TCONS_00008297 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008297
Unique NameTCONS_00008297
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2791

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008297 ID=TCONS_00008297|Name=TCONS_00008297|organism=Clytia hemisphaerica|type=transcript|length=2791bp
tttcatttgagttggaTTTATGATTTCTAGATTTGATATTAAAGGAGCAA
ATAAAACATTTGTTACTGGAGTaattatttttgtcaataaaaataATGAA
CAAAAAGAGAGCGAAAAAGGTCCATTTTCACTCACCACGATTTGAAGGTT
ACCAAAATTTGGGCACCTTAGAACAGGCATCGTCTATACCGAGCAATAGT
CTACCTCACTTGAGTCGAAGTGCAAGGTCACAGAAAACAAGTAAAGCTTC
ACTGTCGGTCAGTGGAAGGAACATGTTGTCATCAAGCAAAAGTATTGACG
TCTCAACCGTTGAAAATGAATACATTCGAAACCTTCAACAACAAGTTTAT
TTCTTGGAGTTAGAATGTGATTATTTACGTGGACAAGCTAACAGAGTGCA
GGAAATACCCAATGATATCACCTTAGAAGCTGGCAAACTCGTCAAACGAC
TAAAGATAGCACAAAAAGAAATTCGGGATCGCGATTCAGAGATTCTAAAG
CGTGACGACAATATCAATTTACTGCAACATGAATGCGAAAATCTTACATC
CAAGATATCGATACTTGAAGATTCATTCGCAGCAGAGAAGAAAGAACTTA
TTAACGAAGTCGTCTCGCTAAAGAAAGAACTCGAACGTAAAGAGCTCGAT
CAAGCTCGTAAAATCaatgaaaacgaaaaaatcaaacttgactACGATAC
TACGATCGTAGACTTGAAAGAATCGACAAGCAAGATCAACGTCACATTAG
CACAACTTCACGAGAAAACAGACGAATATAACAAACTTCGCGTTCTATAC
GAAGAACAGCGCGCCGAATGCTTAAAAATACAGACTGAGTACCAAGAGCT
CGAAGAACGATTCTTCAATTCCAAGGCTAAATCAATGGAAGATGTTGGAC
GCAGTCTAAAGGaagaaatgaagacattgcgTTTTGATCTTcgtgaaaaa
gaaatcaaagtggAACAAGAAAGGACACTAAGACTAAAGATGTCGGATGA
TTGTGCCGCTTTGGTGAAAGAAAATGCCACTCTGGCTTCACAATGCAGTG
AGCTACAAAAACATCTCGACATTGAACGAGATTACAAACATGACAAATCA
TTACGTAATCAAACAAATATTCAAGAACTCGTCACGTTGAAAGAAGAACG
AAAACATTTGGAAAGGGATCTGGACCGAGCCAATCAGCTGTTAGAAATCG
AAAAGAATAAATATACAAGACTCCTTGATCGATTCACGAATGAAGAAGAA
AGACATACCAGAGccaaactacacaGTTCGAAGCTGAAAGCAGAGCTTGA
AGAATTAGAAGGCTTGGAAACagttggtacaaaagaaaatATCGCCTTAC
GACGTGATAAAGTTTTAATGAGTGATGAAATCGCCTCACTGCAATCAAAG
TTGGAGGATAAGAACGATCACGTGAGAACCTTACAAAACAAATTATCCAA
TTTAAACGTCGCATATGATGAACTAGATCATAAACACAAAACAGAATTCA
ATCTCAATTCAATCCGTTGGGATGAGTTTGAAAAAATGGCGGACCAGATG
AAATCGTTCACTCGGTCCATGTCTCCTATTCGACAAAGTCTTTCCAATAC
TTCTCTGGGAAGAAGAATTCAGGAACTCGATCTAGATCAAGACACCTAAC
CTGCTGGACACTGGACTGAAGATTTGTTAGGATTGTCGGATATGACCTAT
ATCATCTCAACACTTCTTTGGTTGCTAGTTGGAGCATTATATCAAGAAAC
TTAGCTTAGCCTGGATACTAGTTGAAGGCTTGTCTGTAAGCCTGTTGACC
TTTATATCCTTCAATAATTGTTCATTTAAATctcttcaacttttttcata
tttatattattttatgaaaaactCAGGAACTGAAGCTGAATAAAGAAAGC
TAGCTTAGACTCATTAGACTAGTTTAATAGTCTTATGTGTGGTAATATGA
AATTATGTCAGACGTATGCGTGATAAATTAGGGAAAGATTTTAGGTTCCA
TAGTTCATCGGGAAATCTTTAATGTTTCGATACCTTatgtggataaattt
tcgcgtggattaattttcgcggttttcgcgaattttggccatttttgcga
aatttaatccacgcgaaatctttaaatcctcgtctcgcgaaaattagtac
