TCONS_00008525 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008525
Unique NameTCONS_00008525
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2301

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008525 ID=TCONS_00008525|Name=TCONS_00008525|organism=Clytia hemisphaerica|type=transcript|length=2301bp
CTGTATTTACCCCTCTATTTTAACTGTCCCGTAATTACTCCAGGTTACTA
TACAGAGTATAAACTCACCTTTTGAAACGATATAAACTTCATAGGATCTA
TTAGAGGTATTCTTTATGGGAGCTGCTTGTCTCTTTATCTAAGTATCTTA
TGAAATGTTTAAATGGTGTCTgcttatatttatttttttttaatcataac
aTAACACCTACCCACTTCCTCCTTGAAATCCTTTTCATTACACTTTACTT
TTAGTATTTTTAGGTATTAGATAATATGCTGTTATTAAAAGTACTATTAT
CATGGCATCAAGAAGCAACAGAAGAGGAATcaacaagaaaaagaattttg
tgaaaaatccaATTCATTCTGAAGGATATGACGTGGAAATCATTGACACA
AAACTTGACAGTGAAAGTCAGATATGCATCATATGTAATTTGTTGATGAG
GAATCCAGTGCAAGGAATCCCTTTGGTGGAAGATGGTGAATCTTGTGGAC
ATCGCTTTTGTAAAGCTTGCTTGGAAAGATGGCATAAAGAATGCAAATAC
CCTGAATGTCCAACTTGTCGACAACTAATTAAGGCGTTCCCAGATGCAGC
TGTTGAGCGGAAAATACTTGATCTGAAAATCAAATGCACCAATTATATAA
AaggttgcaagcaaaatatggAACTCCGTGACTTGGAGAAACACATCATG
TCATGCGACTATGAAGAAATACTTTGCACTCTCAcatgtggtaaaaaact
gatgagGAAAGAGATGGAAGACCATGTGAAGAACATTTGTAAGGAGCGTC
TGAAAGATTGCCAATTCAAAAATATCGGATGTACTTTTAAGGGAAACCCA
TCATCACTGAAAGATCATGCCCTTCAAGCTACCAACAAACACTTGACACT
TGCTATTCAATCACGTgatcaaatttcagccaatcaggAAAAGAAGATTG
ATGTATTGCAAAGAGAACTCGAAACAtctaaaaaacaaataaaagaattg
aaatgtAGCAACAATGAGAAATTAAAAACGTTGCAAAATGACCTTTATAA
CCAAATCAAATTGATGGATGAGGGAACTATGTCAGATATTGGCGTTCTGC
ATGCTGTCAACAAACACTTGTCACTCTCAATTCAATCACGTGATTTAACt
tcagccaatcaaaataagaagaTTGAGTCATTGCAACAAGAACTCAAAGC
CGTAAAAAAATCAAACCGAGACTTGGAAACAAAGATGACGGAATCGAAAT
TTATCaatgaaaatcaattaaaaaagtttaataatGACAATAAACTGGGT
TTCATGGTGGAAGACTTAAACGCAAAAACAGATAAATTAGAAGATGGAAT
GGATACTAATTCACAGCGCTCTCAATTTGAGATTAAGATTATAAAGAAGC
TGatgaaaactcaaaataattctgTTGATTCATTAGAAGAGCGAATGGAA
CAACAGGAAAAAACATCGAGACATCTTTCTGGAAAGTTAGATCGTGACAA
ACAGGAGTTTGCAAGAGAACAAGAACGTATCAATACAGAGTTAAGATGGA
AACAAAAGGAGATAAATCAATTACGTGATGAGCTAACCAGCTCTAGAATG
TTTATAAAATTGAATgcactttttgtttttctgttatTCTGTTTCATTGT
TTGGGTTTACAAGGAATCACTAGATGCTGTTAATGTGTACAACCAATCTG
TTTCACAGAGCAAGAATCAAATCCTTCAATATATAGATAATTTATTGTCG
GATCGGAGTAAATTGCCAGAGCCTAAAGACTCTAAGAACCCTAAAGACTC
TAAGAACCCTAAAGACTTGTTTGACCAGAGATTTGGAGCATTTTTTGCTC
TCATCGTCATGTTGTTCTTCGCTATCATATCAGTGCTCTTTGCTATCATA
TTAGCACCATTCTACCTGCTTTTTTTGGCATTAATGGAATTAAAAAAGTA
CATTATGGAATATGTTTATCAGTAGCAGAACGAAACCCAAATTAAAGGAT
TTAAATTAACTGTTGCACAACCCGTAGACCACGATTCGTGAGTTGTTTGC
TGTTTGTTGACTCCAATTTTGTTGTGGTTTGCGATGATTGAACAATTATT
TTACATCGGTTTATTTCAAATaccaattaaaggttttgtttttacataag
tgttcccgtttcatatcagacacatctttcatatcaggacagtgtcttcc
tattgttatattatgctgatataagcaaaaaactgcttttcttttcctct
ttctgaccaatcttgctccacatctgtgtcaatccaatgtgaaaaagctt
g
Run BLAST on NCBI

protein sequence of TCONS_00008525-protein

>TCONS_00008525-protein ID=TCONS_00008525-protein|Name=TCONS_00008525-protein|organism=Clytia hemisphaerica|type=polypeptide|length=557bp
MASRSNRRGINKKKNFVKNPIHSEGYDVEIIDTKLDSESQICIICNLLMR
NPVQGIPLVEDGESCGHRFCKACLERWHKECKYPECPTCRQLIKAFPDAA
VERKILDLKIKCTNYIKGCKQNMELRDLEKHIMSCDYEEILCTLTCGKKL
MRKEMEDHVKNICKERLKDCQFKNIGCTFKGNPSSLKDHALQATNKHLTL
AIQSRDQISANQEKKIDVLQRELETSKKQIKELKCSNNEKLKTLQNDLYN
QIKLMDEGTMSDIGVLHAVNKHLSLSIQSRDLTSANQNKKIESLQQELKA
VKKSNRDLETKMTESKFINENQLKKFNNDNKLGFMVEDLNAKTDKLEDGM
DTNSQRSQFEIKIIKKLMKTQNNSVDSLEERMEQQEKTSRHLSGKLDRDK
QEFAREQERINTELRWKQKEINQLRDELTSSRMFIKLNALFVFLLFCFIV
WVYKESLDAVNVYNQSVSQSKNQILQYIDNLLSDRSKLPEPKDSKNPKDS
KNPKDLFDQRFGAFFALIVMLFFAIISVLFAIILAPFYLLFLALMELKKY
IMEYVYQ
Run BLAST on NCBI

transcript from alignment at sc0000086:5233..18191+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008525 ID=TCONS_00008525|Name=TCONS_00008525|organism=Clytia hemisphaerica|type=transcript|length=12959bp|location=Sequence derived from alignment at sc0000086:5233..18191+ (Clytia hemisphaerica)
