TCONS_00008612 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008612
Unique NameTCONS_00008612
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2486

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008612 ID=TCONS_00008612|Name=TCONS_00008612|organism=Clytia hemisphaerica|type=transcript|length=2486bp
aaatttagaactaaattataaaatttaatcaaatttaattGGGACTCGGG
GATTTTTTAAGATGTCAAGTCCAGTTTTTTGGCTATTGATTGGTGCTTTC
TTATTCTGCTTGATTAATGGCGAGAGTGACGATTACATCAAACAAGCGCA
AGAGGAAGAGGACATTGACAAAAACGAAGGTGAGCAAATCGTGTATCAAA
ACCCAACTGAAGAAACAACTGAAACTTTTcacaaatattttttaccaCCC
GTAACAGGAGAATACAAATTCTATGCCAAATGTGGAAGTGACTGTGACGT
CATCCTTGGTGATGAAAGTAAACTTTCAGAGGAAAAAATCATTTCTGTTG
ATGGTTCCGCTGCAGCTAAGCGAGAATTTCCAGCTGAAACTGCATCTCAC
ATAATCTACCTCAAGCAAGGTCAGAAATACTTGTTGAAGACGACGACAAA
TTCACCAGCAGGACCAACACCTACGATTGGTGTGCAACTTCCAGATGACA
CCAAAATGATGCCTATCAAACAGACCTTATTCTTTTCGGAACAAGGAGCG
GCCGATGGGAAAGCAAAGTCAAAACCGGCGAAAAATGGAACCAATATGGT
TAATAAAATACCGGACTCTATAACTGGAAAGAAACATCTTTTGGGCTTAG
GATCATCAAAGCCAAAAACATCAATCAAACATAAATTGGAGAGCAACCCC
AGCAAGACGCTCTTCAAAAAGTTGGAGCGAGCAGGTCAATTCATTAAAAG
TATGGAAGACAAAAAGCTAAAGAATGATAAACTCGATTCTGGAATTACCG
ATATTATCAAAACATTACAAGAAAACTTAAATGGTGTAGAATCAAAATCA
AGATCAAGTTCATTGTTGGAGGTTGCTGGTATCGATCGTTCACATATCGA
CGAAGGTGTCTCCTCTAAAGAGAGGATTATTATCCAACTGATTGATGCTT
TGAAACGGAACTTAATCATGGAGGATAAACATCGGAAGATGAAGGAACAC
ATGTATCAACGAAAGTTGGATCGACTGTTTCATGAAGTCAATAAATTAAA
ATCTGTCCTTGGTAACACAAATATAGCTGCCAAAGCTGATTTGAATAAAG
TTGACACGAAAAAGAATAAGTATACTCCACAGAGAAGTAAACCATCCATG
ATTGGTCAGAAACGTCACCAAAAACACATCACAAGACGTCAGCATCGACA
CCATCGTTTAAGAAAGCCAGAACTCAATTTCGTGGATGAAATCGAAGACC
CTAGTCTCATAGATGACGGTCATGTTGAGGCTAGAAATAACGATGACGGC
GAAGATAGTGAGTATCCAATGTCGGTCAGGAAGATAACTCCATCAGCAGC
AGCTGCTTATGAGAAAGCAATCAATCTCATACCAGAATCTGAAGATGATG
AACTAATGGAGCAAGGACTTGCCAAAGCCTCAACTCCAGAATCTGATATG
TCAGCTATACGCCACAAACAAGCACACTTTGAAATGTTAAATCTAAAGAA
GAAACCTACTCAATCACTAAACAGCATTAAACCAATACATGGAAAAGAAG
TCAGTGCTGGAAAACAACAGAATCCAGATTCTTCTGAAAAACAAATGATG
AATTCAGGCGATCAAACAAATCCTCAAGAATCCTTATTTGTTGGCAAATC
TGGAAAACCTTCAACATCTAATCAAAGTCTATCACCGGAATATGACAATA
GCAAACAACAAGGCATAGTTGAACAGTTTAATAGCGCTGAGCCCAATCAA
AGAATGAACAATCAAAACTCTGGTAGATTAGAACCCCAGACTgaagatca
aataaaaaaattagctACAACAAGTTCAGAAAACAAAATTGATAATTCTC
AATCATCCAATAACCAAAATATCGAGCCAGAAAAAGGCAAAGCTATTAAT
AGTGCACAAAATAATGTTCAACCTGAACTTCAAAATCCAGTTGAAGTTAG
TATTGGTGGAAGTCAGAAAGAGAATCTTCAAAATGATAACCAAATAGGAc
aaattgaaaatgaagtcAAGATTAACCCAAACGATATGAAAAAATCGAAT
GATCATTTTGAAACGGATAAACCATTTTATAGACTTGCTAAAGAAGAAAG
ACCCTTATCACCGATGGCTAGCAATGTAGGAGACGCGTTGCCAACGGTGT
