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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008655 ID=TCONS_00008655|Name=TCONS_00008655|organism=Clytia hemisphaerica|type=transcript|length=1798bp
gttaataaatcaaaatttcaaaatcacatcTAGCAATTATAGGTCATAAA
ATTTACATAATTGAACGCATACatataattattcaaaaaagcTCTAGAGG
ATAAGAAGATACCGTTTTATTTAAATCAGGTTTCAAATCCCTAATGATTG
AGGATTCTTTTACGCTACGACGGAGCCGAATTATGCGAACTCGTAGGCAT
CTTCATCCTCgaaaaactatcaaaacttAACGACAAAAACAATAATGGTT
TGTATCGCCATGATGGCTTGATGCTAATCCGTTCAACCAGCAAACGACTG
ATCAAAAAGATGAAACAATCAATTATCAACACCTTCAAAGACATAGGTTT
CGATATCAACATTTTAACTAACCTAAAAGTGGTAAACTTTCTAGACCTAA
CACTTGACCTTATCAATGGCACCCACCGAccttacaaaaaaacaaacgac
AGACTCCTTTACGTAAACACATCATCCAACCACCCATCTAATATTCAGGA
GCAGCTACGACTTCAATAAATAATAGACTGTCAACAAACTCTTCAAACAA
AACTATTTTTAACGAAGCTAAGATTGAATACGAAAACGCACTCAAGAATA
GCggttacaaaaacgtcaaactcAAATTTAGCAAACCGAAAACACACATC
AAAAATCGCATACATAATATAATATGGTTCAACCCACCGTTCAACAAAAA
CGTATCAACAAACGTTGCCAAATCATTTCTCCGCCTTATCAATAAATATT
TTACCCACGAAAACAGTCTTCGAAAAGTTTTAAACCGAAACAACGTAAAG
GTGAGCTATAGCTGCACTCAAAACATTGGCTCAATAATCAAATCTCACac
caaaaatcttttgtcaCGGATTAACAACACAGACGAACCGTGTAATTGTA
CAATAAAAGATGATTGCCCCCTCGAAGGAAATTGCCAGATCTCATCAGCC
ATTTACAAATGTGAAGTTACCGGGGAAAACGTACCCAAAAAGGTTTACTT
AGGATTAACAGAAAGGACATTCAAAGAACGTTACAATGGACACAAATCAT
CATTTAATAATGAGCTCTACAAAAATAGCACTACACTCTCGACACACATC
TGGGATATAAAATCAAAAGGCGTGATTCCCACATTAAAATGGTCAATTGT
TTCCCAAGCGAGGTCATACAATAACATTTCCAAAACATGCCAATTATGTC
TGAATGAAAAACTCGAAATAGTTTCACTGTTTGCGAagcattttcattat
tttgtgaTGTTGTTTAGAAGAAAATGCGAAAGTATCTTCAATGCATTTCT
CGAGAAAAGCGAAGTAAGACTTGAAGTAAGAAATTGTAGACAAAGCAAAA
AATAGTGAAGTTTTAAAGCAATAGAAACAAGTGAGCAAAGTTGtaagttt
ataaagcaataaatAAGCGAATGAAGTAAGTTTTGAAataagcgagttga
taaagcaatagataaacaaatgaataaagttgcgaagtagcgagttgata
aaaaagCAATAGATACTGTAAACGAATGAATAAGGTAGCGTAGtggcgag
tagataaagcaattgataaacgaatgaataaagtagcgaattagtgagtt
gataaagcaatagataaacgaataaataaagtagcgaagtggcgagtaga
taaagcaatagataaacaagtgaataaagttgcaaagtggcaagttgata
aagtaatagataaacgagtgaataaagtagcaaggagtgagttgataaag
caatagataaacaagtgaataaagtagcaagGAGTGAGTTGAtaaaag Run BLAST on NCBI transcript from alignment at sc0000086:381417..383214 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008655 ID=TCONS_00008655|Name=TCONS_00008655|organism=Clytia hemisphaerica|type=transcript|length=1798bp|location=Sequence derived from alignment at sc0000086:381417..383214 (Clytia hemisphaerica)
cttttaTCAACTCACTCcttgctactttattcacttgtttatctattgct
