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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008231 ID=TCONS_00008231|Name=TCONS_00008231|organism=Clytia hemisphaerica|type=transcript|length=1089bp
GCTTTAtgctttgatgtttttgattgGTGGTGGTGTCAATGTGTCGATCA
TTGTTTTCTTCttgttcaaatcaaaaaaagaagatttgaaCTCCTACCAT
TTTATCATGGCACATCTATCTCTTTCCGACCTTACTGTCTGTTTAGGTAT
CCCTGTTGTCGAAATGCAATACACAATGGAAAGATGGTATTCCGGCGAAT
TCTTGTGCAAGGCCTCGTCTGTTCCGTATTCCGGCAGCACTGTGTCCTGT
TGGATTCTATGTGGGTTGGCTTATGACAGATATCGCAAGATAAAAGATCC
CATGGCCGAGAGTTATAGTAAGATGAGAATCAGTTTATGTTGTTTGATGG
TTTGGATGACCGTTTTCCTCATCACAACACCGCAGTTTCTGAGAACGGAA
TATCATGCCAACAGTTCAACAATGCTATTTTGATCCTTTCCAAAGCTTTT
CACTTCCATTCGCCATCGGATATTACGCCTTCTATTTCATCATCAACGCT
GTGCTTCCCCTCACTGTTTTTTTGGTGCTCTACACCAAAGCGCACAAGTG
CCTTCTCTCTAATTCTCCTAATTTGAATGGTCAAGCAGGAGAAGCAATCG
CAACACGAAATAAGAGCGCTTTGAAAACATTGAAGATGTTGATCGTACTA
TATGCAGTTTGTATCGTTCCTGGAAGTCTGTTTGGTTTGGTGTTTCCATT
GCTCGACTATATGTTACCCTGGTTCAACACTTTCGCTTGGTCTGAAGACG
GTTTGATACTTTACTTCTGCTACATGGCTTCTGTTTGAACAGCGTCGCCA
ACTGTGTTATTTATGTGGGGAGGACTCTCGAATTCCGAAGATTTCTCTTG
AAACCGTTTGGGCGTGGCGAGACAGCTCCTGGTGCACTGAATAACTTCCC
AACTCAAGCTGCTTGAATTGTTTTTGACCAATCTGAATGATGAGgatttt
tatttaaattatCGGTAAACAAACACACTAAATGGTTGCTTTTGCCACCG
TTTGATGAAATCAAGAACCCAAAAGTAAAAAGCCAACTGGCTTGACCATG
CGAGGAACTTAAGAGTGCTGTATTTAACACgtgtatttt Run BLAST on NCBI protein sequence of TCONS_00008231-protein >TCONS_00008231-protein ID=TCONS_00008231-protein|Name=TCONS_00008231-protein|organism=Clytia hemisphaerica|type=polypeptide|length=143bp
LYALMFLIGGGVNVSIIVFFLFKSKKEDLNSYHFIMAHLSLSDLTVCLGI
PVVEMQYTMERWYSGEFLCKASSVPYSGSTVSCWILCGLAYDRYRKIKDP
MAESYSKMRISLCCLMVWMTVFLITTPQFLRTEYHANSSTMLF Run BLAST on NCBI transcript from alignment at sc0000082:393051..394139 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008231 ID=TCONS_00008231|Name=TCONS_00008231|organism=Clytia hemisphaerica|type=transcript|length=1089bp|location=Sequence derived from alignment at sc0000082:393051..394139 (Clytia hemisphaerica)
aaaatacacGTGTTAAATACAGCACTCTTAAGTTCCTCGCATGGTCAAGC
CAGTTGGCTTTTTACTTTTGGGTTCTTGATTTCATCAAACGGTGGCAAAA
GCAACCATTTAGTGTGTTTGTTTACCGataatttaaataaaaatcCTCAT
CATTCAGATTGGTCAAAAACAATTCAAGCAGCTTGAGTTGGGAAGTTATT
CAGTGCACCAGGAGCTGTCTCGCCACGCCCAAACGGTTTCAAGAGAAATC
TTCGGAATTCGAGAGTCCTCCCCACATAAATAACACAGTTGGCGACGCTG
TTCAAACAGAAGCCATGTAGCAGAAGTAAAGTATCAAACCGTCTTCAGAC
CAAGCGAAAGTGTTGAACCAGGGTAACATATAGTCGAGCAATGGAAACAC
CAAACCAAACAGACTTCCAGGAACGATACAAACTGCATATAGTACGATCA
ACATCTTCAATGTTTTCAAAGCGCTCTTATTTCGTGTTGCGATTGCTTCT
CCTGCTTGACCATTCAAATTAGGAGAATTAGAGAGAAGGCACTTGTGCGC
TTTGGTGTAGAGCACCAAAAAAACAGTGAGGGGAAGCACAGCGTTGATGA
TGAAATAGAAGGCGTAATATCCGATGGCGAATGGAAGTGAAAAGCTTTGG
AAAGGATCAAAATAGCATTGTTGAACTGTTGGCATGATATTCCGTTCTCA
GAAACTGCGGTGTTGTGATGAGGAAAACGGTCATCCAAACCATCAAACAA
CATAAACTGATTCTCATCTTACTATAACTCTCGGCCATGGGATCTTTTAT
CTTGCGATATCTGTCATAAGCCAACCCACATAGAATCCAACAGGACACAG
TGCTGCCGGAATACGGAACAGACGAGGCCTTGCACAAGAATTCGCCGGAA
TACCATCTTTCCATTGTGTATTGCATTTCGACAACAGGGATACCTAAACA
GACAGTAAGGTCGGAAAGAGATAGATGTGCCATGATAAAATGGTAGGAGt
tcaaatcttctttttttgatttgaacaaGAAGAAAACAATGATCGACACA
TTGACACCACCACcaatcaaaaacatcaaagcaTAAAGC Coding sequence (CDS) from alignment at sc0000082:393051..394139 >TCONS_00008231 ID=TCONS_00008231|Name=TCONS_00008231|organism=Clytia hemisphaerica|type=CDS|length=432bp|location=Sequence derived from alignment at sc0000082:393051..394139 (Clytia hemisphaerica)
TCAAAATAGCATTGTTGAACTGTTGGCATGATATTCCGTTCTCAGAAACT
GCGGTGTTGTGATGAGGAAAACGGTCATCCAAACCATCAAACAACATAAA
CTGATTCTCATCTTACTATAACTCTCGGCCATGGGATCTTTTATCTTGCG
ATATCTGTCATAAGCCAACCCACATAGAATCCAACAGGACACAGTGCTGC
CGGAATACGGAACAGACGAGGCCTTGCACAAGAATTCGCCGGAATACCAT
CTTTCCATTGTGTATTGCATTTCGACAACAGGGATACCTAAACAGACAGT
AAGGTCGGAAAGAGATAGATGTGCCATGATAAAATGGTAGGAGttcaaat
cttctttttttgatttgaacaaGAAGAAAACAATGATCGACACATTGACA
CCACCACcaatcaaaaacatcaaagcaTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008231-exon-sc0000082-1491911889:393051..394139 | TCONS_00008231-exon-sc0000082-1491911889:393051..394139 | Clytia hemisphaerica | exon |
| TCONS_00008231-exon-sc0000082-1510915933:393051..394139 | TCONS_00008231-exon-sc0000082-1510915933:393051..394139 | Clytia hemisphaerica | exon |
| TCONS_00008231-exon-sc0000082-1575043694:393051..394139 | TCONS_00008231-exon-sc0000082-1575043694:393051..394139 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000082 | supercontig | sc0000082:393051..394139 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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