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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008583 ID=TCONS_00008583|Name=TCONS_00008583|organism=Clytia hemisphaerica|type=transcript|length=2083bp
GGAAAGTCAGTTCAACAATCACAAAAAGATATTCACTAAAAGAGTGGTAA
GAAATCTTAATATATTCAAtcacaaaaattacaaaatatcttgAAAGGCC
ATATTGGAATCAGGAAGTAATGGCAGTTATTGTACCatctttcattttca
atctaAATTTCTTCGACATCCTATTATACGCATTTATAACGCTCATTATC
TATACTGTAATCGTTTACGTCGAGCATTTGGTACAGTTGAAAAATTATCC
TCCTGGTCCCTTCCCAGTTCCCGTACTCGGGAATGTGCACCAAATAGACG
GACGGCGTCCTCAGGAAAGTTTACAGAAGTTTGGTAAAATCTATGGGGAT
GTTTTCTCCATCAGCTTTGGTATGAGTCGTGTTGTGATTGTTAACACAAT
TGAGCCCATGAAAGAAGCTTTATTGAAAAAGTCAGAAGATTTTGCTGGAA
GACCTCAGGATAACTATCTCTTCAAAATGTTGACCAGAGATTTCCAAGAT
GTTGCTGTAGGAGACTAcaataaaaaatggattttacttCGAAAGACAAT
GCTTAGAGGATTAAAAACCTTTgcaaatcattttgaaaaattagagtGCA
AGGTAGCAAGAGAAACAGAGAAATGCCAAAAACGTTTGGCAAAGAAGGAA
ACCAATGGAGAGCCAGTTAACTTGGAGGATGAGTTTGCTTTGATCATTGT
TGGAGTACTTTACTGCATTATGTTTGGCGAAGAGATCAACGAGAATGTTA
ACGAAGGCGATCTCCAAACGATTCTCAACTATATGAAAGTTTTTCATGAT
GCATTCTCTCATGGCAATTTGACCAGCGTTTTTCCTTTGTTACGATTTAT
ACCAATCCCTGAGAATCAAGCTACCAAGAAGCTAAAGGACATAACTGATG
ACTTCTTGAAACAAAAATATGATCATCATTTGGCAACTTTAGATAAAGAG
GATCCTAAATGTTTCTTGGATCATTTGATTTTGACTGCAGAGGAAATTAA
CAAGGAAGGTGAAATACAGATTACCAGAGATAACATCGAACTTGTGTTTG
GAGATATGATGGTGGGAGGAATTGATACCACGGTAGTTAATCTTTTATGG
GCTATCCTGTACCTTCTCCATGATCCTGATGTTCATCAAAAAGCTCTTGA
AGAGATTGAAAGAGTCGTTGGTACTGGCAGATATCCAGAGCTTCAAGATC
GTCCATCGATGCCATATATGATGTCTATCGTCAATGAATCGTTGAGATTG
ACTTCAGGACCTTTCACATTACCACACACAACCACTAAAGCCACATCTGT
CGGTGGACACAACCTGAAGAAAGGAACACCGTGTCTGTTCAATATCTGGA
CAGCTCATCGAGATGAAAAATATTGGGAAAATCCGAACGAATTCAAACCA
TCCAGATGGCTTGACGAAGAAGGCAAGTTTAACCAACATTTACATCCAAG
CTACTTACCTTTTGGACTTGGCAAACGATCTTGTGTTGGTGAAACCACAG
CTCGTCCAGAATTGTTTCTCATTCTATCCCGTCTGATTGTCTCCTTCAAG
ATCTCAGCAAACCCAAACCAACCTTTACCAAAGACATCAGAGGAGATCAT
TGCATCAGTCAAGTATCCATTACCTTATACTGTAATGGTCGAAGAACGAA
AATAAACATTATATGATCTAAAGTTCAACATACACAATTTACATTTAGCC
TGGCTGCGAACCACCTAACTTCCTGTCCAGTTGTTTTCCTTACCTTAGAA
CTCTGAGGCTTGAGCTTTCCAGAACGCCATGGGATCGAGGTTGTGATTGT
CGAAGGCTTATAAATATGCAATATATCGACATGGAAAAATTAGGCAACTC
TTTAAGTAACTTTAACGTTGAAAGctatttaaaagaacaaaagaaaggCT
TTGAATTTTGTTTAAAGGCCGACGCATTCGCAAGAAGCGGCACATTTTCT
