TCONS_00008675 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008675
Unique NameTCONS_00008675
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length121

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008675 ID=TCONS_00008675|Name=TCONS_00008675|organism=Clytia hemisphaerica|type=transcript|length=121bp
TTTAGTTTGTCGAATATTAGTCGGATAGTTATCTTTGCATTAAAAGaata
ttattaatttatttttttaaactttcaacgCATTCACACTCTAGTTACAA
GTTTACATTTGTTTCATCAAC
Run BLAST on NCBI

transcript from alignment at sc0000086:702345..702465

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008675 ID=TCONS_00008675|Name=TCONS_00008675|organism=Clytia hemisphaerica|type=transcript|length=121bp|location=Sequence derived from alignment at sc0000086:702345..702465 (Clytia hemisphaerica)
GTTGATGAAACAAATGTAAACTTGTAACTAGAGTGTGAATGcgttgaaag
tttaaaaaaataaattaataatattCTTTTAATGCAAAGATAACTATCCG
ACTAATATTCGACAAACTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004875XLOC_004875Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008675-exon-sc0000086-1491911889:702345..702465TCONS_00008675-exon-sc0000086-1491911889:702345..702465Clytia hemisphaericaexon
TCONS_00008675-exon-sc0000086-1510915933:702345..702465TCONS_00008675-exon-sc0000086-1510915933:702345..702465Clytia hemisphaericaexon
TCONS_00008675-exon-sc0000086-1575043694:702345..702465TCONS_00008675-exon-sc0000086-1575043694:702345..702465Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:702345..702465 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008675 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top