CAGAAAGCCAAAGGGCTGCTCACACCGCTGGAAGCTTTATCACGAATGGT
AACAAAATAGTTCCAAATACTAAGAGTAAGCAATCAGTTGTAAACTTCAA
ATCAGAGGATATAAAAGCCCTTGAAGACAACTTATTTGCCGCCTTTGAAA
AAAGGTTGAAGAACAAAGGACTCGGCACTACTCTTGAATCTTTGCAGAAA
AACAGAAACAGTGACACTGCAAATATAAGAGACTTTGAAAAGACCGAAAA
AACTGTAAACCAATTGAATACTGAGAAATCTCCAGCCTTTGATGTCAATG
TTGGAAAAGAATTGGAAACTCAAAAAGACGAACAAC
Run BLAST on NCBI

protein sequence of TCONS_00008612-protein

>TCONS_00008612-protein ID=TCONS_00008612-protein|Name=TCONS_00008612-protein|organism=Clytia hemisphaerica|type=polypeptide|length=808bp
MSSPVFWLLIGAFLFCLINGESDDYIKQAQEEEDIDKNEGEQIVYQNPTE
ETTETFHKYFLPPVTGEYKFYAKCGSDCDVILGDESKLSEEKIISVDGSA
AAKREFPAETASHIIYLKQGQKYLLKTTTNSPAGPTPTIGVQLPDDTKMM
PIKQTLFFSEQGAADGKAKSKPAKNGTNMVNKIPDSITGKKHLLGLGSSK
PKTSIKHKLESNPSKTLFKKLERAGQFIKSMEDKKLKNDKLDSGITDIIK
TLQENLNGVESKSRSSSLLEVAGIDRSHIDEGVSSKERIIIQLIDALKRN
LIMEDKHRKMKEHMYQRKLDRLFHEVNKLKSVLGNTNIAAKADLNKVDTK
KNKYTPQRSKPSMIGQKRHQKHITRRQHRHHRLRKPELNFVDEIEDPSLI
DDGHVEARNNDDGEDSEYPMSVRKITPSAAAAYEKAINLIPESEDDELME
QGLAKASTPESDMSAIRHKQAHFEMLNLKKKPTQSLNSIKPIHGKEVSAG
KQQNPDSSEKQMMNSGDQTNPQESLFVGKSGKPSTSNQSLSPEYDNSKQQ
GIVEQFNSAEPNQRMNNQNSGRLEPQTEDQIKKLATTSSENKIDNSQSSN
NQNIEPEKGKAINSAQNNVQPELQNPVEVSIGGSQKENLQNDNQIGQIEN
EVKINPNDMKKSNDHFETDKPFYRLAKEERPLSPMASNVGDALPTVSESQ
RAAHTAGSFITNGNKIVPNTKSKQSVVNFKSEDIKALEDNLFAAFEKRLK
NKGLGTTLESLQKNRNSDTANIRDFEKTEKTVNQLNTEKSPAFDVNVGKE
LETQKDEQ
Run BLAST on NCBI

transcript from alignment at sc0000086:429507..433013-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008612 ID=TCONS_00008612|Name=TCONS_00008612|organism=Clytia hemisphaerica|type=transcript|length=3507bp|location=Sequence derived from alignment at sc0000086:429507..433013- (Clytia hemisphaerica)
AAATTTAGAACTAAATTATAAAATTTAATCAAATTTAATTGGGACTCGGG GATTTTTTAAGATGTCAAGTCCAGTTTTTTGGCTATTGATTGGTGCTTTC TTATTCTGCTTGATTAATGGTAAGTGGTGATGCTCCATCATACACTAAGA GTAGAGAAGAAAATCGTACCTTTAAGCATGGAAATTTCAAAAAATTAAGA ACAGCCTGAGGCTGAGCCAATATTTACTGATTCTTATGACAAAGGTGTGT ATCAGAACATCACATTAAAATCTTCAAGTGCGCAATAATTTTCCAAAATA CTTATTTCTCGCATTGTTGCCTCTGGTAGGGTTAGGGTTGGGGTTAGAGT ACATTTGAATTCATGGCAATGAATCAATGAATTTATAGCAAAAAACTATT GTTGTGGCGACTGTCTGATAAATATTATACTTATCATACTTTCAGGCGAG AGTGACGATTACATCAAACAAGCGCAAGAGGAAGAGGACATTGACAAAAA CGAAGGTGAGCAAATCGTGTATCAAAACCCAACTGAAGAAACAACTGAAA CTTTTCACAAATATTTTTTACCACCCGTAACAGGAGAATACAAATTCTAT GCCAAATGTGGAAGTGACTGTGACGTCATCCTTGGTGATGAAAGTAAACT TTCAGAGGAAAAAATCATTTCTGTTGATGGTTCCGCTGCAGCTAAGCGAG AGTAAGTAGTTAACCTGTCTGGTACGCAAAGGTCTTACAACGTTTTGACT GTATTCTCTACCACCTGTCTTCCATCACACCGCTGCTTGTTCTATAATCT TTCTAGGATATGCTTTATAGGATCTTACCATCGTATATCTAAGTTATTTG