GCCTGTAAGGTTTTTTATTGGCAAGTATTTATTTGTACCAtattatttat
ttgacatattatttcaatcttttttaatattttatagaTTGTTTTAGTAA
AACTGAAAATAGATCCTTAATCACCTTTCTAAC Run BLAST on NCBI protein sequence of TCONS_00008583-protein >TCONS_00008583-protein ID=TCONS_00008583-protein|Name=TCONS_00008583-protein|organism=Clytia hemisphaerica|type=polypeptide|length=511bp
MAVIVPSFIFNLNFFDILLYAFITLIIYTVIVYVEHLVQLKNYPPGPFPV
PVLGNVHQIDGRRPQESLQKFGKIYGDVFSISFGMSRVVIVNTIEPMKEA
LLKKSEDFAGRPQDNYLFKMLTRDFQDVAVGDYNKKWILLRKTMLRGLKT
FANHFEKLECKVARETEKCQKRLAKKETNGEPVNLEDEFALIIVGVLYCI
MFGEEINENVNEGDLQTILNYMKVFHDAFSHGNLTSVFPLLRFIPIPENQ
ATKKLKDITDDFLKQKYDHHLATLDKEDPKCFLDHLILTAEEINKEGEIQ
ITRDNIELVFGDMMVGGIDTTVVNLLWAILYLLHDPDVHQKALEEIERVV
GTGRYPELQDRPSMPYMMSIVNESLRLTSGPFTLPHTTTKATSVGGHNLK
KGTPCLFNIWTAHRDEKYWENPNEFKPSRWLDEEGKFNQHLHPSYLPFGL
GKRSCVGETTARPELFLILSRLIVSFKISANPNQPLPKTSEEIIASVKYP
LPYTVMVEERK Run BLAST on NCBI transcript from alignment at sc0000086:844691..848537+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008583 ID=TCONS_00008583|Name=TCONS_00008583|organism=Clytia hemisphaerica|type=transcript|length=3847bp|location=Sequence derived from alignment at sc0000086:844691..848537+ (Clytia hemisphaerica)
GGAAAGTCAGTTCAACAATCACAAAAAGATATTCACTAAAAGAGTGGTAA
GAAATCTTAATATATTCAAtcacaaaaattacaaaatatcttgAAAGGCC
ATATTGGAATCAGGAAGTAATGGCAGTTATTGTACCatctttcattttca
atctaAATTTCTTCGACATCCTATTATACGCATTTATAACGCTCATTATC
TATACTGTAATCGTTTACGTCGAGCATTTGGTACAGTTGAAAAATTATCC
TCCTGGTCCCTTCCCAGTTCCCGTACTCGGGAATGTGCACCAAATAGACG
GACGGCGTCCTCAGGAAAGTTTACAGAAGTTTGGTAAAATCTATGGGGAT
GTTTTCTCCATCAGCTTTGGTATGAGTCGTGTTGTGATTGTTAACACAAT
TGAGCCCATGAAAGAAGCTTTATTGAAAAAGTCAGAAGATTTTGCTGGAA
GACCTCAGGATAACTATCTCTTCAAAATGGTgagtttttcttctttcttt
agacacccctttctcacagacccactggaatcctttcccactggaaaaaa
ttgtccaaaatatcgtccccggtggaaaattgtcctccaatttttgttcc
cactgaaaataatcaaataaaccaatcctcactgcaaaatattgtgctat
ccgggtctgtgagaagagggtgccATTAGAGCTTATCACTCAGATGTTAG
TAAAAGTTGCTTTTGAATTTCATGGACTAACCACAATTTACCATTAACAT
CAACCGCCTCAATGATCTAATGATCCAACGCGCTAAGTATCTGGCCGCGG
AAAATAACTGACAATACTCGGCAATAAGTAAATTTTAGAAAAGACAGCTC
GTCCCCGTTTCCTTTGTTTGTCCCTTTCTTATAATTCTTTGTGTGTTTGG
CGTTTTCTTCATCTTCCACCAGTACAGATCAGGGGTGGAATTTGTCTGGG
TACGAGATTTTCAGAAAACTAAGTtggctttttttaaatgatttatAGGG
