TCONS_00008475 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008475
Unique NameTCONS_00008475
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1530

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008475 ID=TCONS_00008475|Name=TCONS_00008475|organism=Clytia hemisphaerica|type=transcript|length=1530bp
ttaggttgaaataaagaaaatgctgaTTCATGGAATTTATATTGTGGCCG
TTTTTACTTTGACTCTTGGGCTAGATATCAAGTTAAATGAAAGTCCTGAT
GGTTCGACGCTCGATGAAGAGTGTGGCATCTACAGTGCAGTGGTGCATAA
AAACGAGAACAGTGACAATgataaaacaatcaaaatcatgACTGGTTCTG
ACCGTCACCAACCAGTGTGGAGGCACAGGAAATGGCCTTGGATGGCATTG
ATCAAGAACACCACAAGTGCATTATGTAATGGTGTCCTTATTAAGAAGAA
CTATATATTGACTACAGCTTCATGTGTGGACGATGAGGAGCAGGACGATC
TGGTGGTCGATTTGCATGGACAAAAATATGAGATCGAAAAGATAATGACA
CATGAAGGTTACAAAGATGATCGACCCTTGAAATTGACTGGTGACCTTAG
TTTGATCAAGCTGAAAGAGCACGCACCCACAGCAAAAGATAAAACAAAAG
CCATGTCAATTTGTCTACCAAGATCAAAGAAACAACCTTTATATGCTCAA
GAATGTGCTGTTAGTTTCCTTTGGACCAGAGACAAAGAGAGAAAAGAAGT
AGATACATCAGCTGGTTGGTTTGATATTGAGGATTGTATGAGAATCCCAA
AGAAGGATGAGTTTGGGAATGAAAGTCTCCTACAGTGTATTCAAACAGCC
CAAGATCTCAAACCAAAAGGATCAACGTCACAAGTGGTGTATTTCTTCAG
TTGCAAAATGTCTGGTTACTGGTCAGTGTTTGGTTTCAGTAAAAACCAGA
AACATGTGACCAGGAGGGGTAAAAAGACTTTCTCGTTTTTTTTAACGTTG
ACAAGATATTTGGCATGGATTAAGAAACATTTGTATAATATGGACGAAAG
CAAAATACCTGATCTGGATGAATAAAAACGTGTGTAGTAGATTTTTTCAA
ATGGGACTTAATACAAAATTTAAtctgaaaatacaaagaaatgtATACAA
CTTACTGTTGCAGATCTTTTTCAATCGATTTTGAATCCAATGTTAATTTG
GCTATTGCTCTTTTTAACCTGGTGAAATAATAAATGAATATTACTAGAAG
ATAATTATATTCCTTCTTTCTGTAAAAACAAAGGATTGGTTCTGGATGAG
TTTAGCTAGGTTCTTTATCAAAGAGGAAAAAGATTTCTACCGCAATCAAA
AGGCcgtttaaaaaacttttaaatgtaTCCAATGtattctgacattacat
cacggacaaccaatcagctgttgggtccgtggagtacattgcaatggtgc
atattgtGAATATAAATCACATGGATACCATGAACTAAGGATTATAATAG
TAAAAACTTGAGCGACATGAAAAAAGGAATTCATACTTGACtgtttcaaa
atcaaaagatgTAACTGGATCAACTTTAGACTGTGACTTTTGCTTGAACT
TCACAATCTGGAATAAGATAAAGTGTTGCAGATTTTATAATcaagattca
aaataaaaaaaattgtttgtatGGTTTATG
Run BLAST on NCBI

protein sequence of TCONS_00008475-protein

>TCONS_00008475-protein ID=TCONS_00008475-protein|Name=TCONS_00008475-protein|organism=Clytia hemisphaerica|type=polypeptide|length=301bp
MLIHGIYIVAVFTLTLGLDIKLNESPDGSTLDEECGIYSAVVHKNENSDN
DKTIKIMTGSDRHQPVWRHRKWPWMALIKNTTSALCNGVLIKKNYILTTA