TTAGCTTCGCTTCTTTTTAGATTTCCAGCTGAAACTGCATCTCACATAAT CTACCTCAAGCAAGGTCAGAAATACTTGTTGAAGACGACGACAAATTCAC CAGCAGGACCAACACCTACGATTGGTGTGCAACTTCCAGATGACACCAAA ATGATGCCTATCAAACAGACCTTATTCTTTTCGGAACAAGGAGCGGCCGA TGGGAAAGCAAAGTCAAAACCGGCGAAAAATGGAACCAATATGGTTAATA AAATACCGGACTCTATAACTGGAAAGAAACATCTTTTGGGCTTAGGTAAG ATATTAACTTGCCTTTAATTTTAAATGGCTCTAGTTTTAAAACCTCTTTA AATAAATTTAATGCTCCGTGTAGTTCATCCAAAAACACACACCGTATGCT ACATGTCTAGTAAAAATCTTTAGATCCCATTCATACTACACAAATATCGA CCACCACGCCCCGATGTTGAGATTAAATGATTTAGGAGAAATATTTGTTT TCTCAATTTGTTCTCCAAGGAAATATTATGACCCGAGATTTCCGAAATAT AGTCTTTTCTCGTAAAAATTATCTGGATTTTATCTTATCAAAGATTTCAT CTCGATTGTGAATTTCTTTATTTTTGAAATGTGTTTTTGAAAACTTCTTT GATATTAAGCTCCATTAAATGGAAAAACTTTGACCTGCGATAAATGCAAA AAAACTAATTTCAGAAACACGTAAAATTTAGTAATTTTTCCTAATACCTG CTGGATGACCTGTATGATTATATCAGAAAAAAAATAGCAATCTAGAATTT TCTATTTGATTTGGTTTACAGGATCATCAAAGCCAAAAACATCAATCAAA CATAAATTGGAGAGCAACCCCAGCAAGACGCTCTTCAAAAAGTTGGAGCG AGCAGGTCAATTCATTAAAAGTATGGAAGACAAAAAGCTAAAGAATGATA AACTCGATTCTGGAATTACCGATATTATCAAAACATTACAAGAAAACTTA AATGGTGTAGAATCAAAATCAAGATCAAGTTCATTGTTGGAGGTTGCTGG TATCGATCGTTCACATATCGACGAAGGTGTCTCCTCTAAAGAGAGGATTA TTATCCAACTGATTGATGCTTTGAAACGGAACTTAATCATGGAGGATAAA CATCGGAAGATGAAGGAACACATGTATCAACGAAAGTTGGATCGACTGTT TCATGAAGTCAATAAATTAAAATCTGTCCTTGGTAACACAAATATAGCTG CCAAAGCTGATTTGAATAAAGTTGACACGAAAAAGAATAAGTATACTCCA CAGAGAAGTAAACCATCCATGATTGGTCAGAAACGTCACCAAAAACACAT CACAAGACGTCAGCATCGACACCATCGTTTAAGAAAGCCAGAACTCAATT TCGTGGATGAAATCGAAGACCCTAGTCTCATAGATGACGGTCATGTTGAG GCTAGAAATAACGATGACGGCGAAGATAGTGAGTATCCAATGTCGGTCAG GAAGATAACTCCATCAGCAGCAGCTGCTTATGAGAAAGCAATCAATCTCA TACCAGAATCTGAAGATGATGAACTAATGGAGCAAGGACTTGCCAAAGCC TCAACTCCAGAATCTGATATGTCAGCTATACGCCACAAACAAGCACACTT TGAAATGTTAAATCTAAAGAAGAAACCTACTCAATCACTAAACAGCATTA AACCAATACATGGAAAAGAAGTCAGTGCTGGAAAACAACAGAATCCAGAT TCTTCTGAAAAACAAATGATGAATTCAGGCGATCAAACAAATCCTCAAGA ATCCTTATTTGTTGGCAAATCTGGAAAACCTTCAACATCTAATCAAAGTC TATCACCGGAATATGACAATAGCAAACAACAAGGCATAGTTGAACAGTTT AATAGCGCTGAGCCCAATCAAAGAATGAACAATCAAAACTCTGGTAGATT AGAACCCCAGACTGAAGATCAAATAAAAAAATTAGCTACAACAAGTTCAG AAAACAAAATTGATAATTCTCAATCATCCAATAACCAAAATATCGAGCCA GAAAAAGGCAAAGCTATTAATAGTGCACAAAATAATGTTCAACCTGAACT TCAAAATCCAGTTGAAGTTAGTATTGGTGGAAGTCAGAAAGAGAATCTTC AAAATGATAACCAAATAGGACAAATTGAAAATGAAGTCAAGATTAACCCA AACGATATGAAAAAATCGAATGATCATTTTGAAACGGATAAACCATTTTA TAGACTTGCTAAAGAAGAAAGACCCTTATCACCGATGGCTAGCAATGTAG GAGACGCGTTGCCAACGGTGTCAGAAAGCCAAAGGGCTGCTCACACCGCT GGAAGCTTTATCACGAATGGTAACAAAATAGTTCCAAATACTAAGAGTAA GCAATCAGTTGTAAACTTCAAATCAGAGGATATAAAAGCCCTTGAAGACA ACTTATTTGCCGCCTTTGAAAAAAGGTTGAAGAACAAAGGACTCGGCACT ACTCTTGAATCTTTGCAGAAAAACAGAAACAGTGACACTGCAAATATAAG AGACTTTGAAAAGACCGAAAAAACTGTAAACCAATTGAATACTGAGAAAT CTCCAGCCTTTGATGTCAATGTTGGAAAAGAATTGGAAACTCAAAAAGAC GAACAAC