acgcgaaaagttatccacttaaggtacgcTGGAGAGAAAGACTTCAaatt
aagaaaaagtttctgattgtacacctctgtgtcacagacccactgggatc
ccaggcccactggaaaatttggcaaaaatttcgtccccggtgggaaaata
cactggaatttcagccccactgggaaattgactttgatttcatccccatt
cgattCCATGCTCAAAAGTTTCACTACAAACCAATCCCACTGgatgtttc
attttttaactttggaacaatagagtttTTATacccattggaatttcaat
aggaatttttatccttactgaggaaaaaagttccaccgggcctgtgagac
aggggtgtgattgTGTAGATATTTGAATTAACGAAGAAAAATCAATCCAT
CATTGATTAATTTattgtattcaatttttaagTAGTGTGTAataaattgt
aaatattatatcaagaatattttttacctttaaaatatttgtttgaAAAT
AGTGAGTAGTTAGGACGTGATTTCAGAATTTTATTGATGGCTTCACTTAA
GTTAGTATGCCTAAGCCAGACGGCTCAATTTTGGTCAGAACCTAAGATTA
AACTTAAATTTAGattaattgaaattaaaaacaatcTCAGC
Run BLAST on NCBI

transcript from alignment at sc0000084:603181..615399+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008297 ID=TCONS_00008297|Name=TCONS_00008297|organism=Clytia hemisphaerica|type=transcript|length=12219bp|location=Sequence derived from alignment at sc0000084:603181..615399+ (Clytia hemisphaerica)
tttcatttgagttggaTTTATGATTTCTAGATTTGATATTAAAGGAGCAA
ATAAAACATTTGTTACTGGAGTaattatttttgtcaataaaaataATGAA
CAAAAAGAGAGCGAAAAAGGTCCATTTTCACTCACCACGATTTGAAGGTT
ACCAAAATTTGGGCACCTTAGAACAGGGTAAATTTTTGCTAATTAGGCAA
TATATAACATAATAAGCCTTAACTTGTGAACGAGCATAAATTAGTAATAA
TACATGATTATGGATTTATACATGATTATGGAtttaaataaatattaaaa
atagatattctGTATATCTTTTTCTTCTGTCTTTCTTCTTTTGGTGTCGT
TCCAATCTCAGAGCATTTTAAACTTTCACAAACAGCTTGAATCTTTGACC
GCCATAATGGGCGATCCATTGCAATAACAGTCCAATCGAGTAAATTGATT
TTCTTAGGCAAATAGTGCCCGTTTTAATATTATATTATGATGCTGTTGTt
tagagtttttctttttttttgagcaATTCCAAATANCATATTATGATGCT
GTTGTTTAGAGTCTAGTGTTTTTGAGCAATTCCAAATATACACCTGTTTT
TAAACCTAAAAGCTAAGAGATGATTTGATGATCATGTTAATAGTAGGGTT
GAGTGGCGTAAAATATTACATCTTTGATGGTCTAAATCTTTAACCTGCAC
ATTCTTTTCATAGTCCTGAGTAAATCCTCCAATTTTTTTGTCTACGTAAC
TACTTTCAAGTTTTCAAGTCAAGATATGACAATTTGAAATCTCTGAAAGT
Gagttcttacaatgttcttacgtcaaaattccattgttttcttgctaaaa
gtaaaaatattgacTTTCAGCTATTTATCATGCATAAACCATGCCTTGGC
CACTCTTGATAAAGTTTACTCCCTCCTTCTTTCCCTGGTAAAGGGCTTGG
AAATTTCCCAATTGAACGGGATTGATATTTTAACTAGCTTTTACTCAAGA
TAATTAGATAATTCTGCAATTTGAGGGGTTTGTAAAAGGTTGGATAAAAA
CCTCTTCCACCTGGGCTACTAAATATTTTCCTTCATTTAGATCGTAAAAC
TCCTACTTACCGGTCTATGTATAGGCTACTCCTGCGtctaaaaaagttga
ttttaccTTGGTTTTCATTTCAGCATCGTCTATACCGAGCAATAGTCTAC
CTCACTTGAGTCGAAGTGCAAGGTCACAGAAAACAAGTAAAGCTTCACTG
TCGGTCAGTGGAAGGAACATGTTGTCATCAAGCAAAAGGtatgatttttt
atgatttttactGCTGCATTATAAGTTTGGCTGGGTGGGATATTTTTGAG
TAGCCGCCGTTCGAATTGAGAGACGGCGACAAATTGAAGAAAAGTCGGGA
CTTCTAATCTTTGTAGGAAATAATTCATTTTGTTATGTCGATCATCGACT
TTCTAcagttttttgtcgaaaataaagaaaaaattcaaccgTGTCAAGTA