CTGTATTTACCCCTCTATTTTAACTGTCCCGTAATTACTCCAGGTTACTA
TACAGAGTATAAACTCACCTTTTGAAACGATATAAACTTCATAGGATCTA
TTAGAGGTATTCTTTATGGGAGCTGCTTGTCTCTTTATCTAAGTATCTTA
TGAAATGTTTAAATGGTGTCTgcttatatttatttttttttaatcataac
aTAACACCTACCCACTTCCTCCTTGAAATCCTTTTCATTACACTTTACTT
TTAGTATTTTTAGGTATTAGATAATATGCTGTTATTAAAAGTACTATTAT
CATGGCATCAAGAAGCAACAGAAGAGGAATcaacaagaaaaagaattttg
tgaaaaatccaATTCATTCTGAAGGATATGACGTGGAAATCATTGACACA
AAACTTGACAGTGAAAGTCAGATATGCATCATATGTAATTTGTTGATGAG
GAATCCAGTGCAAGGAATCCCTTTGGTGGAAGATGGTGAATCTTGTGGAC
ATCGCTTTTGTAAAGCTTGCTTGGAAAGATGGCATAAAGAATGCAAGTAA
GTATCCTCTGTGCGTGTAAGTGTTTCATATTACGAATAACAGTAAGGAAA
TCTCGCCAAGGATTGAGTCTGATAATTTGACGTTTGATAAATAAACCCAA
AGGATTTTCCCCGGGCACTCGATCTGATGACTGCAGTATGGGAAGAAAAT
TAGGGTCTCAAAATGAAACCCTCACGACGGTTCAGAGAAGATTTAGAAAA
TCTCATAATAatacattttcttgaaaactatTGTctgttttaagggctct
gaccatagtgaattttgatatttgtcatgtacaaaatataatcttctgcc
tgatgtagctaacaaaactttgacatgttatacattttctgttaggcaaA
CTATCCTTGAGATTCTAAAATTTATGAAtcgcaaagaaaaaatttgatga
agaagaaaatgaagacttttgcgacgaagagtatttcaactttgaagagc
ttagttttgtcgaagaagaaatattttgaaaaaacttttgtggTAGATGG
TGTATACTTTACAGAACTActgtaaaaatatatttttggatAATTCTTCT
AAAAGCTTACTTGTCTCAAAGCTTTTTGACctatttttcatcccaattgt
tcatagaaaaacagctattacttttgatgcatcaatttagaaaattttcc
gaaGAATTTAAAAAAGCATAATTACCCATTAGAACTTAGCACTTTTCATA
AAAGAAGGTGATCATGAATTCCATGAGAAAATTAACATctaggtcaaaat
ttcaaattcagaaataacataagttttcattttctcttgaatATACATAT
ATTGAAGTGTGAGAATCCAGAGAATCTTTCTTTAAAGTCCATTTTTCATG
CTTCTGTGCTGGGGTGcctttaatacaaaaaaatacaaaattgcttgaaa
aaaccaAGAACTTTGCCAGAAACCTTTTTCATCCAAATATGATTGTATCA
GTACACAAATCTGTGATAGAGTACTGACAACCATTATAGAAAACATCAAT
AATCAAAATCTGCTTTGCTTAACTCCTATTtggtttttttctggctgtTA
TGCATGCCTACCCGACTGTCCGTTAGTCACACTGATAAGaagaaaagttc
caatgaaagccAAGGGAAGCTGCATGTTTCTTTTACTTTTGTCTTAAAAA
CAGAAGTACTATGACCATAAAAtaagtgcaaaattttagccctaTAGGTT
GAGTCGGCAGCTCACAAGAGGCTCATCAAGaagtgtccgttagtcacgaa
aatCATCCTACCTgagatgaaattttcattagatcactttttcaaaatgg
ttggTCTCTAACACCTTATTGCAAACAAATTTAGGCTAAACTTaccaaaa
atgaagaatttttccACTAAAAGTTGTTTTCTGTTAGTAAACATGGCaat
tgtccgttagtcacgaaatagatttactagcaagtagctttcgctatgat
gctcccgatgacaggcatttgacagtgattgatcgaaattcagaaaaggc
gaaatgctgtgtttatttttgtcagaaatacagTGATATTGCGaagaatt
caatttttctcagcCATAGCTTGCACTAAACATGCCCCCTTTAATAGATA
CCTTATAAAGCTTGaattaaaaagcttttcatgttttataggcAGGGTCT
TGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNaattctacaccctattaggagcata
atatcaaaaatttgccctgatctaaggggtgccctacgaagtgacacaat
ccactgcctcggccgctggtctacataacatgaaatatccttcaggaatt
tctccaacaaaaggagtgttaatgtcaagtttgtggatataccgtcaact
gctctaaaatgggattacttgagataacatgggacatactgctttctggt
tggctttttctctctatcgtcacatcctcttcaacaacaaacagatccat
gtttcttggacagtacaaaaaaaatgattctgtggaggttcggttaaaat
ggttgctgttttggtgtcccattgcacaaacattgcacagctccattaaa
aacgcagacaattcattccaattcttgNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGA
TTCTGGTAAAGTTGAATTATGTTCGAACGACCCTGCTGATTCCCCGGACT
CCAGGGATTTTCTTGTTGCGTGTCCGAGGATTTTAACATTATTTTTTGAG
ACTTACCCCGGACTGAATGCGTGGTCTGCGAGACGTACTTAAACAATTGG
GCGATCACACATGGGTGTCAATTTCGCCATCCCTATTCTGCCCGGCTTTC
ATGCGAACTTTAGTCGACCGTGCGTTAACTTGTGAAAACACGTTCACTTA
TCCAGCCGCGTGGTTCACTTATCTGGCAGCGCAATTTGTTTGTctgggga
tagaaatatttcttttgttcGACAGGGTCGTCTTCGATCAGGTTCAGTAA
CCAAACACCTAGTTtgattctgtttgataaaatttgatagttcaattacg
taaatttggatcaattgaattcacagaaggttcgttaatggtggtatgca
aagttttttccaatttttgataATGATTACCCAAAAGTAACAGTAAAAAA
GTAACTGATGATGCCTGATTATACAACAAGgataaagcaaaaagaaattc
tttaaaataattttcaatcatacatcctatctgaaatattacttttccta
tctgaaacattacttttgataaaatagtattATACTTACTATCAAAGTTG
CAGAACAGTTTTATACCTTCTACTTTCTGAAACCAACTGGTCCCAAGTTG