Coding sequence (CDS) from alignment at sc0000086:429507..433013-

>TCONS_00008612 ID=TCONS_00008612|Name=TCONS_00008612|organism=Clytia hemisphaerica|type=CDS|length=9696bp|location=Sequence derived from alignment at sc0000086:429507..433013- (Clytia hemisphaerica)
GATCATCAAAGCCAAAAACATCAATCAAACATAAATTGGAGAGCAACCCC
AGCAAGACGCTCTTCAAAAAGTTGGAGCGAGCAGGTCAATTCATTAAAAG
TATGGAAGACAAAAAGCTAAAGAATGATAAACTCGATTCTGGAATTACCG
ATATTATCAAAACATTACAAGAAAACTTAAATGGTGTAGAATCAAAATCA
AGATCAAGTTCATTGTTGGAGGTTGCTGGTATCGATCGTTCACATATCGA
CGAAGGTGTCTCCTCTAAAGAGAGGATTATTATCCAACTGATTGATGCTT
TGAAACGGAACTTAATCATGGAGGATAAACATCGGAAGATGAAGGAACAC
ATGTATCAACGAAAGTTGGATCGACTGTTTCATGAAGTCAATAAATTAAA
ATCTGTCCTTGGTAACACAAATATAGCTGCCAAAGCTGATTTGAATAAAG
TTGACACGAAAAAGAATAAGTATACTCCACAGAGAAGTAAACCATCCATG
ATTGGTCAGAAACGTCACCAAAAACACATCACAAGACGTCAGCATCGACA
CCATCGTTTAAGAAAGCCAGAACTCAATTTCGTGGATGAAATCGAAGACC
CTAGTCTCATAGATGACGGTCATGTTGAGGCTAGAAATAACGATGACGGC
GAAGATAGTGAGTATCCAATGTCGGTCAGGAAGATAACTCCATCAGCAGC
AGCTGCTTATGAGAAAGCAATCAATCTCATACCAGAATCTGAAGATGATG
AACTAATGGAGCAAGGACTTGCCAAAGCCTCAACTCCAGAATCTGATATG
TCAGCTATACGCCACAAACAAGCACACTTTGAAATGTTAAATCTAAAGAA
GAAACCTACTCAATCACTAAACAGCATTAAACCAATACATGGAAAAGAAG
TCAGTGCTGGAAAACAACAGAATCCAGATTCTTCTGAAAAACAAATGATG
AATTCAGGCGATCAAACAAATCCTCAAGAATCCTTATTTGTTGGCAAATC
TGGAAAACCTTCAACATCTAATCAAAGTCTATCACCGGAATATGACAATA
GCAAACAACAAGGCATAGTTGAACAGTTTAATAGCGCTGAGCCCAATCAA
AGAATGAACAATCAAAACTCTGGTAGATTAGAACCCCAGACTGAAGATCA
AATAAAAAAATTAGCTACAACAAGTTCAGAAAACAAAATTGATAATTCTC
AATCATCCAATAACCAAAATATCGAGCCAGAAAAAGGCAAAGCTATTAAT
AGTGCACAAAATAATGTTCAACCTGAACTTCAAAATCCAGTTGAAGTTAG
TATTGGTGGAAGTCAGAAAGAGAATCTTCAAAATGATAACCAAATAGGAC
AAATTGAAAATGAAGTCAAGATTAACCCAAACGATATGAAAAAATCGAAT
GATCATTTTGAAACGGATAAACCATTTTATAGACTTGCTAAAGAAGAAAG
ACCCTTATCACCGATGGCTAGCAATGTAGGAGACGCGTTGCCAACGGTGT
CAGAAAGCCAAAGGGCTGCTCACACCGCTGGAAGCTTTATCACGAATGGT
AACAAAATAGTTCCAAATACTAAGAGTAAGCAATCAGTTGTAAACTTCAA
ATCAGAGGATATAAAAGCCCTTGAAGACAACTTATTTGCCGCCTTTGAAA
AAAGGTTGAAGAACAAAGGACTCGGCACTACTCTTGAATCTTTGCAGAAA
AACAGAAACAGTGACACTGCAAATATAAGAGACTTTGAAAAGACCGAAAA
AACTGTAAACCAATTGAATACTGAGAAATCTCCAGCCTTTGATGTCAATG
TTGGAAAAGAATTGGAAACTCAAAAAGACGAACAAATTTCCAGCTGAAAC
TGCATCTCACATAATCTACCTCAAGCAAGGTCAGAAATACTTGTTGAAGA
CGACGACAAATTCACCAGCAGGACCAACACCTACGATTGGTGTGCAACTT
CCAGATGACACCAAAATGATGCCTATCAAACAGACCTTATTCTTTTCGGA