GAGTCATGGGAGATTAGACTAATAGTAATAATCTTTTCCGACGCACGATA
ACATGATAACAATAATTCTCCTTCCCATTGTTTTTGGTATAGCTGACTTC
AATAAGATCGAAAAAGGTGTGCCTAGCAGTAAATCCCAGATACAATTCTA
GTCACATTTTAAGCATTTATAAGTTAGAATTTTCTGTTCTAGTATTGACG
TCTCAACCGTTGAAAATGAATACATTCGAAACCTTCAANGTATTTTAGTA
TTGACGTCTCAACCGTTGAAAATGAATACATTCGAAACCTTCAACAACAA
GTTTATTTCTTGGAGTTAGAATGTGATTATTTACGTGGACAAGCTAACAG
AGTGCAGGAAATACCCAATGATATCACCTTAGAAGCTGGCAAACTCGTCA
AACGACTAAAGGTATATTACTTAGGAGATAAGTATGTTATAGTTGTGAGA
CTATGTAGATGATTTTTACTCTtgatattctttttatttttaatatacac
ttttttataaaaacacgaagctgaaaataaagtaaagtaaagaaactaag
cgtataaagaacatcgtaagaacacttttaagcgaccgtagtgcagtgct
ATAGCACATCCGACTACGGTGCgaaaggttgtgggttcaacccaatgaag
tagaagccgaaggctagaagtcaatctctttggtaggatttaaagccaac
aaatcctaccaaagttgcgcggccttgagcggttcgcctggtttttacac
aaatgacagactgaaactaaaatttaccgctaaatttcaaaaaaaatatc
aatcgtaaacaaaggaatttctagattcaatctgtcgtcaaaaatacggc
gcattttttaaggcttcactttttcttgcctgagaaaggtcagagattga
actctagcccttcgggctttaaactcaatggttcaaCCTCTAGATGGGTC
ATAcaaaagattcccaaaatggtgcctctctgcttgatgaaGAGcgaaga
gaaggatcaagggtaagtgaagcaatccagggagaaaaaaGTGGCGCCCt
accctaccttcgggtagatagctgtcgcctccgactgcgctcgcagactt
acttacgtAAGAACATctaagcctgaaaatttcaaaaagataagaacagc
caagcctgagccaaaatttaccggttcttataaaaaaaagcgtgtacttt
ttaaactttcttctTACTTTCATTCAGATAGCACAAAAAGAAATTCGGGA
TCGCGATTCAGAGATTCTAAAGCGTGACGACAATATCAATTTACTGCAAC
ATGAATGCGAAAATCTTACATCCAAGATATCGATACTTGAAGGTAACCTT
CCTTTGTTTTAACAATGTCCCTCATTTTGACTTTCAAATGGAATGTGGAT
GGGACACCATGAACTCATTGACAGAATTTACTCTCAAGTGCCTAATAGTT
CCCCTGCCGCTTTTTAATTCTTGACACCCTCTCTCATTATTCCGACCACC
CTGTTTATGTTTAGGCAACTGAGGGTATAAAAAATGTAGCTTTCGGGTTC
AAAAATTTGTGCCGGTTTTACCAAGGAGAATGTAATAAATTGTAAAATAG
TTCTTGGTGCTGAATTGAAGAGAAGTGAGAAGTGTTCTTTAGATAGCTTA
CAAATGAAAGCTTTCTAGCTGATTTCAACACGGTTGCATTTGCCTGCTGA
AAACTTTATCTTATTTGAGTTTTCTAAAGTAGATTTTTCTTTACCATAAC
ATTTAAGAGGGATTTCGATAGCCTAGGCTGCTCTCTTGTGATGGGGGGAA
AGTAGGGAGGCAAGTATAACTGATTGATATCAGATTTCTTCACTTAGAGT
GACCAGAGATGGAAAAGTTCACCCTTCCCATGTAGTCAAGATGTCAAGAT
TAGACCTAGGCTAACTTAGCATGTTTTATTTTCTTACAGATTCATTCGCA
GCAGAGAAGAAAGAACTTATTAACGAAGTCGTCTCGCTAAAGAAAGAACT
CGAACGTAAAGAGCTCGATCAAGCTCGTAAAATCaatgaaaacgaaaaaa
tcaaacttgactACGATACTACGATCGTAGACTTGAAAGAATCGACAAGC
AAGATCAACGTCACATTAGCACAAGTAAGTCTTACATGAATTTTTTATAC
TAGACTTCGAATCAGTGTTTTCAGTACGAGTTGTACTTTCtgtagaagtt
ttttttgctataagaacaaattatgtaagtaaggtTTTgctgtcaaaaaa
taagaacatttcaagaccATTTTAAAACTATAGAACGATTCATTTTCTTG
AGAAGTTGTTGCAAGGaactaaaaatagaaacttCTTAGAAAGAACATCC
GTCATCTCTTGCTCATCACCAGGAAACTTGAGGATGGAAGTAAGGTCTAG
TTGAAATATATAATTtagtaaaaatctttaaatttaacCACCCAGCCATT