CTTCTTTGCTTtttgttgtattccaagctatgactttggagcgctaAAGA
CGCTAAATTTCTGTTCATGCGGTcttgttgtattccaagctatgactttg
gagcgccaaaaacgcaaaatatCTGTTCGCGCGGTCGAGCTAGCTTAAAA
GCTCACCACACGGCAATCTTTTAGAGGCGGTCACTAGGTTACATCGTccc
tttttttttcttgaacaatttttcgccaGCTCGATCCCCAGCACGGCCTC
GTGAAGCAACATAGGCTCCCTTCGGGAGCAAAAATTCAGAGTTCGGAGAA
TATAATAGACGGCACTCGCTTAAAAAACCatgtattttgttcttatttaa
aaaagctATTTTGACTATATTTACCCATTTTACCCATAGATATATATAAA
ATAATCAATCCTTTCTTTGTGTGTGCATTTACattttcgtgactaacgga
ctaGTTGTCATAAGAGGGAGAATAATCTTTTtccaaagtaaataaataaa
ataccctTACCCAAGTTGTCTGTCGTTGTCCTGATTTAACAAAGAAACAA
TGCAGTGCAAAAACACCCATAAAACCTCAACAGatctttatatttcaaaa
ttttcaaatttttgggatcTATGAACTTGATAGGAATGGTACCACACAga
gaaaaatgagaattcttctattcttttaggcttttgtcattCTATTGATA
TAACATTTCACCCCTAAAGCACCAAATATAGGAATGGTTGGATTGGCTCG
TCATTAAAAACCGttttgtccgttagtcacgtttttaaatgtccgttagt
cacagcattttttgcccaatttttgtcatattttcttactttgacaattt
tttttcaaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNacaattttttttcaaaattaattttgaaacataa
aattcaacctttcctctagtgaatttaagcaaaaaacccaACCTGTAGCT
TTAGGAACAGCACTTTACAACTATTTGTAAAAGTGTCCCATTTTAGATGT
CAATTTttgtgtccgttagtcacgggcCTATTAATTGCAATTTCTGACCA
AGTGAAAGTCaagagaaaaagttttatatGGTTCTTGAAACTTTGACCCC
CACTGATAGTTACCACACCAAAAGaagttttattcctattttcaagCTTG
ACTTGTAGCATGTTAATAAACAGTGGAGatgtccgttagtcacatatGGA
ATTCATGTGATACAACATATTATTATcgtctttttaaagttgatGGTATT
TGATCAAAAAGCAATTAATAggcaattctttttttaaaaagtgtaaagga
acctgaaacataacttttataatcaaataccaaaatcaattttttgacta
tggtcagagcccttaagaatggacagattttctaaaatttgcccAAGCGT
GCTTGTGTGGAAGACTAAAAAACGTACCCTTAACAAGGACGGCTCACCCA
GGTTTTTCATATCCTGTTTCATgctatttttcttcttttaggagttgaaa
ttcttctttttttttagttgcctttgaatttctttctaTTATAATTAAAA
TGCAAGATAACATTTTACTTATTTCACTATTTCAGATACCCTGAATGTCC
AACTTGTCGACAACTAATTAAGGTATTAtttatttaataaaatattGTTA
AGGCGTATAAATGTATGGTTAAAAGGATTTTGATATTTGATAGTCTTTac
gttgaatttctattgttttcaagtaaaaatttgaaaactcaaagtcgaat
atctcagctttaaaaaataattcaggggggggggcacgcagttactacaa
gacagtatgacacttactaccgtggtggtactgtattcagaagttatgaa
aacagttactacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNtgtttgggggtggtgccaaacactaaaactagcact
tttggtgtagtaagtgcttatattttaattctttttaaagaactttcaaa
atttttcacaaaaaaagaatttttttgtgaaaaaattcttagtNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNttaaccaagtaaattaaaagaaaatctagcacaaaaat
ggctttaggttgaaaaataatcgcaatttagggtaatttcNNNNNNatca
ctcaaaaacaggggtggtacctggaaatcttttctgaaaacagttactac
caaggtgtagtaactgcaaagggtggtggtcctgaaaaaaagtgttaaaa
aagcacttactacacatcgtgtcttgtagtaactgcgtgccccccccctg
aATAATTGGGTCTTTATAGGTGTTTTTTGGGACCATACTCTACAAAGCCA
AATATCGAAAATCATCTAATAACCCCTTTAGATAGATTTTGTATATGACT
TCCACTTCTCTTTCAACAGGCAAACAAGCTACagtatattttatttctca
agaTACATCAATCTCCAATAACAAAGTGGTTTATTGATTTAAAATATACA
TATTAAAgtaataaaatttctttcctttccaTTTCCTTTCCAAATTCTTT
TCTTCTCATAGGCGTTCCCAGATGCAGCTGTTGAGCGGAAAATACTTGAT
CTGAAAATCAAATGCACCAATTATATAAAaggttgcaagcaaaatatggA
ACTCCGTGACTTGGAGGTACTTAATATGTTTTTTTCAAGAGACCTTTTTA
ACTGGGTCGCTGAGTGCACAGAGCGGATGTTCGCTGAGAGATGTTATATT
TTGAACTGGCTTTGAATTCATAGGGGCTAAGtctcttttttggacctacc
tggaggctGGAGGTcttataaattaacctgtgttcgtccgtttgtctgtt
acaaacttttctcgggattgaatcattaggaattttgtgatttttggtac
aaagatgCAAAAAGCTATTACCAAAGGGGCCATTTGTTTCTTACCTCAAA
ACTTCCACTTTTTGCCATCTTTTCCCCAAATGCCACCATCGTGTGAAACA
AATGGAAACCGTGTTAAAAATGGcaaaagtctaccattttgcgAACTCTT
AGTTACGTCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGCTTGGCAAACT
TCCACTTTTGACACAAAGAACACAAATGACCAATGTAAATTAAGGTGGTA
aaaatgtaagtattttttaacacttttgaacacatttttatgaaacaaat
gggaaaaaggtggcataagtggcataaatggtgatgaaacaaatggacgc
ccgattttcgaaaaaaaaaatttggggccTAAGAAATGCCCTATATTAtg
gttttctggactttgtgaaaaatatgttctatagtttttcctaatttttt
atacaaagacGTAAAATTAAATTGTgctaaatatgaaaaagttcattttt