ACAAGGAGCGGCCGATGGGAAAGCAAAGTCAAAACCGGCGAAAAATGGAA
CCAATATGGTTAATAAAATACCGGACTCTATAACTGGAAAGAAACATCTT
TTGGGCTTAGGCGAGAGTGACGATTACATCAAACAAGCGCAAGAGGAAGA
GGACATTGACAAAAACGAAGGTGAGCAAATCGTGTATCAAAACCCAACTG
AAGAAACAACTGAAACTTTTCACAAATATTTTTTACCACCCGTAACAGGA
GAATACAAATTCTATGCCAAATGTGGAAGTGACTGTGACGTCATCCTTGG
TGATGAAAGTAAACTTTCAGAGGAAAAAATCATTTCTGTTGATGGTTCCG
CTGCAGCTAAGCGAGAATGTCAAGTCCAGTTTTTTGGCTATTGATTGGTG
CTTTCTTATTCTGCTTGATTAATGGATCATCAAAGCCAAAAACATCAATC
AAACATAAATTGGAGAGCAACCCCAGCAAGACGCTCTTCAAAAAGTTGGA
GCGAGCAGGTCAATTCATTAAAAGTATGGAAGACAAAAAGCTAAAGAATG
ATAAACTCGATTCTGGAATTACCGATATTATCAAAACATTACAAGAAAAC
TTAAATGGTGTAGAATCAAAATCAAGATCAAGTTCATTGTTGGAGGTTGC
TGGTATCGATCGTTCACATATCGACGAAGGTGTCTCCTCTAAAGAGAGGA
TTATTATCCAACTGATTGATGCTTTGAAACGGAACTTAATCATGGAGGAT
AAACATCGGAAGATGAAGGAACACATGTATCAACGAAAGTTGGATCGACT
GTTTCATGAAGTCAATAAATTAAAATCTGTCCTTGGTAACACAAATATAG
CTGCCAAAGCTGATTTGAATAAAGTTGACACGAAAAAGAATAAGTATACT
CCACAGAGAAGTAAACCATCCATGATTGGTCAGAAACGTCACCAAAAACA
CATCACAAGACGTCAGCATCGACACCATCGTTTAAGAAAGCCAGAACTCA
ATTTCGTGGATGAAATCGAAGACCCTAGTCTCATAGATGACGGTCATGTT
GAGGCTAGAAATAACGATGACGGCGAAGATAGTGAGTATCCAATGTCGGT
CAGGAAGATAACTCCATCAGCAGCAGCTGCTTATGAGAAAGCAATCAATC
TCATACCAGAATCTGAAGATGATGAACTAATGGAGCAAGGACTTGCCAAA
GCCTCAACTCCAGAATCTGATATGTCAGCTATACGCCACAAACAAGCACA
CTTTGAAATGTTAAATCTAAAGAAGAAACCTACTCAATCACTAAACAGCA
TTAAACCAATACATGGAAAAGAAGTCAGTGCTGGAAAACAACAGAATCCA
GATTCTTCTGAAAAACAAATGATGAATTCAGGCGATCAAACAAATCCTCA
AGAATCCTTATTTGTTGGCAAATCTGGAAAACCTTCAACATCTAATCAAA
GTCTATCACCGGAATATGACAATAGCAAACAACAAGGCATAGTTGAACAG
TTTAATAGCGCTGAGCCCAATCAAAGAATGAACAATCAAAACTCTGGTAG
ATTAGAACCCCAGACTGAAGATCAAATAAAAAAATTAGCTACAACAAGTT
CAGAAAACAAAATTGATAATTCTCAATCATCCAATAACCAAAATATCGAG
CCAGAAAAAGGCAAAGCTATTAATAGTGCACAAAATAATGTTCAACCTGA
ACTTCAAAATCCAGTTGAAGTTAGTATTGGTGGAAGTCAGAAAGAGAATC
TTCAAAATGATAACCAAATAGGACAAATTGAAAATGAAGTCAAGATTAAC
CCAAACGATATGAAAAAATCGAATGATCATTTTGAAACGGATAAACCATT
TTATAGACTTGCTAAAGAAGAAAGACCCTTATCACCGATGGCTAGCAATG
TAGGAGACGCGTTGCCAACGGTGTCAGAAAGCCAAAGGGCTGCTCACACC
GCTGGAAGCTTTATCACGAATGGTAACAAAATAGTTCCAAATACTAAGAG
TAAGCAATCAGTTGTAAACTTCAAATCAGAGGATATAAAAGCCCTTGAAG
ACAACTTATTTGCCGCCTTTGAAAAAAGGTTGAAGAACAAAGGACTCGGC
ACTACTCTTGAATCTTTGCAGAAAAACAGAAACAGTGACACTGCAAATAT
AAGAGACTTTGAAAAGACCGAAAAAACTGTAAACCAATTGAATACTGAGA
AATCTCCAGCCTTTGATGTCAATGTTGGAAAAGAATTGGAAACTCAAAAA
GACGAACAAATTTCCAGCTGAAACTGCATCTCACATAATCTACCTCAAGC
AAGGTCAGAAATACTTGTTGAAGACGACGACAAATTCACCAGCAGGACCA
ACACCTACGATTGGTGTGCAACTTCCAGATGACACCAAAATGATGCCTAT
CAAACAGACCTTATTCTTTTCGGAACAAGGAGCGGCCGATGGGAAAGCAA
AGTCAAAACCGGCGAAAAATGGAACCAATATGGTTAATAAAATACCGGAC