AGAATGATTTGAagcgcttatcaaataaaagttaaaccacGATTTAACCT
TTGTTAAATCCAAAGACACAGTAAAATGGGTTTCGGATTTATTATGTGAC
CGAAAAAGAGGCTCAAAAAGGTTCAGATTCTGTACTTATTTTTAATCGTT
CATCTCCTTATTTTCTGATAGCTTCACGAGAAAACAGACGAATATAACAA
ACTTCGCGTTCTATACGAAGAACAGCGCGCCGAATGCTTAAAAATACAGA
CTGAGTACCAAGAGCTCGAAGAACGATTCTTCAATTCCAAGGCTAAATCA
ATGGAAGATGTTGGACGCAGTCTAAAGgtaagattttgtttttttcgtgA
TGGAATATTATGGGAGTGTGAATCTTCGGTAGAAATGATTTTAAGTTGAA
ACTTTACTCAagcaaaaaacaaataaagCGCTAGAtatattcatagaatt
atatttcacaggtctatcgacctctacgaaataattttagatttatgaaa
tattgtctaattcttcatctgtcgtccagtcgtcagaagatattgacaga
gaagacgttgttttggtctttgtcctagaTTTTATTCATTTGATGCCGCT
AAAATCTTTTGGAAAAGTTAGAGAGTCCTCTTTAGCCAATCATTCTGTTC
TTCTACATAAATTTAGTATATTACCTCCTCATTAACCTCTTTGTTCTTTA
TACACAGGaagaaatgaagacattgcgTTTTGATCTTcgtgaaaaagaaa
tcaaagtggAACAAGAAAGGACACTAAGACTAAAGGTAACTCAAGTCTTG
GAGAGTGTTATGATATCATTTATACAAGTTCTCCCAAAAGGTGAATGGCT
CCTACTCCTTACTACGAAGTAGATATTCCACCTTCATTCAAATAGGAACG
CGGCACACAGTTACCATGCTGCATTGTGATGAAACTTGAACAACGCGGGA
AAGAAGAGCTCGTTGTGAGTGTAGAAGGGTATAAGTATTATCAACCATAA
TCAATCAACCATTTCAGTTATGATGACTGGCAtatcacccacactcttgt
attaGAGTTACGGTACCCATCTCCCCATTTACCAAGTGAACCGTAGTATC
ACACTGGGAATCGAACCTCCTAACACAAttaccactataccacaacaAGA
CTGTAATTTCTAagttctttttgaaaataagcaGTGGTAGAATTTGTGAC
AAACGATTGTAATTACCCTTCACTCTTCATTGCTGCTTTAAAATCTGCCC
GAACATTTCCACCCTTGGCGGCATTAGCTCCCAAATTTACACTCTTTTCA
GGGCCTTAGTCTAGACAATAGGATCGTTTAAATTTGATTAGGAAATTCAC
AAAATCCCATAAAACCAACTTAGAGGTATAGATGGAGAATCTCTTGAAAG
GACACTTTTTGATATTGGAACTCTTCCATTTCAGATGTCGGATGATTGTG
CCGCTTTGGTGAAAGAAAATGCCACTCTGGCTTCACAATGCAGTGAGCTA
CAAAAACATCTCGACATTGTAAGTTGGATTTGTCTCCAGTAcactactct
taggttccaaataaattgGAGttggttcgaataaacggggggggggggNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAAAATaag
ggccttctctttgacagctgaaaatattcttaaaaattaataaacggggg
gggtcctaataaggtccggggggttggaaaattttcgcaaaattaaCAAC
TgcggggggcgtttatttgaaacctAAGAATATTCGTTTTTTAATTGGGA
GATCGTGGAAAGccaaacatttttttccaaaaagataTTATCCTATTTGC
CCTCTCTTTTCAAGTAATATCCCAGCTACCCTCTATCCTCAAGTAAACTA
ATCAATGTTCTTCAAACCAAAATGTCTTGATAATCCCGATCCCAAATACT
TCGACAATTTAAaggtcattcattcattcattaatCGCCATAGGAACGAG
ATTACAAACATGACAAATCATTACGTAATCAAACAAATATTCAAGAACTC
GTCACGTTGAAAGAAGAACGAAAACATTTGGAAAGGGATCTGGACCGAGC
CAATCAGCTGTTAGAAATCGAAAAGAATAAATATACAAGACTCCTTGATC
GAGTAAGTTAACTGACCGTCATATTAGCACCCTGTTATAAGAATAATTTG
TGATGGTGACATTATAGTGACCAAAAAAAGCCTGTTGTGAAGAacaataa
gaaaaatgaaaataatgtcAAAAAGGCTGGAATCGTTTATAATCCATGTA
ATACATGTTATATGATAGTATGATAGTAGTAatgggataatatcagtttg
tacAGCAATTTGTcccttcaaatttttttcacatattTTCCGCTTTTTCT
GAATTAGCCATTTATCCATGCTAGACTAAATGCTCAGGCAAAGCACATTT