CAGAGATGTGTTCAAAACTTTAGTTTCGTATAAAATGATCCTTTTTCGCC
ATTTTCAGTTGACCAGAGATTTCCAAGATGTTGCTGTAGGAGACTAcaat
aaaaaatggattttacttCGAAAGACAATGCTTAGAGGATTAAAAACCTT
TgcaaatcattttgaaaaattagagtGCAAGGTAGCAAGAGAAACAGAGA
AATGCCAAAAACGTTTGGCAAAGAAGGAAACCAATGGAGAGCCAGTTAAC
TTGGAGGATGAGTTTGGTAAGTTTAAACTAATTCATTCTCTTATCTGATC
GACACTTCAACGTTGGAGTGAATCTTTGCCATGACGTACTCTATACTATN
GATCGACACTTCAACGTTGGAGCGAATCTTTGCTATGACGTACTCTGTAC
TAGAGTGTATCTCATGTATAACGTAAaatacggcaatgaattttgaaatt
tctgtaaaaatatcgggTCTGTTTTATTCCCACTGGTTCAAAATCACTCA
ATTAGTCACTGAGAAAGGGACTATAACCTActaccccagctggcacacaa
cgttgttttaacgtttaacgtcagatgaacgttgaaacaatgttgtgtgc
taGCTTGGACAGCTTGCAACTGCAAAGTAACGACGATGCATTTAGGAACT
CCTATCTCCTTTCACActgattgtaatttttttccaaatgtttttttatc
gaaaacgtgcttattttcgattttcgattcTTAAAAGGTGTTTTTGTGCG
TCGTGTAGTAGCACTCTTTTGTGCGTGTTTTACATAGgatcttatttttt
gttttcttacaGCTTTGATCATTGTTGGAGTACTTTACTGCATTATGTTT
GGCGAAGAGATCAACGAGAATGTTAACGAAGGCGATCTCCAAACGATTCT
CAACTATATGAAAGTTTTTCATGATGCATTCTCTCATGGCAATTTGACCA
GCGTTTTTCCTTTGTTACGATTTATACCAATCCCTGAGAATCAAGCTACC
AAGAAGCTAAAGGACATAACTGATGACTTCTTGAAACAAAAATATGATCA
TCATTTGGCAACTTTAGATAAAGAGGATCCTAAATGTTTCTTGGATCATT
TGATTTTGACTGCAGAGGAAATTAACAAGGAAGGTGAAATACAGATTACC
AGAGATAACATCGAACTTGTGTTTGGAGATATGATGGTGGGAGGAATTGA
TACCACGGTAGTTAATCTTTTATGGGCTATCCTGTACCTTCTCCATGATC
CTGATGTTCATCAAAAAGCTCTTGAAGAGATTGAAAGAGTCGTTGGTACT
GGCAGATATCCAGAGCTTCAAGATCGTCCATCGATGCCATATATNATGct
tattttcgattttcgattcTTAAAAGGTGTTTTTGTGCGTCGTGTAGTTG
CACTCTTTTGTGCGTGTTTTACATAGgatcttattttttgttttcttaca
GCTTTGATCATTGTTGGAGTACTTTACTGCATTATGTTTGGCGAAGAGAT
CAACGAGAATGTTAACGAAGGCGATCTCCAAACGATTCTCAACTATATGA
AAGTTTTTCATGATGCATTCTCTCATGGCAATTTGACCAGCGTTTTTCCT
TTGTTACGATTTATACCAATCCCTGAGAATCAAGCTACCAAGAAGCTAAA
GGACATAACTGATGACTTCTTGAAACAAAAATATGATCATCATTTGGCAA
CTTTAGATAAAGAGGATCCTAAATGTTTCTTGGATCATTTGATTTTGACT
GCAGAGGAAATTAACAAGGAAGGTGAAATACAGATTACCAGAGATAACAT
CGAACTTGTGTTTGGAGATATGATGGTGGGAGGAATTGATACCACGGTAG
TTAATCTTTTATGGGCTATCCTGTACCTTCTCCATGATCCTGATGTTCAT
CAAAAAGCTCTTGAAGAGATTGAAAGAGTCGTTGGTACTGGCAGATATCC
AGAGCTTCAAGATCGTCCATCGATGCCATATATGATGTCTATCGTCAATG
AATCGTTGAGATTGACTTCAGGACCTTTCACATTACCACACACAACCACT
AAAGCCACATCTGTCGGTGGACACAACCTGAAGAAAGGAACACCGTGTCT
GTTCAATATCTGGACAGCTCATCGAGATGAAAAATATTGGGAAAATCCGA