cgaaaaaaaaattttaggcaccaacttgcaaaattttaaatttttcgttt
tataaacaggtaggtccataaaagtatcgcttgttatGGAGAAATCGATA
ATGTTGCTTGAATAATCTGTATTTGTATATCCATAATTATAGGAACTCGG
GTAATTCGAATCCCATACAGAGTACTGATTTTGCGACTTGACAGCAGATA
TGGCAAAGAAATTGGCTTTTGAATTTGCACTcctaaaataaaattgttga
taTTAACAGAGTGTATTTCCCCAACTTCAACCATTTTGGGGAGAGAGAAC
TATGTCACTGACAAAGATTCCTAGTTTTATCAAAATTCTCTGCTTTTATA
GAAACACATCATGTCATGCGACTATGAAGAAATACTTTGCACTCTCAcat
gtggtaaaaaactgatgagGAAAGAGGTAATAGTAATAATGATCTTGCAT
GATACACTTATCGGATTAACGATTCGGCGGTTTTAAAAATTATGGGAATG
AGCCAAAGATCATTTAAAAcaggtcggtactaaaatcttgGACATACATA
TGAGTACTAagggtttttgagatttttttacaAATCATCACCCCATTTAg
agaagtggtattttagtacccatGTACTAATTTTTTTGGGGACAGTTTGA
CACAGACCGCCCAATTTTGCTCTTCTCAGGATAAATTCTGTCTTTTTGGG
ACcatttttcttaaaagtgttgatttttgcaacataattttcattttgca
aaGATTGATGCTTTTAAACAATGCTTAACCATCAAGCAAAGATTAAAGAC
AAAAATGATTAAACTCTGGAAACtttcttaaaatacaaaaaataaatctt
ttgttgaaaaattatgagaaaattttggaaaatcaaaaaaaagttttgaa
aaagattaaacaaatgatgaaaatcacTAATTTTGGTACAAATGTACTAa
acaatttcttaaattttaggcTAATTTTTAgtagattttaaagttttttt
tgggtataccaccacgtcactaaacatCATGATTTCCAAGATTTTAGTAC
TGACTGGTTTAAATTTGCCTTAAAATGTTAATTTTCCTATAAAAATGGCA
AATTTACAGGGTATTTTATgctgaaaatcttgattttgtgGATTTAGTTT
CTTTGTTTCTGACTTGTTCAAAGAAAGCTGTACGGATATAATAATTAAAT
TGGTATTGAAAACgataaaaacacttttgattcgatatttttttgtgttt
ttgtttcaGATGGAAGACCATGTGAAGAACATTTGTAAGGAGCGTCTGAA
AGATTGCCAATTCAAAAATATCGGATGTACTTTTAAGGTATGATTTTCCA
TACAAGCGTATGTTTGGTTGTgagcaaaacaaaagaatcacgCAGAAACc
atctctttttgtttttttttgtcttaaaatctctttttgtTTTGCCAACA
TAATCTCCATTtgtaaaaatagtaaaaatgaCTTCTTTATTGGACGTATG
GTGTGTGTTTATTCAAGTATGGCGGATTTTGAAATGATGCTGAGGGGGTT
AATcgaaagaatcctgcattactaaaaatagacaaaaagaacgacaaatt
tcataaaaaagaacaattttcgcCGTCCAcgaccccgaccgaaagtgact
gtaagTGTAACACCCCTAGTacgtattcattcctctttgattATCACGGG
ANgacaaattacgcatgcgtgttacaatgcaggattctttagtgAAACAG
ACTGATAATTAGACTAAATTTGGCGTTTTCAAGGTCATTTTCAACTGGTG
TTTTGCTTTTTCGTTAAAACACATTCagaaaatttcacaatttttttgtc
tcgCAAAGTTAAGTAATAAGTTGAAGTATTTTTTGACTGTACATTAAGTA
TATTATGAGAAAtatgattgaaattttttgtgtgttCTCTATACTTCAGG
GAAACCCATCATCACTGAAAGATCATGCCCTTCAAGCTACCAACAAACAC
TTGACACTTGCTATTCAATCACGTgatcaaatttcagccaatcaggAAAA
GAAGATTGATGTATTGCAAAGAGAACTCGAAACAtctaaaaaacaaataa
aagaattgaaatgtAGCAACAATGAGAAATTAAAAACGTTGCAAAATGAC
CTTTATAACCAAATCAAATTGATGGATGAGGGAACTATGTCAGATATTGG
CGTTCTGCATGCTGTCAACAAACACTTGTCACTCTCAATTCAATCACGTG
ATTTAACttcagccaatcaaaataagaagaTTGAGTCATTGCAACAAGAA
CTCAAAGCCGTAAAAAAATCAAACCGAGACTTGGAAACAAAGATGACGGA
ATCGAAATTTATCaatgaaaatcaattaaaaaagtttaataatGACAATA
AACTGGGTTTCATGGTGGAAGACTTAAACGCAAAAACAGATAAATTAGAA
GATGGAATGGATACTAATTCACAGCGCTCTCAATTTGAGATTAAGATTAT
AAAGAAGCTGatgaaaactcaaaataattctgTTGATTCATTAGAAGAGC
GAATGGAACAACAGGAAAAAACATCGAGACATCTTTCTGGAAAGTTAGAT
CGTGACAAACAGGAGTTTGCAAGAGAACAAGAACGTATCAATACAGAGTT
AAGATGGAAACAAAAGGAGATAAATCAATTACGTGATGAGCTAACCAGCT
CTAGAATGTTTATAAAATTGAATgcactttttgtttttctgttatTCTGT
TTCATTGTTTGGGTTTACAAGGAATCACTAGATGCTGTTAATGTGTACAA
CCAATCTGTTTCACAGAGCAAGAATCAAATCCTTCAATATATAGATAATT
TATTGTCGGATCGGAGTAAATTGCCAGAGCCTAAAGACTCTAAGAACCCT
AAAGACTCTAAGAACCCTAAAGACTTGTTTGACCAGAGATTTGGAGCATT
TTTTGCTCTCATCGTCATGTTGTTCTTCGCTATCATATCAGTGCTCTTTG
CTATCATATTAGCACCATTCTACCTGCTTTTTTTGGCATTAATGGAATTA
AAAAAGTACATTATGGAATATGTTTATCAGTAGCAGAACGAAACCCAAAT
TAAAGGATTTAAATTAACTGTTGCACAACCCGTAGACCACGATTCGTGAG
TTGTTTGCTGTTTGTTGACTCCAATTTTGTTGTGGTTTGCGATGATTGAA
CAATTATTTTACATCGGTTTATTTCAAATaccaattaaaggttttgtttt
tacataagtgttcccgtttcatatcagacacatctttcatatcaggacag
tgtcttcctattgttatattatgctgatataagcaaaaaactgcttttct
tttcctctttctgaccaatcttgctccacatctgtgtcaatccaatgtga
aaaagcttg

Coding sequence (CDS) from alignment at sc0000086:5233..18191+