SCVDDEEQDDLVVDLHGQKYEIEKIMTHEGYKDDRPLKLTGDLSLIKLKE
HAPTAKDKTKAMSICLPRSKKQPLYAQECAVSFLWTRDKERKEVDTSAGW
FDIEDCMRIPKKDEFGNESLLQCIQTAQDLKPKGSTSQVVYFFSCKMSGY
WSVFGFSKNQKHVTRRGKKTFSFFLTLTRYLAWIKKHLYNMDESKIPDLD
E
Run BLAST on NCBI

transcript from alignment at sc0000085:395048..398550-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008475 ID=TCONS_00008475|Name=TCONS_00008475|organism=Clytia hemisphaerica|type=transcript|length=3503bp|location=Sequence derived from alignment at sc0000085:395048..398550- (Clytia hemisphaerica)
TTAGGTTGAAATAAAGAAAATGCTGATTCATGGAATTTATATTGTGGCCG
TTTTTACTTTGACTCTTGGTAAGATCTCGTTTCTGATTGGTCCCTAGGGA
GTGGAAGTTAAAGGGATTCTGGGAAAGCTTCTCGCTGTGGTTTTCAAAAT
AAAGTGCTTTTAAGAAAAAGAAAAATACTTTTTAATTTCGACACCCTGGA
GAGCACAACTCACAAATGAAACTGCGGGTAGAACGTCCTAAGACTTGCTA
TGTGAGGTTAGAATCACTCAAATAATAAGGTTAAAGAGTCCAGCTCAATA
AGTATTAATGCGTATTCTTATACAAGAGAAAGAAGCTTGAAGTTTTTATT
GTTTTCCGTAGGGCTAGATATCAAGTTAAATGAAAGTCCTGATGGTTCGA
CGCTCGATGAAGGTAAGGTTGTTTATCTTATTCTCAAGCTTAGAATTTAG
ATTTCAAGAACTCAAAGGAAATAACAATCATTTAACCCAAAAAACTAAAA
TATTATCGAGATGAAGAAATTCGTAATTTATGAATTATGATGGATACACT
AATCAAAACTCCTAATTTAATAACAAGCCACGGTCTTGATAAACTAAACG
TTTCTTTTCTGATAACTTGATTATAGATCATTTAAGTATAGCAATTGATG
ATTTCTGACCAGGTATTCATGGTTCCATGGATTTCCACCAAAGAGTCTGT
CAAGATTTTTCGGAGAAATATAGACAAACCAAGCTTGACAAACAAAAAGT
GCATTAAGTTTTGATTTCAATGATTCTGGCGCGGTAGCTCCACTGTTAGC
CGGTCACAACACTTCAAAGCTTATTTGATATTCATCCCAAATCTGTCAAA
TCATAAGATCATCACATTCACCGCATGGCTCAAGAGCTTGACCATAATAT
TGGCAAAATGGGTTTACATAATATTGGTTTAAAATTAATCTATTTTACAT
ATCATTTTCAGAGTATGTTATATTCAAAAAAGGTTGCGCGCCGGACAGGT
TAAGTATCCCTTCAAATAAATAATCCTATTTACATATCATTTTCAGAGTG
TGGCATCTACAGTGCAGTGGTGCATAAAAACGAGAACAGTGACAATGATA
AAACAATCAAAATCATGACTGGTTCTGACCGTCACCAACCAGTGTGGAGG
CACAGGAAATGGCCTTGGATGGCATTGATCAAGAACACCACAAGTGCATT
ATGTAATGGTGTCCTTATTAAGAAGAACTATATATTGACTACAGCTTCAT
GTGTGGGTAAGAAACACTGGTCTAATCATGATAATACACCATTTTGATGT
CATCACGAACCCAACAACTGATCGCTTGTAAGTGACTTTCAACCAATCAG
CTGTTGGGTCCGTGGAAAACATTATAATGGTGCATATCATCGTGAATAAG
GAAATCTGTAGCCTATCAATTGTGTAAAGAAGTATGATGTACCTTAAACT
AATTAGAGTTAATTAGAACCCGCGATTTACAATTTTTTTGCAAATTTTTA
TCAAAAAAATTAAAAGATCACTAAGGAAACAAAGAAGAACAACTTATATC
TATCTAAATCTTTAAAGCTTAGTACACTTGAAGCAGTCCTCATTCCGTCG