ACGAATTCAAACCATCCAGATGGCTTGACGAAGAAGGCAAGTTTAACCAA
CATTTACATCCAAGCTACTTACCTTTTGGACTTGGCAAACGATCTTGTGT
TGGTGAAACCACAGCTCGTCCAGAATTGTTTCTCATTCTATCCCGTCTGA
TTGTCTCCTTCAAGATCTCAGCAAACCCAAACCAACCTTTACCAAAGACA
TCAGAGGAGATCATTGCATCAGTCAAGTATCCATTACCTTATACTGTAAT
GGTCGAAGAACGAAAATAAACATTATATGATCTAAAGTTCAACATACACA
ATTTACATTTAGCCTGGCTGCGAACCACCTAACTTCCTGTCCAGTTGTTT
TCCTTACCTTAGAACTCTGAGGCTTGAGCTTTCCAGAACGCCATGGGATC
GAGGTTGTGATTGTCGAAGGCTTATAAATATGCAATATATCGACATGGAA
AAATTAGGCAACTCTTTAAGTAACTTTAACGTTGAAAGctatttaaaaga
acaaaagaaaggCTTTGAATTTTGTTTAAAGGCCGACGCATTCGCAAGAA
GCGGCACATTTTCTGCCTGTAAGGTTTTTTATTGGCAAGTATTTATTTGT
ACCAtattatttatttgacatattatttcaatcttttttaatattttata
gaTTGTTTTAGTAAAACTGAAAATAGATCCTTAATCACCTTTCTAAC Coding sequence (CDS) from alignment at sc0000086:844691..848537+ >TCONS_00008583 ID=TCONS_00008583|Name=TCONS_00008583|organism=Clytia hemisphaerica|type=CDS|length=4608bp|location=Sequence derived from alignment at sc0000086:844691..848537+ (Clytia hemisphaerica)
ATGGCAGTTATTGTACCatctttcattttcaatctaAATTTCTTCGACAT
CCTATTATACGCATTTATAACGCTCATTATCTATACTGTAATCGTTTACG
TCGAGCATTTGGTACAGTTGAAAAATTATCCTCCTGGTCCCTTCCCAGTT
CCCGTACTCGGGAATGTGCACCAAATAGACGGACGGCGTCCTCAGGAAAG
TTTACAGAAGTTTGGTAAAATCTATGGGGATGTTTTCTCCATCAGCTTTG
GTATGAGTCGTGTTGTGATTGTTAACACAATTGAGCCCATGAAAGAAGCT
TTATTGAAAAAGTCAGAAGATTTTGCTGGAAGACCTCAGGATAACTATCT
CTTCAAAATGTTGACCAGAGATTTCCAAGATGTTGCTGTAGGAGACTAca
ataaaaaatggattttacttCGAAAGACAATGCTTAGAGGATTAAAAACC
TTTgcaaatcattttgaaaaattagagtGCAAGGTAGCAAGAGAAACAGA
GAAATGCCAAAAACGTTTGGCAAAGAAGGAAACCAATGGAGAGCCAGTTA
ACTTGGAGGATGAGTTTGCTTTGATCATTGTTGGAGTACTTTACTGCATT
ATGTTTGGCGAAGAGATCAACGAGAATGTTAACGAAGGCGATCTCCAAAC
GATTCTCAACTATATGAAAGTTTTTCATGATGCATTCTCTCATGGCAATT
TGACCAGCGTTTTTCCTTTGTTACGATTTATACCAATCCCTGAGAATCAA
GCTACCAAGAAGCTAAAGGACATAACTGATGACTTCTTGAAACAAAAATA
TGATCATCATTTGGCAACTTTAGATAAAGAGGATCCTAAATGTTTCTTGG
ATCATTTGATTTTGACTGCAGAGGAAATTAACAAGGAAGGTGAAATACAG
ATTACCAGAGATAACATCGAACTTGTGTTTGGAGATATGATGGTGGGAGG
AATTGATACCACGGTAGTTAATCTTTTATGGGCTATCCTGTACCTTCTCC
ATGATCCTGATGTTCATCAAAAAGCTCTTGAAGAGATTGAAAGAGTCGTT
GGTACTGGCAGATATCCAGAGCTTCAAGATCGTCCATCGATGCCATATAT
GATGTCTATCGTCAATGAATCGTTGAGATTGACTTCAGGACCTTTCACAT
TACCACACACAACCACTAAAGCCACATCTGTCGGTGGACACAACCTGAAG