>TCONS_00008525 ID=TCONS_00008525|Name=TCONS_00008525|organism=Clytia hemisphaerica|type=CDS|length=10044bp|location=Sequence derived from alignment at sc0000086:5233..18191+ (Clytia hemisphaerica)
ATGGCATCAAGAAGCAACAGAAGAGGAATcaacaagaaaaagaattttgt
gaaaaatccaATTCATTCTGAAGGATATGACGTGGAAATCATTGACACAA
AACTTGACAGTGAAAGTCAGATATGCATCATATGTAATTTGTTGATGAGG
AATCCAGTGCAAGGAATCCCTTTGGTGGAAGATGGTGAATCTTGTGGACA
TCGCTTTTGTAAAGCTTGCTTGGAAAGATGGCATAAAGAATGCAAATACC
CTGAATGTCCAACTTGTCGACAACTAATTAAGGCGTTCCCAGATGCAGCT
GTTGAGCGGAAAATACTTGATCTGAAAATCAAATGCACCAATTATATAAA
aggttgcaagcaaaatatggAACTCCGTGACTTGGAGAAACACATCATGT
CATGCGACTATGAAGAAATACTTTGCACTCTCAcatgtggtaaaaaactg
atgagGAAAGAGATGGAAGACCATGTGAAGAACATTTGTAAGGAGCGTCT
GAAAGATTGCCAATTCAAAAATATCGGATGTACTTTTAAGGGAAACCCAT
CATCACTGAAAGATCATGCCCTTCAAGCTACCAACAAACACTTGACACTT
GCTATTCAATCACGTgatcaaatttcagccaatcaggAAAAGAAGATTGA
TGTATTGCAAAGAGAACTCGAAACAtctaaaaaacaaataaaagaattga
aatgtAGCAACAATGAGAAATTAAAAACGTTGCAAAATGACCTTTATAAC
CAAATCAAATTGATGGATGAGGGAACTATGTCAGATATTGGCGTTCTGCA
TGCTGTCAACAAACACTTGTCACTCTCAATTCAATCACGTGATTTAACtt
cagccaatcaaaataagaagaTTGAGTCATTGCAACAAGAACTCAAAGCC
GTAAAAAAATCAAACCGAGACTTGGAAACAAAGATGACGGAATCGAAATT
TATCaatgaaaatcaattaaaaaagtttaataatGACAATAAACTGGGTT
TCATGGTGGAAGACTTAAACGCAAAAACAGATAAATTAGAAGATGGAATG
GATACTAATTCACAGCGCTCTCAATTTGAGATTAAGATTATAAAGAAGCT
GatgaaaactcaaaataattctgTTGATTCATTAGAAGAGCGAATGGAAC
AACAGGAAAAAACATCGAGACATCTTTCTGGAAAGTTAGATCGTGACAAA
CAGGAGTTTGCAAGAGAACAAGAACGTATCAATACAGAGTTAAGATGGAA
ACAAAAGGAGATAAATCAATTACGTGATGAGCTAACCAGCTCTAGAATGT
TTATAAAATTGAATgcactttttgtttttctgttatTCTGTTTCATTGTT
TGGGTTTACAAGGAATCACTAGATGCTGTTAATGTGTACAACCAATCTGT
TTCACAGAGCAAGAATCAAATCCTTCAATATATAGATAATTTATTGTCGG
ATCGGAGTAAATTGCCAGAGCCTAAAGACTCTAAGAACCCTAAAGACTCT
AAGAACCCTAAAGACTTGTTTGACCAGAGATTTGGAGCATTTTTTGCTCT
CATCGTCATGTTGTTCTTCGCTATCATATCAGTGCTCTTTGCTATCATAT
TAGCACCATTCTACCTGCTTTTTTTGGCATTAATGGAATTAAAAAAGTAC
ATTATGGAATATGTTTATCAGTAGATGGCATCAAGAAGCAACAGAAGAGG
AATcaacaagaaaaagaattttgtgaaaaatccaATTCATTCTGAAGGAT
ATGACGTGGAAATCATTGACACAAAACTTGACAGTGAAAGTCAGATATGC
ATCATATGTAATTTGTTGATGAGGAATCCAGTGCAAGGAATCCCTTTGGT
GGAAGATGGTGAATCTTGTGGACATCGCTTTTGTAAAGCTTGCTTGGAAA
GATGGCATAAAGAATGCAAATACCCTGAATGTCCAACTTGTCGACAACTA
ATTAAGGCGTTCCCAGATGCAGCTGTTGAGCGGAAAATACTTGATCTGAA
AATCAAATGCACCAATTATATAAAaggttgcaagcaaaatatggAACTCC
GTGACTTGGAGAAACACATCATGTCATGCGACTATGAAGAAATACTTTGC
ACTCTCAcatgtggtaaaaaactgatgagGAAAGAGATGGAAGACCATGT
GAAGAACATTTGTAAGGAGCGTCTGAAAGATTGCCAATTCAAAAATATCG
GATGTACTTTTAAGGGAAACCCATCATCACTGAAAGATCATGCCCTTCAA
GCTACCAACAAACACTTGACACTTGCTATTCAATCACGTgatcaaatttc
agccaatcaggAAAAGAAGATTGATGTATTGCAAAGAGAACTCGAAACAt
ctaaaaaacaaataaaagaattgaaatgtAGCAACAATGAGAAATTAAAA
ACGTTGCAAAATGACCTTTATAACCAAATCAAATTGATGGATGAGGGAAC
TATGTCAGATATTGGCGTTCTGCATGCTGTCAACAAACACTTGTCACTCT
CAATTCAATCACGTGATTTAACttcagccaatcaaaataagaagaTTGAG
TCATTGCAACAAGAACTCAAAGCCGTAAAAAAATCAAACCGAGACTTGGA
AACAAAGATGACGGAATCGAAATTTATCaatgaaaatcaattaaaaaagt
ttaataatGACAATAAACTGGGTTTCATGGTGGAAGACTTAAACGCAAAA
ACAGATAAATTAGAAGATGGAATGGATACTAATTCACAGCGCTCTCAATT
TGAGATTAAGATTATAAAGAAGCTGatgaaaactcaaaataattctgTTG
ATTCATTAGAAGAGCGAATGGAACAACAGGAAAAAACATCGAGACATCTT
TCTGGAAAGTTAGATCGTGACAAACAGGAGTTTGCAAGAGAACAAGAACG
TATCAATACAGAGTTAAGATGGAAACAAAAGGAGATAAATCAATTACGTG
ATGAGCTAACCAGCTCTAGAATGTTTATAAAATTGAATgcactttttgtt
tttctgttatTCTGTTTCATTGTTTGGGTTTACAAGGAATCACTAGATGC
TGTTAATGTGTACAACCAATCTGTTTCACAGAGCAAGAATCAAATCCTTC
AATATATAGATAATTTATTGTCGGATCGGAGTAAATTGCCAGAGCCTAAA
GACTCTAAGAACCCTAAAGACTCTAAGAACCCTAAAGACTTGTTTGACCA
GAGATTTGGAGCATTTTTTGCTCTCATCGTCATGTTGTTCTTCGCTATCA
TATCAGTGCTCTTTGCTATCATATTAGCACCATTCTACCTGCTTTTTTTG
GCATTAATGGAATTAAAAAAGTACATTATGGAATATGTTTATCAGTAGAT
GGCATCAAGAAGCAACAGAAGAGGAATcaacaagaaaaagaattttgtga
aaaatccaATTCATTCTGAAGGATATGACGTGGAAATCATTGACACAAAA