TTGTTAAGTTTTCATCTTTCAGGAGCGTATTTTATTTTCGAATATCGTCG
TTGAATACTTTAGTTATTTTTTACTACACGATCAGTAGAAATCAGTTTAG
GCTCAGTTTAGTTTTTCTTGTGGGGTTTATTTAAAAAGGTCACTTCCTCT
TTTACACAACGGAAGTTGAAGGAAGAATTATACTTAAAAGTTTTCATCTC
CCATAGTTCACGAATGAAGAAGAAAGACATACCAGAGGTTAGTTGGGATA
TTCATTCATTCACCGCGTGTCCGAATTGTCCGAAAAAGGGATAGTTTTCC
TTTTCTCCCaacttctttcattttcttaaaggttttagtCAAAATTCGGA
TGTGGAATTTTTCGCGGGAACGGGTAGACCTcgtgaaaattgtgaaaatt
aatccacctAAGGAAGTTCTATTGTTTTTCCGTAATAAAAAATTCCAATC
GCATTTTGCAAATAATGAAATAGGGAGGGTGACACTCAACTGCATGTGCT
TGGTTCAAAAGTAGATAGGAGAGGGGGCCCGCGGATTAGGCttggcaaaa
gtttttatggtcGAAAAACTGATGTTTTAGGCAAAATTCCTAACACCCAA
AATAGACGAatatttgacaaattttcaaaaatgaattaaaagaaaattat
caTTACCAACGAATAGAGCAtcaaattttgagcaaaaaagtatactacaa
catctacgggaccttgaaaaccctTGAAATTGGACTaagcaaccttgaaa
accttgaaagtgAATGTAATGGGAAAGAATTCcttgaaaaccttaaaaat
gcATGATTGTGGCAGTATAGTTGTCTTGTTTTGGCTTGGGTCCTTACTGA
AGTTTTGGTCTACGCTAAAGTTCCAAAAAATTTCTTGCTCGCTTTCCTCG
CAATCATTGTTTCTGGACCAAATAATGGTAGTAACCTCCATGCACCTTGT
CGACACAGTCATATCCTACTACtattttaagtcaattttagttctgaaaa
ccttgaaaatacccaataaatggtccaaaaaaacttgaaaaacactaaaa
ttttgccaaaaaaaccttgaaaatgggGAAAAAAATTCCGTAGACACCTT
GCAAGTCTTATACTcaaaaatgtaaagaaatacatgctttcaaagttcaa
aattcTGTCAGATGGAgtacgattgacgtcaaattttgtctaaaatgtAA
CGGATTCCACAggattttaaactttaaaattgtcatcatcatcatcattg
ctcgaccgcagtcgagacaaTGGATTCCACTCGCTGGCGCCAGGAGTCGC
GGTTGCGCATAGCAGTGCCCAGGTCGCTAAGATCAAGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCTCTAGGTAGGCCTCGTCAAGTTTAATC
TTGGCAGAGTTAAGTTGCTCCTTGCGTCTCCGCGTTGGTGCTGCATTATA
CAAAGAGGAAGCTTTTGTTAGATTTGGATTTTTCCAATAAATTGTCATAT
TTTAGTGTGTTTGAGTATAAGACTTGttgtagtatacttttttgctcaga
atttcatccTTCATCCGATGATAATCATTTGTGTTGTTCgacaaaaaatt
gtcaattttttactcattttgggGGTTAGGAGTTTTTCCTACAACGTTAA
ATTTTTGGCCATGGCCTAATTCGCGGGCCCCCTCTCAAAGTTTCAAAATC
CTATCTACTTTCGAACCACGAAAGAAGTTATAGAACCTAAGGattgcccc
cccccctactATCATACCTTTCAATTTtgttatttcagccaaactacaca
GTTCGAAGCTGAAAGCAGAGCTTGAAGAATTAGAAGGCTTGGAAACagtt
ggtacaaaagaaaatATCGCCTTACGACGTGATAAAGTTTTAATGAGTGA
TGAAATCGCCTCACTGCAATCAAAGGTATGGATTAAGTTTGACGTTCTTC
TTCTAAAGTTCGTGCTATGAGGGGGCAGTAGATACTACACCTCGACATAT
CGCTTTCTACCATAAACAATTCTTGGTTCAGGGGAAACCAACCGGGTcaa
ctattttctttttcttcaagttATACccagaaacaaaatttttatcCTAG
CCTAAACTTTCCGAATAGGTCGACAATTACCTAAAAATCAACCATAAGTT
TCCTAGCTTGATGAGTGTTCCGGAAAAATCACTTCTCGATTAGATTCAAG
GGAAATATTCTCACAAAGTTCGCGCTAAAGTTAGACTAGAAAACCAcctc
gttgtatttcgctgcagcttACGCTTGCAATGGGCTCACTACGTACGCTG
AATAAACCACTTTACCACGGCAATttctatattttataagaactcgttat
aagcactattcccgcgttcctgtgtccaaggaaagacaaacgcttgctag