AAAGGAACACCGTGTCTGTTCAATATCTGGACAGCTCATCGAGATGAAAA
ATATTGGGAAAATCCGAACGAATTCAAACCATCCAGATGGCTTGACGAAG
AAGGCAAGTTTAACCAACATTTACATCCAAGCTACTTACCTTTTGGACTT
GGCAAACGATCTTGTGTTGGTGAAACCACAGCTCGTCCAGAATTGTTTCT
CATTCTATCCCGTCTGATTGTCTCCTTCAAGATCTCAGCAAACCCAAACC
AACCTTTACCAAAGACATCAGAGGAGATCATTGCATCAGTCAAGTATCCA
TTACCTTATACTGTAATGGTCGAAGAACGAAAATAAATGGCAGTTATTGT
ACCatctttcattttcaatctaAATTTCTTCGACATCCTATTATACGCAT
TTATAACGCTCATTATCTATACTGTAATCGTTTACGTCGAGCATTTGGTA
CAGTTGAAAAATTATCCTCCTGGTCCCTTCCCAGTTCCCGTACTCGGGAA
TGTGCACCAAATAGACGGACGGCGTCCTCAGGAAAGTTTACAGAAGTTTG
GTAAAATCTATGGGGATGTTTTCTCCATCAGCTTTGGTATGAGTCGTGTT
GTGATTGTTAACACAATTGAGCCCATGAAAGAAGCTTTATTGAAAAAGTC
AGAAGATTTTGCTGGAAGACCTCAGGATAACTATCTCTTCAAAATGTTGA
CCAGAGATTTCCAAGATGTTGCTGTAGGAGACTAcaataaaaaatggatt
ttacttCGAAAGACAATGCTTAGAGGATTAAAAACCTTTgcaaatcattt
tgaaaaattagagtGCAAGGTAGCAAGAGAAACAGAGAAATGCCAAAAAC
GTTTGGCAAAGAAGGAAACCAATGGAGAGCCAGTTAACTTGGAGGATGAG
TTTGCTTTGATCATTGTTGGAGTACTTTACTGCATTATGTTTGGCGAAGA
GATCAACGAGAATGTTAACGAAGGCGATCTCCAAACGATTCTCAACTATA
TGAAAGTTTTTCATGATGCATTCTCTCATGGCAATTTGACCAGCGTTTTT
CCTTTGTTACGATTTATACCAATCCCTGAGAATCAAGCTACCAAGAAGCT
AAAGGACATAACTGATGACTTCTTGAAACAAAAATATGATCATCATTTGG
CAACTTTAGATAAAGAGGATCCTAAATGTTTCTTGGATCATTTGATTTTG
ACTGCAGAGGAAATTAACAAGGAAGGTGAAATACAGATTACCAGAGATAA
CATCGAACTTGTGTTTGGAGATATGATGGTGGGAGGAATTGATACCACGG
TAGTTAATCTTTTATGGGCTATCCTGTACCTTCTCCATGATCCTGATGTT
CATCAAAAAGCTCTTGAAGAGATTGAAAGAGTCGTTGGTACTGGCAGATA
TCCAGAGCTTCAAGATCGTCCATCGATGCCATATATGATGTCTATCGTCA
ATGAATCGTTGAGATTGACTTCAGGACCTTTCACATTACCACACACAACC
ACTAAAGCCACATCTGTCGGTGGACACAACCTGAAGAAAGGAACACCGTG
TCTGTTCAATATCTGGACAGCTCATCGAGATGAAAAATATTGGGAAAATC
CGAACGAATTCAAACCATCCAGATGGCTTGACGAAGAAGGCAAGTTTAAC
CAACATTTACATCCAAGCTACTTACCTTTTGGACTTGGCAAACGATCTTG
TGTTGGTGAAACCACAGCTCGTCCAGAATTGTTTCTCATTCTATCCCGTC
TGATTGTCTCCTTCAAGATCTCAGCAAACCCAAACCAACCTTTACCAAAG
ACATCAGAGGAGATCATTGCATCAGTCAAGTATCCATTACCTTATACTGT
AATGGTCGAAGAACGAAAATAAATGGCAGTTATTGTACCatctttcattt
tcaatctaAATTTCTTCGACATCCTATTATACGCATTTATAACGCTCATT
ATCTATACTGTAATCGTTTACGTCGAGCATTTGGTACAGTTGAAAAATTA
TCCTCCTGGTCCCTTCCCAGTTCCCGTACTCGGGAATGTGCACCAAATAG
ACGGACGGCGTCCTCAGGAAAGTTTACAGAAGTTTGGTAAAATCTATGGG
GATGTTTTCTCCATCAGCTTTGGTATGAGTCGTGTTGTGATTGTTAACAC