CTTGACAGTGAAAGTCAGATATGCATCATATGTAATTTGTTGATGAGGAA
TCCAGTGCAAGGAATCCCTTTGGTGGAAGATGGTGAATCTTGTGGACATC
GCTTTTGTAAAGCTTGCTTGGAAAGATGGCATAAAGAATGCAAATACCCT
GAATGTCCAACTTGTCGACAACTAATTAAGGCGTTCCCAGATGCAGCTGT
TGAGCGGAAAATACTTGATCTGAAAATCAAATGCACCAATTATATAAAag
gttgcaagcaaaatatggAACTCCGTGACTTGGAGAAACACATCATGTCA
TGCGACTATGAAGAAATACTTTGCACTCTCAcatgtggtaaaaaactgat
gagGAAAGAGATGGAAGACCATGTGAAGAACATTTGTAAGGAGCGTCTGA
AAGATTGCCAATTCAAAAATATCGGATGTACTTTTAAGGGAAACCCATCA
TCACTGAAAGATCATGCCCTTCAAGCTACCAACAAACACTTGACACTTGC
TATTCAATCACGTgatcaaatttcagccaatcaggAAAAGAAGATTGATG
TATTGCAAAGAGAACTCGAAACAtctaaaaaacaaataaaagaattgaaa
tgtAGCAACAATGAGAAATTAAAAACGTTGCAAAATGACCTTTATAACCA
AATCAAATTGATGGATGAGGGAACTATGTCAGATATTGGCGTTCTGCATG
CTGTCAACAAACACTTGTCACTCTCAATTCAATCACGTGATTTAACttca
gccaatcaaaataagaagaTTGAGTCATTGCAACAAGAACTCAAAGCCGT
AAAAAAATCAAACCGAGACTTGGAAACAAAGATGACGGAATCGAAATTTA
TCaatgaaaatcaattaaaaaagtttaataatGACAATAAACTGGGTTTC
ATGGTGGAAGACTTAAACGCAAAAACAGATAAATTAGAAGATGGAATGGA
TACTAATTCACAGCGCTCTCAATTTGAGATTAAGATTATAAAGAAGCTGa
tgaaaactcaaaataattctgTTGATTCATTAGAAGAGCGAATGGAACAA
CAGGAAAAAACATCGAGACATCTTTCTGGAAAGTTAGATCGTGACAAACA
GGAGTTTGCAAGAGAACAAGAACGTATCAATACAGAGTTAAGATGGAAAC
AAAAGGAGATAAATCAATTACGTGATGAGCTAACCAGCTCTAGAATGTTT
ATAAAATTGAATgcactttttgtttttctgttatTCTGTTTCATTGTTTG
GGTTTACAAGGAATCACTAGATGCTGTTAATGTGTACAACCAATCTGTTT
CACAGAGCAAGAATCAAATCCTTCAATATATAGATAATTTATTGTCGGAT
CGGAGTAAATTGCCAGAGCCTAAAGACTCTAAGAACCCTAAAGACTCTAA
GAACCCTAAAGACTTGTTTGACCAGAGATTTGGAGCATTTTTTGCTCTCA
TCGTCATGTTGTTCTTCGCTATCATATCAGTGCTCTTTGCTATCATATTA
GCACCATTCTACCTGCTTTTTTTGGCATTAATGGAATTAAAAAAGTACAT
TATGGAATATGTTTATCAGTAGATGGCATCAAGAAGCAACAGAAGAGGAA
TcaacaagaaaaagaattttgtgaaaaatccaATTCATTCTGAAGGATAT
GACGTGGAAATCATTGACACAAAACTTGACAGTGAAAGTCAGATATGCAT
CATATGTAATTTGTTGATGAGGAATCCAGTGCAAGGAATCCCTTTGGTGG
AAGATGGTGAATCTTGTGGACATCGCTTTTGTAAAGCTTGCTTGGAAAGA
TGGCATAAAGAATGCAAATACCCTGAATGTCCAACTTGTCGACAACTAAT
TAAGGCGTTCCCAGATGCAGCTGTTGAGCGGAAAATACTTGATCTGAAAA
TCAAATGCACCAATTATATAAAaggttgcaagcaaaatatggAACTCCGT
GACTTGGAGAAACACATCATGTCATGCGACTATGAAGAAATACTTTGCAC
TCTCAcatgtggtaaaaaactgatgagGAAAGAGATGGAAGACCATGTGA
AGAACATTTGTAAGGAGCGTCTGAAAGATTGCCAATTCAAAAATATCGGA
TGTACTTTTAAGGGAAACCCATCATCACTGAAAGATCATGCCCTTCAAGC
TACCAACAAACACTTGACACTTGCTATTCAATCACGTgatcaaatttcag
ccaatcaggAAAAGAAGATTGATGTATTGCAAAGAGAACTCGAAACAtct
aaaaaacaaataaaagaattgaaatgtAGCAACAATGAGAAATTAAAAAC
GTTGCAAAATGACCTTTATAACCAAATCAAATTGATGGATGAGGGAACTA
TGTCAGATATTGGCGTTCTGCATGCTGTCAACAAACACTTGTCACTCTCA
ATTCAATCACGTGATTTAACttcagccaatcaaaataagaagaTTGAGTC
ATTGCAACAAGAACTCAAAGCCGTAAAAAAATCAAACCGAGACTTGGAAA
CAAAGATGACGGAATCGAAATTTATCaatgaaaatcaattaaaaaagttt
aataatGACAATAAACTGGGTTTCATGGTGGAAGACTTAAACGCAAAAAC
AGATAAATTAGAAGATGGAATGGATACTAATTCACAGCGCTCTCAATTTG
AGATTAAGATTATAAAGAAGCTGatgaaaactcaaaataattctgTTGAT
TCATTAGAAGAGCGAATGGAACAACAGGAAAAAACATCGAGACATCTTTC
TGGAAAGTTAGATCGTGACAAACAGGAGTTTGCAAGAGAACAAGAACGTA
TCAATACAGAGTTAAGATGGAAACAAAAGGAGATAAATCAATTACGTGAT
GAGCTAACCAGCTCTAGAATGTTTATAAAATTGAATgcactttttgtttt
tctgttatTCTGTTTCATTGTTTGGGTTTACAAGGAATCACTAGATGCTG
TTAATGTGTACAACCAATCTGTTTCACAGAGCAAGAATCAAATCCTTCAA
TATATAGATAATTTATTGTCGGATCGGAGTAAATTGCCAGAGCCTAAAGA
CTCTAAGAACCCTAAAGACTCTAAGAACCCTAAAGACTTGTTTGACCAGA
GATTTGGAGCATTTTTTGCTCTCATCGTCATGTTGTTCTTCGCTATCATA
TCAGTGCTCTTTGCTATCATATTAGCACCATTCTACCTGCTTTTTTTGGC
ATTAATGGAATTAAAAAAGTACATTATGGAATATGTTTATCAGTAGATGG
CATCAAGAAGCAACAGAAGAGGAATcaacaagaaaaagaattttgtgaaa
aatccaATTCATTCTGAAGGATATGACGTGGAAATCATTGACACAAAACT
TGACAGTGAAAGTCAGATATGCATCATATGTAATTTGTTGATGAGGAATC
CAGTGCAAGGAATCCCTTTGGTGGAAGATGGTGAATCTTGTGGACATCGC
TTTTGTAAAGCTTGCTTGGAAAGATGGCATAAAGAATGCAAATACCCTGA