TCTATAACTGGAAAGAAACATCTTTTGGGCTTAGGCGAGAGTGACGATTA
CATCAAACAAGCGCAAGAGGAAGAGGACATTGACAAAAACGAAGGTGAGC
AAATCGTGTATCAAAACCCAACTGAAGAAACAACTGAAACTTTTCACAAA
TATTTTTTACCACCCGTAACAGGAGAATACAAATTCTATGCCAAATGTGG
AAGTGACTGTGACGTCATCCTTGGTGATGAAAGTAAACTTTCAGAGGAAA
AAATCATTTCTGTTGATGGTTCCGCTGCAGCTAAGCGAGAATGTCAAGTC
CAGTTTTTTGGCTATTGATTGGTGCTTTCTTATTCTGCTTGATTAATGGA
TCATCAAAGCCAAAAACATCAATCAAACATAAATTGGAGAGCAACCCCAG
CAAGACGCTCTTCAAAAAGTTGGAGCGAGCAGGTCAATTCATTAAAAGTA
TGGAAGACAAAAAGCTAAAGAATGATAAACTCGATTCTGGAATTACCGAT
ATTATCAAAACATTACAAGAAAACTTAAATGGTGTAGAATCAAAATCAAG
ATCAAGTTCATTGTTGGAGGTTGCTGGTATCGATCGTTCACATATCGACG
AAGGTGTCTCCTCTAAAGAGAGGATTATTATCCAACTGATTGATGCTTTG
AAACGGAACTTAATCATGGAGGATAAACATCGGAAGATGAAGGAACACAT
GTATCAACGAAAGTTGGATCGACTGTTTCATGAAGTCAATAAATTAAAAT
CTGTCCTTGGTAACACAAATATAGCTGCCAAAGCTGATTTGAATAAAGTT
GACACGAAAAAGAATAAGTATACTCCACAGAGAAGTAAACCATCCATGAT
TGGTCAGAAACGTCACCAAAAACACATCACAAGACGTCAGCATCGACACC
ATCGTTTAAGAAAGCCAGAACTCAATTTCGTGGATGAAATCGAAGACCCT
AGTCTCATAGATGACGGTCATGTTGAGGCTAGAAATAACGATGACGGCGA
AGATAGTGAGTATCCAATGTCGGTCAGGAAGATAACTCCATCAGCAGCAG
CTGCTTATGAGAAAGCAATCAATCTCATACCAGAATCTGAAGATGATGAA
CTAATGGAGCAAGGACTTGCCAAAGCCTCAACTCCAGAATCTGATATGTC
AGCTATACGCCACAAACAAGCACACTTTGAAATGTTAAATCTAAAGAAGA
AACCTACTCAATCACTAAACAGCATTAAACCAATACATGGAAAAGAAGTC
AGTGCTGGAAAACAACAGAATCCAGATTCTTCTGAAAAACAAATGATGAA
TTCAGGCGATCAAACAAATCCTCAAGAATCCTTATTTGTTGGCAAATCTG
GAAAACCTTCAACATCTAATCAAAGTCTATCACCGGAATATGACAATAGC
AAACAACAAGGCATAGTTGAACAGTTTAATAGCGCTGAGCCCAATCAAAG
AATGAACAATCAAAACTCTGGTAGATTAGAACCCCAGACTGAAGATCAAA
TAAAAAAATTAGCTACAACAAGTTCAGAAAACAAAATTGATAATTCTCAA
TCATCCAATAACCAAAATATCGAGCCAGAAAAAGGCAAAGCTATTAATAG
TGCACAAAATAATGTTCAACCTGAACTTCAAAATCCAGTTGAAGTTAGTA
TTGGTGGAAGTCAGAAAGAGAATCTTCAAAATGATAACCAAATAGGACAA
ATTGAAAATGAAGTCAAGATTAACCCAAACGATATGAAAAAATCGAATGA
TCATTTTGAAACGGATAAACCATTTTATAGACTTGCTAAAGAAGAAAGAC
CCTTATCACCGATGGCTAGCAATGTAGGAGACGCGTTGCCAACGGTGTCA
GAAAGCCAAAGGGCTGCTCACACCGCTGGAAGCTTTATCACGAATGGTAA
CAAAATAGTTCCAAATACTAAGAGTAAGCAATCAGTTGTAAACTTCAAAT
CAGAGGATATAAAAGCCCTTGAAGACAACTTATTTGCCGCCTTTGAAAAA
AGGTTGAAGAACAAAGGACTCGGCACTACTCTTGAATCTTTGCAGAAAAA
CAGAAACAGTGACACTGCAAATATAAGAGACTTTGAAAAGACCGAAAAAA
CTGTAAACCAATTGAATACTGAGAAATCTCCAGCCTTTGATGTCAATGTT
GGAAAAGAATTGGAAACTCAAAAAGACGAACAAATTTCCAGCTGAAACTG
CATCTCACATAATCTACCTCAAGCAAGGTCAGAAATACTTGTTGAAGACG
ACGACAAATTCACCAGCAGGACCAACACCTACGATTGGTGTGCAACTTCC
AGATGACACCAAAATGATGCCTATCAAACAGACCTTATTCTTTTCGGAAC
AAGGAGCGGCCGATGGGAAAGCAAAGTCAAAACCGGCGAAAAATGGAACC
AATATGGTTAATAAAATACCGGACTCTATAACTGGAAAGAAACATCTTTT