AATTGAGCCCATGAAAGAAGCTTTATTGAAAAAGTCAGAAGATTTTGCTG
GAAGACCTCAGGATAACTATCTCTTCAAAATGTTGACCAGAGATTTCCAA
GATGTTGCTGTAGGAGACTAcaataaaaaatggattttacttCGAAAGAC
AATGCTTAGAGGATTAAAAACCTTTgcaaatcattttgaaaaattagagt
GCAAGGTAGCAAGAGAAACAGAGAAATGCCAAAAACGTTTGGCAAAGAAG
GAAACCAATGGAGAGCCAGTTAACTTGGAGGATGAGTTTGCTTTGATCAT
TGTTGGAGTACTTTACTGCATTATGTTTGGCGAAGAGATCAACGAGAATG
TTAACGAAGGCGATCTCCAAACGATTCTCAACTATATGAAAGTTTTTCAT
GATGCATTCTCTCATGGCAATTTGACCAGCGTTTTTCCTTTGTTACGATT
TATACCAATCCCTGAGAATCAAGCTACCAAGAAGCTAAAGGACATAACTG
ATGACTTCTTGAAACAAAAATATGATCATCATTTGGCAACTTTAGATAAA
GAGGATCCTAAATGTTTCTTGGATCATTTGATTTTGACTGCAGAGGAAAT
TAACAAGGAAGGTGAAATACAGATTACCAGAGATAACATCGAACTTGTGT
TTGGAGATATGATGGTGGGAGGAATTGATACCACGGTAGTTAATCTTTTA
TGGGCTATCCTGTACCTTCTCCATGATCCTGATGTTCATCAAAAAGCTCT
TGAAGAGATTGAAAGAGTCGTTGGTACTGGCAGATATCCAGAGCTTCAAG
ATCGTCCATCGATGCCATATATGATGTCTATCGTCAATGAATCGTTGAGA
TTGACTTCAGGACCTTTCACATTACCACACACAACCACTAAAGCCACATC
TGTCGGTGGACACAACCTGAAGAAAGGAACACCGTGTCTGTTCAATATCT
GGACAGCTCATCGAGATGAAAAATATTGGGAAAATCCGAACGAATTCAAA
CCATCCAGATGGCTTGACGAAGAAGGCAAGTTTAACCAACATTTACATCC
AAGCTACTTACCTTTTGGACTTGGCAAACGATCTTGTGTTGGTGAAACCA
CAGCTCGTCCAGAATTGTTTCTCATTCTATCCCGTCTGATTGTCTCCTTC
AAGATCTCAGCAAACCCAAACCAACCTTTACCAAAGACATCAGAGGAGAT
CATTGCATCAGTCAAGTATCCATTACCTTATACTGTAATGGTCGAAGAAC
GAAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008583-exon-sc0000086-1491911889:844691..845169 | TCONS_00008583-exon-sc0000086-1491911889:844691..845169 | Clytia hemisphaerica | exon |
| TCONS_00008583-exon-sc0000086-1510915933:844691..845169 | TCONS_00008583-exon-sc0000086-1510915933:844691..845169 | Clytia hemisphaerica | exon |
| TCONS_00008583-exon-sc0000086-1575043694:844691..845169 | TCONS_00008583-exon-sc0000086-1575043694:844691..845169 | Clytia hemisphaerica | exon |
| TCONS_00008583-exon-sc0000086-1491911889:845749..845956 | TCONS_00008583-exon-sc0000086-1491911889:845749..845956 | Clytia hemisphaerica | exon |
| TCONS_00008583-exon-sc0000086-1510915933:845749..845956 | TCONS_00008583-exon-sc0000086-1510915933:845749..845956 | Clytia hemisphaerica | exon |
| TCONS_00008583-exon-sc0000086-1575043694:845749..845956 | TCONS_00008583-exon-sc0000086-1575043694:845749..845956 | Clytia hemisphaerica | exon |