tctactctcgggtacctaatagccgtccccccccgcttattaatttttgg
aaaaatgtttttaaaagttccctcttttgtcctaattcagctgtattagc
ctccttttcaaaaattttccacccgggacatttttattccaacccccccc
ccccccgctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccct
gcttattccaaaccccccggctattaggtacccgagagtaagcaAAAGTT
GGTTCTGCGGATAAAAAAAGTTTCCGCGAAAGTTAGTTTTCTTACGGTAT
TCATTGACCATTCGCTTTGTCTCAACAGTTGGAGGATAAGAACGATCACG
TGAGAACCTTACAAAACAAATTATCCAATTTAAACGTCGCATATGATGAA
CTAGATCATAAACACAAAACAGAATTCAATCTCAATTCAATCCGTTGGGA
TGAGTTTGAAAAAATGGCGGACCAGATGAAATCGTTCACTCGGTCCATGT
CTCCTATTCGACAAAGTCTTTCCAATACTTCTCTGGGAAGAAGAATTCAG
GAACTCGATCTAGATCAAGACACCTAACCTGCTGGACACTGGACTGAAGA
TTTGTTAGGATTGTCGGATATGACCTATATCATCTCAACACTTCTTTGGT
TGCTAGTTGGAGCATTATATCAAGAAACTTAGCTTAGCCTGGATACTAGT
TGAAGGCTTGTCTGTAAGCCTGTTGACCTTTATATCCTTCAATAATTGTT
CATTTAAATctcttcaacttttttcatatttatattattttatgaaaaac
tCAGGAACTGAAGCTGAATAAAGAAAGCTAGCTTAGACTCATTAGACTAG
TTTAATAGTCTTATGTGTGGTAATATGAAATTATGTCAGACGTATGCGTG
ATAAATTAGGGAAAGATTTTAGGTTCCATAGTTCATCGGGAAATCTTTAA
TGTTTCGATACCTTatgtggataaattttcgcgtggattaattttcgcgg
ttttcgcgaattttggccatttttgcgaaatttaatccacgcgaaatctt
taaatcctcgtctcgcgaaaattagtacacgcgaaaagttatccacttaa
ggtacgcTGGAGAGAAAGACTTCAaattaagaaaaagtttctgattgtac
acctctgtgtcacagacccactgggatcccaggcccactggaaaatttgg
caaaaatttcgtccccggtgggaaaatacactggaatttcagccccactg
ggaaattgactttgatttcatccccattcgattCCATGCTCAAAAGTTTC
ACTACAAACCAATCCCACTGgatgtttcattttttaactttggaacaata
gagtttTTATacccattggaatttcaataggaatttttatccttactgag
gaaaaaagttccaccgggcctgtgagacaggggtgtgattgTGTAGATAT
TTGAATTAACGAAGAAAAATCAATCCATCATTGATTAATTTattgtattc
aatttttaagTAGTGTGTAataaattgtaaatattatatcaagaatattt
tttacctttaaaatatttgtttgaAAATAGTGAGTAGTTAGGACGTGATT
TCAGAATTTTATTGATGGCTTCACTTAAGTTAGTATGCCTAAGCCAGACG
GCTCAATTTTGGTCAGAACCTAAGATTAAACTTAAATTTAGattaattga
aattaaaaacaatcTCAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004660XLOC_004660Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008297-exon-sc0000084-1491911889:603181..603357TCONS_00008297-exon-sc0000084-1491911889:603181..603357Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1510915933:603181..603357TCONS_00008297-exon-sc0000084-1510915933:603181..603357Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1575043694:603181..603357TCONS_00008297-exon-sc0000084-1575043694:603181..603357Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1491911889:604354..604468TCONS_00008297-exon-sc0000084-1491911889:604354..604468Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1510915933:604354..604468TCONS_00008297-exon-sc0000084-1510915933:604