ttatcaactcactccttgctactttattcactcgtttatctattacttta
tcaacttgccactttgcaactttattcacttgtttatctattgctttatc
tactcgccacttcgctactttatttattcgtttatctattgctttatcaa
ctcactaattcgctactttattcattcgtttatcaattgctttatctact
cgccaCTACGCTACCTTATTCATTCGTTTACAGTATCTATTGctttttta
tcaactcgctacttcgcaactttattcatttgtttatctattgctttatc
aactcgcttatTTCAAAACTTACTTCATTCGCTTatttattgctttataa
acttaCAACTTTGCTCACTTGTTTCTATTGCTTTAAAACTTCACTATTTT
TTGCTTTGTCTACAATTTCTTACTTCAAGTCTTACTTCGCTTTTCTCGAG
AAATGCATTGAAGATACTTTCGCATTTTCTTCTAAACAACAtcacaaaat
aatgaaaatgctTCGCAAACAGTGAAACTATTTCGAGTTTTTCATTCAGA
CATAATTGGCATGTTTTGGAAATGTTATTGTATGACCTCGCTTGGGAAAC
AATTGACCATTTTAATGTGGGAATCACGCCTTTTGATTTTATATCCCAGA
TGTGTGTCGAGAGTGTAGTGCTATTTTTGTAGAGCTCATTATTAAATGAT
GATTTGTGTCCATTGTAACGTTCTTTGAATGTCCTTTCTGTTAATCCTAA
GTAAACCTTTTTGGGTACGTTTTCCCCGGTAACTTCACATTTGTAAATGG
CTGATGAGATCTGGCAATTTCCTTCGAGGGGGCAATCATCTTTTATTGTA
CAATTACACGGTTCGTCTGTGTTGTTAATCCGtgacaaaagatttttggt
GTGAGATTTGATTATTGAGCCAATGTTTTGAGTGCAGCTATAGCTCACCT
TTACGTTGTTTCGGTTTAAAACTTTTCGAAGACTGTTTTCGTGGGTAAAA
TATTTATTGATAAGGCGGAGAAATGATTTGGCAACGTTTGTTGATACGTT
TTTGTTGAACGGTGGGTTGAACCATATTATATTATGTATGCGATTTTTGA
TGTGTGTTTTCGGTTTGCTAAATTTgagtttgacgtttttgtaaccGCTA
TTCTTGAGTGCGTTTTCGTATTCAATCTTAGCTTCGTTAAAAATAGTTTT
GTTTGAAGAGTTTGTTGACAGTCTATTATTTATTGAAGTCGTAGCTGCTC
CTGAATATTAGATGGGTGGTTGGATGATGTGTTTACGTAAAGGAGTCTgt
cgtttgtttttttgtaaggTCGGTGGGTGCCATTGATAAGGTCAAGTGTT
AGGTCTAGAAAGTTTACCACTTTTAGGTTAGTTAAAATGTTGATATCGAA
ACCTATGTCTTTGAAGGTGTTGATAATTGATTGTTTCATCTTTTTGATCA
GTCGTTTGCTGGTTGAACGGATTAGCATCAAGCCATCATGGCGATACAAA
CCATTATTGTTTTTGTCGTTaagttttgatagtttttcGAGGATGAAGAT
GCCTACGAGTTCGCATAATTCGGCTCCGTCGTAGCGTAAAAGAATCCTCA
ATCATTAGGGATTTGAAACCTGATTTAAATAAAACGGTATCTTCTTATCC
TCTAGAgcttttttgaataattatatGTATGCGTTCAATTATGTAAATTT
TATGACCTATAATTGCTAgatgtgattttgaaattttgatttattaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008655-exon-sc0000086-1491911889:381417..383214 | TCONS_00008655-exon-sc0000086-1491911889:381417..383214 | Clytia hemisphaerica | exon |
| TCONS_00008655-exon-sc0000086-1510915933:381417..383214 | TCONS_00008655-exon-sc0000086-1510915933:381417..383214 | Clytia hemisphaerica | exon |
| TCONS_00008655-exon-sc0000086-1575043694:381417..383214 | TCONS_00008655-exon-sc0000086-1575043694:381417..383214 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086 | supercontig | sc0000086:381417..383214 . |
Blast
The following BLAST results are available for this feature:
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