CTCATTCATATAGAATTTGATGGGTTTGGTTGGTTGAAAGGTGTATTTCA
TATAGGGAAAAATAATAAAATTTTGCTGTGCGTTTTTAGACGATGAGGAG
CAGGACGATCTGGTGGTCGATTTGCATGGACAAAAATATGAGATCGAAAA
GATAATGACACATGAAGGTTACAAAGATGATCGACCCTTGAAATTGACTG
GTGACCTTAGTAAGTCTTAAGAAATTTTCTATGCAAACGATGTCCATTGT
TAGACTTCATCAATGTAGGAGCTTATGTTTAAATGTCTGTATAGTATTTA
TTATAACTGATAAACTCGAACCCAATTCCCCTATGATGTCAGAGTTTGCT
TTACTATCTACAATCAGTGCCATAACATATTGGCACTTTTGGCTAATTTA
CCATTTTTCGAAAATTGAAGTTCGAGCGAGAATGTCAATTGCGGGCCTTC
AACTTGATTTCAACGATTATTTCGATCTGGGAGGGATTTATTGGTTTCTA
GGCTATATTTCAAGTCCTACTGGACCATTTTTGAACTTTTGGATCCTTAG
ATCCTAAGGTCCCAAGTCTTAAGTCTAGCGTTATAACTAAGAGTTAAAAC
TCTACCCTTCGAACCTACTTTAGAGCACTTGCAAACCTATTTTGGTTTCA
AAACACCCCGGTGGATTTCCTTTTTGTGACAAGTATTTCGTCACCGATTG
TAGTTGGATATTTTCAGTTGCTTTTTAAGTATTTTAGATTAATGATGAGT
AATGTTTTTTCATTCAGGTTTGATCAAGCTGAAAGAGCACGCACCCACAG
CAAAAGATAAAACAAAAGCCATGTCAATTTGTCTACCAAGATCAAAGAAA
CAACCTTTATATGCTCAAGAATGTGCTGTTAGTTTCCTTTGGACCAGAGA
CAAAGAGAGAAAAGAAGTAGATACATCAGCTGGTTGGTTTGATATTGAGG
ATTGTATGAGAATCCCAAAGAAGGATGAGTTTGGGAATGAAAGTCTCCTA
CAGTGTATTCAAACAGCCCAAGATCTCAAACCAAAAGGATCAACATCACA
AGTGGTGTATTTCTNAAACAGCCCAAGATCTCAAACCAAAAGGATCAACG
TCACAAGTGGTGTATTTCTTCAGTTGCAAAATGTCTGGTTACTGGTCAGT
GTTTGGTTTCAGTAAAAACCAGAAACATGTGACCAGGAGGGGTAAAAAGA
CTTTCTCGTTTTTTTTAACGTTGACAAGATATTTGGCATGGATTAAGAAA
CATTTGTATAATATGGACGAAAGCAAAATACCTGATCTGGATGAATAAAA
ACGTGTGTAGTAGATTTTTTCAAATGGGACTTAATACAAAATTTAATCTG
AAAATACAAAGAAATGTATACAACTTACTGTTGCAGATCTTTTTCAATCG
ATTTTGAATCCAATGTTAATTTGGCTATTGCTCTTTTTAACCTGGTGAAA
TAATAAATGAATATTACTAGAAGATAATTATATTCCTTCTTTCTGTAAAA
ACAAAGGATTGGTTCTGGATGAGTTTAGCTAGGTTCTTTATCAAAGAGGA
AAAAGATTTCTACCGCAATCAAAAGGCCGTTTAAAAAACTTTTAAATGTA
TCCAATGTATTCTGACATTACATCACGGACAACCAATCAGCTGTTGGGTC
CGTGGAGTACATTGCAATGGTGCATATTGTGAATATAAATCACATGGATA
CCATGAACTAAGGATTATAATAGTAAAAACTTGAGCGACATGAAAAAAGG
AATTCATACTTGACTGTTTCAAAATCAAAAGATGTAACTGGATCAACTTT
AGACTGTGACTTTTGCTTGAACTTCACAATCTGGAATAAGATAAAGTGTT
GCAGATTTTATAATCAAGATTCAAAATAAAAAAAATTGTTTGTATGGTTT
ATG

Coding sequence (CDS) from alignment at sc0000085:395048..398550-

>TCONS_00008475 ID=TCONS_00008475|Name=TCONS_00008475|organism=Clytia hemisphaerica|type=CDS|length=5436bp|location=Sequence derived from alignment at sc0000085:395048..398550- (Clytia hemisphaerica)