| TCONS_00008583-exon-sc0000086-1491911889:847142..848537 | TCONS_00008583-exon-sc0000086-1491911889:847142..848537 | Clytia hemisphaerica | exon |
| TCONS_00008583-exon-sc0000086-1510915933:847142..848537 | TCONS_00008583-exon-sc0000086-1510915933:847142..848537 | Clytia hemisphaerica | exon |
| TCONS_00008583-exon-sc0000086-1575043694:847142..848537 | TCONS_00008583-exon-sc0000086-1575043694:847142..848537 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086 | supercontig | sc0000086:844691..848537 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005506 | iron ion binding |
| GO:0020037 | heme binding |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0020037 |
heme binding |
| molecular_function |
GO:0005506 |
iron ion binding |
| molecular_function |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Blast
BLAST of TCONS_00008583 vs. Swiss-Prot (Human)
Match: CP1A1 (Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 7.569e-67 Identity = 141/451 (31.26%), Postives = 235/451 (52.11%), Query Frame = 3
Query: 237 LKNYPPGPFPVPVLGNVHQIDGRRPQESLQKFGKIYGDVFSISFGMSRVVIVNTIEPMKEALLKKSEDFAGRPQDNYLFKMLTRDFQDVAVGDYNKKWILLRKTMLRGLKTFANHFEK-------LECKVARETEKCQKRLAKKETNGEPVNLEDEFALIIVGVLYCIMFGEEINENVNEGDLQTILNYMKVFHDAFSHGNLTSVFPLLRFIPIPENQATKKLKDITDDFLKQKYDHHLATLDKEDPKCFLDHLILTAEE--INKEGEIQITRDNIELVFGDMMVGGIDTTVVNLLWAILYLLHDPDVHQKALEEIERVVGTGRYPELQDRPSMPYMMSIVNESLRLTS-GPFTLPHTTTKATSVGGHNLKKGTPCLFNIWTAHRDEKYWENPNEFKPSRWLDEEGKFNQHLHPSYLPFGLGKRSCVGETTARPELFLILSRLIVSFKISA 1559
LKN PPGP+ P++G++ + G+ P +L + + YGDV I G + VV+++ ++ +++AL+++ +DF GRP D Y F +++ D W R+ GLK+F+ + LE V++E E L + N + + V+ I FG + N E L +++N F + GN P+LR++P P A K L + F+++ H T +K + D LI +E +++ +Q++ + I + D+ G DT + W+++YL+ +P V +K EE++ V+G R P L DR +PYM + + E+ R +S PFT+PH+TT+ TS+ G + KG N W + D+K W NP+EF P R+L +G ++ L + FG+GKR C+GET AR E+FL L+ L+ + S
Sbjct: 37 LKN-PPGPWGWPLIGHMLTL-GKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRP-DLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQE--LLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSV 482
The following BLAST results are available for this feature:
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