GGGCTTAGGCGAGAGTGACGATTACATCAAACAAGCGCAAGAGGAAGAGG
ACATTGACAAAAACGAAGGTGAGCAAATCGTGTATCAAAACCCAACTGAA
GAAACAACTGAAACTTTTCACAAATATTTTTTACCACCCGTAACAGGAGA
ATACAAATTCTATGCCAAATGTGGAAGTGACTGTGACGTCATCCTTGGTG
ATGAAAGTAAACTTTCAGAGGAAAAAATCATTTCTGTTGATGGTTCCGCT
GCAGCTAAGCGAGAATGTCAAGTCCAGTTTTTTGGCTATTGATTGGTGCT
TTCTTATTCTGCTTGATTAATGGATCATCAAAGCCAAAAACATCAATCAA
ACATAAATTGGAGAGCAACCCCAGCAAGACGCTCTTCAAAAAGTTGGAGC
GAGCAGGTCAATTCATTAAAAGTATGGAAGACAAAAAGCTAAAGAATGAT
AAACTCGATTCTGGAATTACCGATATTATCAAAACATTACAAGAAAACTT
AAATGGTGTAGAATCAAAATCAAGATCAAGTTCATTGTTGGAGGTTGCTG
GTATCGATCGTTCACATATCGACGAAGGTGTCTCCTCTAAAGAGAGGATT
ATTATCCAACTGATTGATGCTTTGAAACGGAACTTAATCATGGAGGATAA
ACATCGGAAGATGAAGGAACACATGTATCAACGAAAGTTGGATCGACTGT
TTCATGAAGTCAATAAATTAAAATCTGTCCTTGGTAACACAAATATAGCT
GCCAAAGCTGATTTGAATAAAGTTGACACGAAAAAGAATAAGTATACTCC
ACAGAGAAGTAAACCATCCATGATTGGTCAGAAACGTCACCAAAAACACA
TCACAAGACGTCAGCATCGACACCATCGTTTAAGAAAGCCAGAACTCAAT
TTCGTGGATGAAATCGAAGACCCTAGTCTCATAGATGACGGTCATGTTGA
GGCTAGAAATAACGATGACGGCGAAGATAGTGAGTATCCAATGTCGGTCA
GGAAGATAACTCCATCAGCAGCAGCTGCTTATGAGAAAGCAATCAATCTC
ATACCAGAATCTGAAGATGATGAACTAATGGAGCAAGGACTTGCCAAAGC
CTCAACTCCAGAATCTGATATGTCAGCTATACGCCACAAACAAGCACACT
TTGAAATGTTAAATCTAAAGAAGAAACCTACTCAATCACTAAACAGCATT
AAACCAATACATGGAAAAGAAGTCAGTGCTGGAAAACAACAGAATCCAGA
TTCTTCTGAAAAACAAATGATGAATTCAGGCGATCAAACAAATCCTCAAG
AATCCTTATTTGTTGGCAAATCTGGAAAACCTTCAACATCTAATCAAAGT
CTATCACCGGAATATGACAATAGCAAACAACAAGGCATAGTTGAACAGTT
TAATAGCGCTGAGCCCAATCAAAGAATGAACAATCAAAACTCTGGTAGAT
TAGAACCCCAGACTGAAGATCAAATAAAAAAATTAGCTACAACAAGTTCA
GAAAACAAAATTGATAATTCTCAATCATCCAATAACCAAAATATCGAGCC
AGAAAAAGGCAAAGCTATTAATAGTGCACAAAATAATGTTCAACCTGAAC
TTCAAAATCCAGTTGAAGTTAGTATTGGTGGAAGTCAGAAAGAGAATCTT
CAAAATGATAACCAAATAGGACAAATTGAAAATGAAGTCAAGATTAACCC
AAACGATATGAAAAAATCGAATGATCATTTTGAAACGGATAAACCATTTT
ATAGACTTGCTAAAGAAGAAAGACCCTTATCACCGATGGCTAGCAATGTA
GGAGACGCGTTGCCAACGGTGTCAGAAAGCCAAAGGGCTGCTCACACCGC
TGGAAGCTTTATCACGAATGGTAACAAAATAGTTCCAAATACTAAGAGTA
AGCAATCAGTTGTAAACTTCAAATCAGAGGATATAAAAGCCCTTGAAGAC
AACTTATTTGCCGCCTTTGAAAAAAGGTTGAAGAACAAAGGACTCGGCAC
TACTCTTGAATCTTTGCAGAAAAACAGAAACAGTGACACTGCAAATATAA
GAGACTTTGAAAAGACCGAAAAAACTGTAAACCAATTGAATACTGAGAAA
TCTCCAGCCTTTGATGTCAATGTTGGAAAAGAATTGGAAACTCAAAAAGA
CGAACAAATTTCCAGCTGAAACTGCATCTCACATAATCTACCTCAAGCAA
GGTCAGAAATACTTGTTGAAGACGACGACAAATTCACCAGCAGGACCAAC
ACCTACGATTGGTGTGCAACTTCCAGATGACACCAAAATGATGCCTATCA
AACAGACCTTATTCTTTTCGGAACAAGGAGCGGCCGATGGGAAAGCAAAG
TCAAAACCGGCGAAAAATGGAACCAATATGGTTAATAAAATACCGGACTC
TATAACTGGAAAGAAACATCTTTTGGGCTTAGGCGAGAGTGACGATTACA
TCAAACAAGCGCAAGAGGAAGAGGACATTGACAAAAACGAAGGTGAGCAA