GTCACAAGTGGTGTATTTCTTCAGTTGCAAAATGTCTGGTTACTGGTCAG
TGTTTGGTTTCAGTAAAAACCAGAAACATGTGACCAGGAGGGGTAAAAAG
ACTTTCTCGTTTTTTTTAACGTTGACAAGATATTTGGCATGGATTAAGAA
ACATTTGTATAATATGGACGAAAGCAAAATACCTGATCTGGATGAATAAG
TTTGATCAAGCTGAAAGAGCACGCACCCACAGCAAAAGATAAAACAAAAG
CCATGTCAATTTGTCTACCAAGATCAAAGAAACAACCTTTATATGCTCAA
GAATGTGCTGTTAGTTTCCTTTGGACCAGAGACAAAGAGAGAAAAGAAGT
AGATACATCAGCTGGTTGGTTTGATATTGAGGATTGTATGAGAATCCCAA
AGAAGGATGAGTTTGGGAATGAAAGTCTCCTACAGTGTATTCAAACAGCC
CAAGATCTCAAACCAAAAGGATCAACACGATGAGGAGCAGGACGATCTGG
TGGTCGATTTGCATGGACAAAAATATGAGATCGAAAAGATAATGACACAT
GAAGGTTACAAAGATGATCGACCCTTGAAATTGACTGGTGACCTTAAGTG
TGGCATCTACAGTGCAGTGGTGCATAAAAACGAGAACAGTGACAATGATA
AAACAATCAAAATCATGACTGGTTCTGACCGTCACCAACCAGTGTGGAGG
CACAGGAAATGGCCTTGGATGGCATTGATCAAGAACACCACAAGTGCATT
ATGTAATGGTGTCCTTATTAAGAAGAACTATATATTGACTACAGCTTCAT
GTGTGGGGCTAGATATCAAGTTAAATGAAAGTCCTGATGGTTCGACGCTC
GATGAAGATGCTGATTCATGGAATTTATATTGTGGCCGTTTTTACTTTGA
CTCTTGGTCACAAGTGGTGTATTTCTTCAGTTGCAAAATGTCTGGTTACT
GGTCAGTGTTTGGTTTCAGTAAAAACCAGAAACATGTGACCAGGAGGGGT
AAAAAGACTTTCTCGTTTTTTTTAACGTTGACAAGATATTTGGCATGGAT
TAAGAAACATTTGTATAATATGGACGAAAGCAAAATACCTGATCTGGATG
AATAAGTTTGATCAAGCTGAAAGAGCACGCACCCACAGCAAAAGATAAAA
CAAAAGCCATGTCAATTTGTCTACCAAGATCAAAGAAACAACCTTTATAT
GCTCAAGAATGTGCTGTTAGTTTCCTTTGGACCAGAGACAAAGAGAGAAA
AGAAGTAGATACATCAGCTGGTTGGTTTGATATTGAGGATTGTATGAGAA
TCCCAAAGAAGGATGAGTTTGGGAATGAAAGTCTCCTACAGTGTATTCAA
ACAGCCCAAGATCTCAAACCAAAAGGATCAACACGATGAGGAGCAGGACG
ATCTGGTGGTCGATTTGCATGGACAAAAATATGAGATCGAAAAGATAATG
ACACATGAAGGTTACAAAGATGATCGACCCTTGAAATTGACTGGTGACCT
TAAGTGTGGCATCTACAGTGCAGTGGTGCATAAAAACGAGAACAGTGACA
ATGATAAAACAATCAAAATCATGACTGGTTCTGACCGTCACCAACCAGTG
TGGAGGCACAGGAAATGGCCTTGGATGGCATTGATCAAGAACACCACAAG
TGCATTATGTAATGGTGTCCTTATTAAGAAGAACTATATATTGACTACAG
CTTCATGTGTGGGGCTAGATATCAAGTTAAATGAAAGTCCTGATGGTTCG
ACGCTCGATGAAGATGCTGATTCATGGAATTTATATTGTGGCCGTTTTTA
CTTTGACTCTTGGTCACAAGTGGTGTATTTCTTCAGTTGCAAAATGTCTG
GTTACTGGTCAGTGTTTGGTTTCAGTAAAAACCAGAAACATGTGACCAGG
AGGGGTAAAAAGACTTTCTCGTTTTTTTTAACGTTGACAAGATATTTGGC
ATGGATTAAGAAACATTTGTATAATATGGACGAAAGCAAAATACCTGATC
TGGATGAATAAGTTTGATCAAGCTGAAAGAGCACGCACCCACAGCAAAAG
ATAAAACAAAAGCCATGTCAATTTGTCTACCAAGATCAAAGAAACAACCT
TTATATGCTCAAGAATGTGCTGTTAGTTTCCTTTGGACCAGAGACAAAGA