ATGTCCAACTTGTCGACAACTAATTAAGGCGTTCCCAGATGCAGCTGTTG
AGCGGAAAATACTTGATCTGAAAATCAAATGCACCAATTATATAAAaggt
tgcaagcaaaatatggAACTCCGTGACTTGGAGAAACACATCATGTCATG
CGACTATGAAGAAATACTTTGCACTCTCAcatgtggtaaaaaactgatga
gGAAAGAGATGGAAGACCATGTGAAGAACATTTGTAAGGAGCGTCTGAAA
GATTGCCAATTCAAAAATATCGGATGTACTTTTAAGGGAAACCCATCATC
ACTGAAAGATCATGCCCTTCAAGCTACCAACAAACACTTGACACTTGCTA
TTCAATCACGTgatcaaatttcagccaatcaggAAAAGAAGATTGATGTA
TTGCAAAGAGAACTCGAAACAtctaaaaaacaaataaaagaattgaaatg
tAGCAACAATGAGAAATTAAAAACGTTGCAAAATGACCTTTATAACCAAA
TCAAATTGATGGATGAGGGAACTATGTCAGATATTGGCGTTCTGCATGCT
GTCAACAAACACTTGTCACTCTCAATTCAATCACGTGATTTAACttcagc
caatcaaaataagaagaTTGAGTCATTGCAACAAGAACTCAAAGCCGTAA
AAAAATCAAACCGAGACTTGGAAACAAAGATGACGGAATCGAAATTTATC
aatgaaaatcaattaaaaaagtttaataatGACAATAAACTGGGTTTCAT
GGTGGAAGACTTAAACGCAAAAACAGATAAATTAGAAGATGGAATGGATA
CTAATTCACAGCGCTCTCAATTTGAGATTAAGATTATAAAGAAGCTGatg
aaaactcaaaataattctgTTGATTCATTAGAAGAGCGAATGGAACAACA
GGAAAAAACATCGAGACATCTTTCTGGAAAGTTAGATCGTGACAAACAGG
AGTTTGCAAGAGAACAAGAACGTATCAATACAGAGTTAAGATGGAAACAA
AAGGAGATAAATCAATTACGTGATGAGCTAACCAGCTCTAGAATGTTTAT
AAAATTGAATgcactttttgtttttctgttatTCTGTTTCATTGTTTGGG
TTTACAAGGAATCACTAGATGCTGTTAATGTGTACAACCAATCTGTTTCA
CAGAGCAAGAATCAAATCCTTCAATATATAGATAATTTATTGTCGGATCG
GAGTAAATTGCCAGAGCCTAAAGACTCTAAGAACCCTAAAGACTCTAAGA
ACCCTAAAGACTTGTTTGACCAGAGATTTGGAGCATTTTTTGCTCTCATC
GTCATGTTGTTCTTCGCTATCATATCAGTGCTCTTTGCTATCATATTAGC
ACCATTCTACCTGCTTTTTTTGGCATTAATGGAATTAAAAAAGTACATTA
TGGAATATGTTTATCAGTAGATGGCATCAAGAAGCAACAGAAGAGGAATc
aacaagaaaaagaattttgtgaaaaatccaATTCATTCTGAAGGATATGA
CGTGGAAATCATTGACACAAAACTTGACAGTGAAAGTCAGATATGCATCA
TATGTAATTTGTTGATGAGGAATCCAGTGCAAGGAATCCCTTTGGTGGAA
GATGGTGAATCTTGTGGACATCGCTTTTGTAAAGCTTGCTTGGAAAGATG
GCATAAAGAATGCAAATACCCTGAATGTCCAACTTGTCGACAACTAATTA
AGGCGTTCCCAGATGCAGCTGTTGAGCGGAAAATACTTGATCTGAAAATC
AAATGCACCAATTATATAAAaggttgcaagcaaaatatggAACTCCGTGA
CTTGGAGAAACACATCATGTCATGCGACTATGAAGAAATACTTTGCACTC
TCAcatgtggtaaaaaactgatgagGAAAGAGATGGAAGACCATGTGAAG
AACATTTGTAAGGAGCGTCTGAAAGATTGCCAATTCAAAAATATCGGATG
TACTTTTAAGGGAAACCCATCATCACTGAAAGATCATGCCCTTCAAGCTA
CCAACAAACACTTGACACTTGCTATTCAATCACGTgatcaaatttcagcc
aatcaggAAAAGAAGATTGATGTATTGCAAAGAGAACTCGAAACAtctaa
aaaacaaataaaagaattgaaatgtAGCAACAATGAGAAATTAAAAACGT
TGCAAAATGACCTTTATAACCAAATCAAATTGATGGATGAGGGAACTATG
TCAGATATTGGCGTTCTGCATGCTGTCAACAAACACTTGTCACTCTCAAT
TCAATCACGTGATTTAACttcagccaatcaaaataagaagaTTGAGTCAT
TGCAACAAGAACTCAAAGCCGTAAAAAAATCAAACCGAGACTTGGAAACA
AAGATGACGGAATCGAAATTTATCaatgaaaatcaattaaaaaagtttaa
taatGACAATAAACTGGGTTTCATGGTGGAAGACTTAAACGCAAAAACAG
ATAAATTAGAAGATGGAATGGATACTAATTCACAGCGCTCTCAATTTGAG
ATTAAGATTATAAAGAAGCTGatgaaaactcaaaataattctgTTGATTC
ATTAGAAGAGCGAATGGAACAACAGGAAAAAACATCGAGACATCTTTCTG
GAAAGTTAGATCGTGACAAACAGGAGTTTGCAAGAGAACAAGAACGTATC
AATACAGAGTTAAGATGGAAACAAAAGGAGATAAATCAATTACGTGATGA
GCTAACCAGCTCTAGAATGTTTATAAAATTGAATgcactttttgtttttc
tgttatTCTGTTTCATTGTTTGGGTTTACAAGGAATCACTAGATGCTGTT
AATGTGTACAACCAATCTGTTTCACAGAGCAAGAATCAAATCCTTCAATA
TATAGATAATTTATTGTCGGATCGGAGTAAATTGCCAGAGCCTAAAGACT
CTAAGAACCCTAAAGACTCTAAGAACCCTAAAGACTTGTTTGACCAGAGA
TTTGGAGCATTTTTTGCTCTCATCGTCATGTTGTTCTTCGCTATCATATC
AGTGCTCTTTGCTATCATATTAGCACCATTCTACCTGCTTTTTTTGGCAT