354..604468Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1575043694:604354..604468TCONS_00008297-exon-sc0000084-1575043694:604354..604468Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1491911889:604873..604903TCONS_00008297-exon-sc0000084-1491911889:604873..604903Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1510915933:604873..604903TCONS_00008297-exon-sc0000084-1510915933:604873..604903Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1575043694:604873..604903TCONS_00008297-exon-sc0000084-1575043694:604873..604903Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1491911889:604960..605091TCONS_00008297-exon-sc0000084-1491911889:604960..605091Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1510915933:604960..605091TCONS_00008297-exon-sc0000084-1510915933:604960..605091Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1575043694:604960..605091TCONS_00008297-exon-sc0000084-1575043694:604960..605091Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1491911889:605908..606022TCONS_00008297-exon-sc0000084-1491911889:605908..606022Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1510915933:605908..606022TCONS_00008297-exon-sc0000084-1510915933:605908..606022Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1575043694:605908..606022TCONS_00008297-exon-sc0000084-1575043694:605908..606022Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1491911889:606620..606804TCONS_00008297-exon-sc0000084-1491911889:606620..606804Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1510915933:606620..606804TCONS_00008297-exon-sc0000084-1510915933:606620..606804Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1575043694:606620..606804TCONS_00008297-exon-sc0000084-1575043694:606620..606804Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1491911889:607302..607457TCONS_00008297-exon-sc0000084-1491911889:607302..607457Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1510915933:607302..607457TCONS_00008297-exon-sc0000084-1510915933:607302..607457Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1575043694:607302..607457TCONS_00008297-exon-sc0000084-1575043694:607302..607457Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1491911889:607838..607915TCONS_00008297-exon-sc0000084-1491911889:607838..607915Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1510915933:607838..607915TCONS_00008297-exon-sc0000084-1510915933:607838..607915Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1575043694:607838..607915TCONS_00008297-exon