GAGAAAAGAAGTAGATACATCAGCTGGTTGGTTTGATATTGAGGATTGTA
TGAGAATCCCAAAGAAGGATGAGTTTGGGAATGAAAGTCTCCTACAGTGT
ATTCAAACAGCCCAAGATCTCAAACCAAAAGGATCAACACGATGAGGAGC
AGGACGATCTGGTGGTCGATTTGCATGGACAAAAATATGAGATCGAAAAG
ATAATGACACATGAAGGTTACAAAGATGATCGACCCTTGAAATTGACTGG
TGACCTTAAGTGTGGCATCTACAGTGCAGTGGTGCATAAAAACGAGAACA
GTGACAATGATAAAACAATCAAAATCATGACTGGTTCTGACCGTCACCAA
CCAGTGTGGAGGCACAGGAAATGGCCTTGGATGGCATTGATCAAGAACAC
CACAAGTGCATTATGTAATGGTGTCCTTATTAAGAAGAACTATATATTGA
CTACAGCTTCATGTGTGGGGCTAGATATCAAGTTAAATGAAAGTCCTGAT
GGTTCGACGCTCGATGAAGATGCTGATTCATGGAATTTATATTGTGGCCG
TTTTTACTTTGACTCTTGGTCACAAGTGGTGTATTTCTTCAGTTGCAAAA
TGTCTGGTTACTGGTCAGTGTTTGGTTTCAGTAAAAACCAGAAACATGTG
ACCAGGAGGGGTAAAAAGACTTTCTCGTTTTTTTTAACGTTGACAAGATA
TTTGGCATGGATTAAGAAACATTTGTATAATATGGACGAAAGCAAAATAC
CTGATCTGGATGAATAAGTTTGATCAAGCTGAAAGAGCACGCACCCACAG
CAAAAGATAAAACAAAAGCCATGTCAATTTGTCTACCAAGATCAAAGAAA
CAACCTTTATATGCTCAAGAATGTGCTGTTAGTTTCCTTTGGACCAGAGA
CAAAGAGAGAAAAGAAGTAGATACATCAGCTGGTTGGTTTGATATTGAGG
ATTGTATGAGAATCCCAAAGAAGGATGAGTTTGGGAATGAAAGTCTCCTA
CAGTGTATTCAAACAGCCCAAGATCTCAAACCAAAAGGATCAACACGATG
AGGAGCAGGACGATCTGGTGGTCGATTTGCATGGACAAAAATATGAGATC
GAAAAGATAATGACACATGAAGGTTACAAAGATGATCGACCCTTGAAATT
GACTGGTGACCTTAAGTGTGGCATCTACAGTGCAGTGGTGCATAAAAACG
AGAACAGTGACAATGATAAAACAATCAAAATCATGACTGGTTCTGACCGT
CACCAACCAGTGTGGAGGCACAGGAAATGGCCTTGGATGGCATTGATCAA
GAACACCACAAGTGCATTATGTAATGGTGTCCTTATTAAGAAGAACTATA
TATTGACTACAGCTTCATGTGTGGGGCTAGATATCAAGTTAAATGAAAGT
CCTGATGGTTCGACGCTCGATGAAGATGCTGATTCATGGAATTTATATTG
TGGCCGTTTTTACTTTGACTCTTGGTCACAAGTGGTGTATTTCTTCAGTT
GCAAAATGTCTGGTTACTGGTCAGTGTTTGGTTTCAGTAAAAACCAGAAA
CATGTGACCAGGAGGGGTAAAAAGACTTTCTCGTTTTTTTTAACGTTGAC
AAGATATTTGGCATGGATTAAGAAACATTTGTATAATATGGACGAAAGCA
AAATACCTGATCTGGATGAATAAGTTTGATCAAGCTGAAAGAGCACGCAC
CCACAGCAAAAGATAAAACAAAAGCCATGTCAATTTGTCTACCAAGATCA
AAGAAACAACCTTTATATGCTCAAGAATGTGCTGTTAGTTTCCTTTGGAC
CAGAGACAAAGAGAGAAAAGAAGTAGATACATCAGCTGGTTGGTTTGATA
TTGAGGATTGTATGAGAATCCCAAAGAAGGATGAGTTTGGGAATGAAAGT
CTCCTACAGTGTATTCAAACAGCCCAAGATCTCAAACCAAAAGGATCAAC
ACGATGAGGAGCAGGACGATCTGGTGGTCGATTTGCATGGACAAAAATAT
GAGATCGAAAAGATAATGACACATGAAGGTTACAAAGATGATCGACCCTT
GAAATTGACTGGTGACCTTAAGTGTGGCATCTACAGTGCAGTGGTGCATA
