQMMVTQLTDTKRKDFWQQYIHHVVTILLISGSFTSGHFRFGAVIMFIHDASDFWLEGAKVCNYAKIERLSEIFFILFAVTFYLTRWVYFPFWVLQTFMKENGRICGSQTSYYSFPYLMLYLCFVLCVLHFYWGVLIGRMIYKFTAAGKIEK 1310
            +G+  WFW+E  WLP   TW D ++T   T P A+DLY+   LA  IF+ R IFE++ A     AL I+  +N  ++   N I E  F + T +PD+  L  LSK   W  +++ RWFR+RR  + K   L +  ES WR   YL +F YG   L +T WLW+T+     Y     LT +L +YY +EL+ Y  +M +Q TD KRKDF   ++HH+V+I LI+ S+ +   R G +++ +HD++D  LE AK+ NYAK +++ ++ F++FAV F  TR   FP WVL T + E+  I G   S++ F  L+L +  + C    +W  LI ++  K  + GK+ K
Sbjct:    2 AGILAWFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFVAKPCAIALNIQ--ANGPQIAPPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRN-QEKPSTLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNY-PYQPLTTDLHYYYILELSFYWSLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDSADALLEAAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPSWWVFNLLLLLVQGLNC----FWSYLIVKIACKAVSRGKVSK 337
The following BLAST results are available for this feature:
BLAST of TCONS_00008768 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CERS66.721e-6438.37Ceramide synthase 6 OS=Homo sapiens GN=CERS6 PE=1 ... [more]
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