-sc0000084-1575043694:607838..607915Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1491911889:608565..608648TCONS_00008297-exon-sc0000084-1491911889:608565..608648Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1510915933:608565..608648TCONS_00008297-exon-sc0000084-1510915933:608565..608648Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1575043694:608565..608648TCONS_00008297-exon-sc0000084-1575043694:608565..608648Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1491911889:609274..609432TCONS_00008297-exon-sc0000084-1491911889:609274..609432Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1510915933:609274..609432TCONS_00008297-exon-sc0000084-1510915933:609274..609432Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1575043694:609274..609432TCONS_00008297-exon-sc0000084-1575043694:609274..609432Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1491911889:609937..609967TCONS_00008297-exon-sc0000084-1491911889:609937..609967Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1510915933:609937..609967TCONS_00008297-exon-sc0000084-1510915933:609937..609967Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1575043694:609937..609967TCONS_00008297-exon-sc0000084-1575043694:609937..609967Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1491911889:612669..612805TCONS_00008297-exon-sc0000084-1491911889:612669..612805Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1510915933:612669..612805TCONS_00008297-exon-sc0000084-1510915933:612669..612805Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1575043694:612669..612805TCONS_00008297-exon-sc0000084-1575043694:612669..612805Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1491911889:614009..615399TCONS_00008297-exon-sc0000084-1491911889:614009..615399Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1510915933:614009..615399TCONS_00008297-exon-sc0000084-1510915933:614009..615399Clytia hemisphaericaexon
TCONS_00008297-exon-sc0000084-1575043694:614009..615399TCONS_00008297-exon-sc0000084-1575043694:614009..615399Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:603181..615399 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00149238	0	0	0	2.63279	4.85438	3.26201e-07	0.200026	0	2.37259	0	0.165799	2.20757	0.651243	0.497275	2.87535e-09	0.406483	0	0.44721	0.252811	0	0	0	0.451432	2.2914	0.865524	0.300635	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008297 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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