AAAACGAGAACAGTGACAATGATAAAACAATCAAAATCATGACTGGTTCT
GACCGTCACCAACCAGTGTGGAGGCACAGGAAATGGCCTTGGATGGCATT
GATCAAGAACACCACAAGTGCATTATGTAATGGTGTCCTTATTAAGAAGA
ACTATATATTGACTACAGCTTCATGTGTGGGGCTAGATATCAAGTTAAAT
GAAAGTCCTGATGGTTCGACGCTCGATGAAGATGCTGATTCATGGAATTT
ATATTGTGGCCGTTTTTACTTTGACTCTTGGTCACAAGTGGTGTATTTCT
TCAGTTGCAAAATGTCTGGTTACTGGTCAGTGTTTGGTTTCAGTAAAAAC
CAGAAACATGTGACCAGGAGGGGTAAAAAGACTTTCTCGTTTTTTTTAAC
GTTGACAAGATATTTGGCATGGATTAAGAAACATTTGTATAATATGGACG
AAAGCAAAATACCTGATCTGGATGAATAAGTTTGATCAAGCTGAAAGAGC
ACGCACCCACAGCAAAAGATAAAACAAAAGCCATGTCAATTTGTCTACCA
AGATCAAAGAAACAACCTTTATATGCTCAAGAATGTGCTGTTAGTTTCCT
TTGGACCAGAGACAAAGAGAGAAAAGAAGTAGATACATCAGCTGGTTGGT
TTGATATTGAGGATTGTATGAGAATCCCAAAGAAGGATGAGTTTGGGAAT
GAAAGTCTCCTACAGTGTATTCAAACAGCCCAAGATCTCAAACCAAAAGG
ATCAACACGATGAGGAGCAGGACGATCTGGTGGTCGATTTGCATGGACAA
AAATATGAGATCGAAAAGATAATGACACATGAAGGTTACAAAGATGATCG
ACCCTTGAAATTGACTGGTGACCTTAAGTGTGGCATCTACAGTGCAGTGG
TGCATAAAAACGAGAACAGTGACAATGATAAAACAATCAAAATCATGACT
GGTTCTGACCGTCACCAACCAGTGTGGAGGCACAGGAAATGGCCTTGGAT
GGCATTGATCAAGAACACCACAAGTGCATTATGTAATGGTGTCCTTATTA
AGAAGAACTATATATTGACTACAGCTTCATGTGTGGGGCTAGATATCAAG
TTAAATGAAAGTCCTGATGGTTCGACGCTCGATGAAGATGCTGATTCATG
GAATTTATATTGTGGCCGTTTTTACTTTGACTCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004733XLOC_004733Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008475-proteinTCONS_00008475-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008475-exon-sc0000085-1575043694:398483..398550TCONS_00008475-exon-sc0000085-1575043694:398483..398550Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1575043694:398139..398189TCONS_00008475-exon-sc0000085-1575043694:398139..398189Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1575043694:397295..397504TCONS_00008475-exon-sc0000085-1575043694:397295..397504Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1575043694:396742..396861TCONS_00008475-exon-sc0000085-1575043694:396742..396861Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1575043694:395907..396183TCONS_00008475-exon-sc0000085-1575043694:395907..396183Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1575043694:395048..395851TCONS_00008475-exon-sc0000085-1575043694:395048..395851Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1510915933:398483..398550TCONS_00008475-exon-sc0000085-1510915933:398483..398550Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1510915933:398139..398189TCONS_00008475-exon-sc0000085-1510915933:398139..398189Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1510915933:397295..397504TCONS_00008475-exon-sc0000085-1510915933:397295..397504Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1510915933:396742..396861TCONS_00008475-exon-sc0000085-1510915933:396742..396861Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1510915933:395907..396183TCONS_00008475-exon-sc0000085-1510915933:395907..396183Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1510915933:395048..395851TCONS_00008475-exon-sc0000085-1510915933:395048..395851Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1491911889:398483..398550TCONS_00008475-exon-sc0000085-1491911889:398483..398550Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1491911889:398139..398189TCONS_00008475-exon-sc0000085-1491911889:398139..398189Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1491911889:397295..397504TCONS_00008475-exon-sc0000085-1491911889:397295..397504Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1491911889:396742..396861TCONS_00008475-exon-sc0000085-1491911889:396742..396861Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1491911889:395907..396183TCONS_00008475-exon-sc0000085-1491911889:395907..396183Clytia hemisphaericaexon
TCONS_00008475-exon-sc0000085-1491911889:395048..395851TCONS_00008475-exon-sc0000085-1491911889:395048..395851Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:395048..398550 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.139644	0.0270814	0.314687	0.469324	0.985917	1.39454	22.312	21.3836	8.34317	4.39901	14.8274	15.7351	15.1639	11.291	12.5144	27.5226	15.2016	15.8966	0.0575095	0.149374	9.06917	7.63947	7.96744	6.03608	8.60167	10.0486	1.11114	0.321721	0.0925503	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001254Trypsin_dom
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008475 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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