TAATGGAATTAAAAAAGTACATTATGGAATATGTTTATCAGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004774XLOC_004774Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008525-proteinTCONS_00008525-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008525-exon-sc0000086-1491911889:5233..5778TCONS_00008525-exon-sc0000086-1491911889:5233..5778Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1510915933:5233..5778TCONS_00008525-exon-sc0000086-1510915933:5233..5778Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1575043694:5233..5778TCONS_00008525-exon-sc0000086-1575043694:5233..5778Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1491911889:12268..12304TCONS_00008525-exon-sc0000086-1491911889:12268..12304Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1510915933:12268..12304TCONS_00008525-exon-sc0000086-1510915933:12268..12304Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1575043694:12268..12304TCONS_00008525-exon-sc0000086-1575043694:12268..12304Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1491911889:13594..13698TCONS_00008525-exon-sc0000086-1491911889:13594..13698Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1510915933:13594..13698TCONS_00008525-exon-sc0000086-1510915933:13594..13698Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1575043694:13594..13698TCONS_00008525-exon-sc0000086-1575043694:13594..13698Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1491911889:15134..15208TCONS_00008525-exon-sc0000086-1491911889:15134..15208Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1510915933:15134..15208TCONS_00008525-exon-sc0000086-1510915933:15134..15208Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1575043694:15134..15208TCONS_00008525-exon-sc0000086-1575043694:15134..15208Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1491911889:16042..16119TCONS_00008525-exon-sc0000086-1491911889:16042..16119Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1510915933:16042..16119TCONS_00008525-exon-sc0000086-1510915933:16042..16119Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1575043694:16042..16119TCONS_00008525-exon-sc0000086-1575043694:16042..16119Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1491911889:16732..18191TCONS_00008525-exon-sc0000086-1491911889:16732..18191Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1510915933:16732..18191TCONS_00008525-exon-sc0000086-1510915933:16732..18191Clytia hemisphaericaexon
TCONS_00008525-exon-sc0000086-1575043694:16732..18191TCONS_00008525-exon-sc0000086-1575043694:16732..18191Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:5233..18191 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.413581	0.652417	0	0	3.6002	3.67072	2.58785	4.8416	4.82378	3.09971	5.40357	3.85476	4.93651	3.77256	1.96689	2.87238	2.95335	2.05806	3.13332	4.72373	4.20079	5.65853	0.655523	1.522	3.35698	4.80771	6.86048	4.22476	3.76779	3.74972
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR001293Znf_TRAF
IPR017907Znf_RING_CS
IPR001841Znf_RING
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Blast
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BLAST of TCONS_00008525 vs. Swiss-Prot (Human)
Match: TRAF4 (TNF receptor-associated factor 4 OS=Homo sapiens GN=TRAF4 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.720e-18
Identity = 52/161 (32.30%), Postives = 84/161 (52.17%), Query Frame = 2 
Query:  374 GYDVEIIDTKLDSESQICIICNLLMRNPVQGIPLVEDGESCGHRFCKACLERWHKECKYPECPTCRQL----IKAFPDAAVERKILDLKIKCTNYIKGCKQNMELRDLEKHIMSCDYEEILCTLTCGKKLMRKEMEDHVKNICKERLKDCQFKNIGCTFKG 844
            G+D + ++        +C +C   MR PVQ         +CGHRFC  CL+ +  E  + +CP   QL     K +PD  +E ++L L I+C +  +GC+ +  LR L+ H+ +C +  I C   C  KL R+++  H+++ C +R   C+F   GC F G
Sbjct:    3 GFDYKFLEKP--KRRLLCPLCGKPMREPVQV-------STCGHRFCDTCLQEFLSEGVF-KCPE-DQLPLDYAKIYPDPELEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CGCDFSG 150
The following BLAST results are available for this feature:
BLAST of TCONS_00008525 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF44.720e-1832.30TNF receptor-associated factor 4 OS=Homo sapiens G... [more]
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