ATCGTGTATCAAAACCCAACTGAAGAAACAACTGAAACTTTTCACAAATA
TTTTTTACCACCCGTAACAGGAGAATACAAATTCTATGCCAAATGTGGAA
GTGACTGTGACGTCATCCTTGGTGATGAAAGTAAACTTTCAGAGGAAAAA
ATCATTTCTGTTGATGGTTCCGCTGCAGCTAAGCGAGAATGTCAAGTCCA
GTTTTTTGGCTATTGATTGGTGCTTTCTTATTCTGCTTGATTAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004819XLOC_004819Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008612-exon-sc0000086-1575043694:432895..433013TCONS_00008612-exon-sc0000086-1575043694:432895..433013Clytia hemisphaericaexon
TCONS_00008612-exon-sc0000086-1575043694:432313..432568TCONS_00008612-exon-sc0000086-1575043694:432313..432568Clytia hemisphaericaexon
TCONS_00008612-exon-sc0000086-1575043694:431869..432143TCONS_00008612-exon-sc0000086-1575043694:431869..432143Clytia hemisphaericaexon
TCONS_00008612-exon-sc0000086-1575043694:429507..431342TCONS_00008612-exon-sc0000086-1575043694:429507..431342Clytia hemisphaericaexon
TCONS_00008612-exon-sc0000086-1510915933:432895..433013TCONS_00008612-exon-sc0000086-1510915933:432895..433013Clytia hemisphaericaexon
TCONS_00008612-exon-sc0000086-1510915933:432313..432568TCONS_00008612-exon-sc0000086-1510915933:432313..432568Clytia hemisphaericaexon
TCONS_00008612-exon-sc0000086-1510915933:431869..432143TCONS_00008612-exon-sc0000086-1510915933:431869..432143Clytia hemisphaericaexon
TCONS_00008612-exon-sc0000086-1510915933:429507..431342TCONS_00008612-exon-sc0000086-1510915933:429507..431342Clytia hemisphaericaexon
TCONS_00008612-exon-sc0000086-1491911889:432895..433013TCONS_00008612-exon-sc0000086-1491911889:432895..433013Clytia hemisphaericaexon
TCONS_00008612-exon-sc0000086-1491911889:432313..432568TCONS_00008612-exon-sc0000086-1491911889:432313..432568Clytia hemisphaericaexon
TCONS_00008612-exon-sc0000086-1491911889:431869..432143TCONS_00008612-exon-sc0000086-1491911889:431869..432143Clytia hemisphaericaexon
TCONS_00008612-exon-sc0000086-1491911889:429507..431342TCONS_00008612-exon-sc0000086-1491911889:429507..431342Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008612-proteinTCONS_00008612-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:429507..433013 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.0840469 0.199245 4.68742 4.81964 0.577708 0.390319 2.3994 1.52539 2.82893 2.60427 1.4952 5.47837 2.0235 2.43368 0.0331257 0.0519955 1.29555 0.947884 0.875374 0.925775 2.69329 2.8516 0.256374 0.0684024 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008612 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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