TCONS_00008124 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008124
Unique NameTCONS_00008124
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length909

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008124 ID=TCONS_00008124|Name=TCONS_00008124|organism=Clytia hemisphaerica|type=transcript|length=909bp
TAGTGGCGGTATTTCGATCAAACCTAGTAGTGGGATGGGTTTGATGCGGG
GAGACATGGGTGGAGCCGCTTGCGTTTTGGCTACGCTGCACATCATTGCA
AAATTGAAGCTACCTGTCAATTTATCAGTGCTGGTTCCCATGGCAGAAAA
TATGCCGTCTGATCGAGCAGCCAAACCAGGAGATGTTTTTACTGCACTCA
ATGGAAAGACCGTCGAGGTCGATAACACAGATGCTGAAGGACGAATGATC
CTGGCGGACGCTTTATGCTACGCGGACGAATTTCAACCGTCTACAATAAT
CGATGTCGCTACACTTACAGGTGCAATCGACGTGGCGTTAGGTGGGGCAG
CCGCTGGAGCTTACACAACGTGTAACAACTTATGGCAGAACATGGAACAG
GCCAGTTACACGACAGGCGATCGTTTTTGGAGAATGCCTTTGTACAAACA
TTACACCAAACAAATGAAATGTAGCTTGACTGCTGATCTACGAAACACGC
AGAAAAAAGCACGTTCCGCTGGGTCCGCAACTGCTGCCGCTTTTTTAAAG
GAATTTGTGACGATAAAAAGTTGGGCCCACCTCGACATGTCGAACGTCAA
AGCGAACTCGAGTGGCGAATTATCTTATCTCGGTCCAGGCTTTTCAGgTC
GTCCGACAAGAACTTTGGTTGAAACCGTCCGAAATATTTTTACGtagaaa
aaagaaacattatttttatttgacaaGTTTTTATAGTTTAGATCACACAT
AactttagaatttatttttgtatttttgatggAAACATTTACCAATtaca
aaaaactcattttttcaatgcaacGATTTCATCCAAGCCATACGCCCCTC
TTTTATAATTGAGATAATTCTCAAGCtgcttcaaatttttttgtaaaacc
cATACTTAA
Run BLAST on NCBI

transcript from alignment at sc0000082:456979..467986+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008124 ID=TCONS_00008124|Name=TCONS_00008124|organism=Clytia hemisphaerica|type=transcript|length=11008bp|location=Sequence derived from alignment at sc0000082:456979..467986+ (Clytia hemisphaerica)
TAGTGGCGGTATTTCGATCAAACCTAGTAGTGGGATGGGTTTGATGCGGG GAGACATGGGTGGAGCCGCTTGCGTTTTGGCTACGCTGCACATCATTGCA AAATTGAAGCTACCTGTCAATTTATCAGTGCTGGTTCCCATGGCAGAAAA TATGCCGTCTGATCGAGCAGCCAAACCAGGAGATGTTTTTACTGCACTCA ATGGAAAGACCGTCGAGGTTGGTTCTATTTTACTATCCGAGGACGCTGGT TAGAAAGATATTCGTGTTATGAGCTTTTGTACCATATCTTGTACATATCC ATTCTTTCAAAGATGTCAAATAAATGGGCCccttgtgttttttgtttgct gtttttttttactctcGCAGCAGAACCCCTTATAACATTGATAAATTTCT GAAAACACTTTTATCTGTCAAAAAAATCcattattttgctccaaaatcTG ATAATGACTGTTCGGATAATAATCCCCCTCGCCTTGTAATCAGCATCTCC CCATTCAGCAAATTTCAAACTCCCTTTNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNGGTTTGGCGATGGCAGAGGGTCAGAAT TGGGCTCGTGATTTGATGGAAACGCCTTCTAATTTCAAATATCCTGAACT GTTTGCTGACAAAGTTGTTCAACGATTCTCGGCGTTCAAGAATGTTGATG TCATCGTCAGGTGAATAAATTATTGTGAATGATTTTGATCTTTGAAAATG AACGCATTTTTCCGACTCCAGGTAGGTTTGTCGTAACAAGAACTTTtaca tataaaatacaaaaacctAATGAAACAAatagaagaagaaacaaaatcat taattttGAGTTGACCAATAATAGTAcatgttttataagaatatgctaag aactGTCACCATcgtatatttttacaaccgaACCGTTAATAAGAATCTCG AGACTTCACAAAATtgtcatacttttttttttgggtgGGGGGTATGTATA TAGATATAGGCAGGGTTTAGATTCTAAACTTAGAATGTCGTTAAGAATAT TATGGGTTGATTTTTATCCTAAAGttgagaatatccatgatgaaatggaa aaaaataccATTCTTATAACAAAAGCGTTTAGGGTTTAAGAATGTCCCTG AGCCATTGGCTCCTTGCAAAGTATCACCCTGTATTAGCTGTTTGGACCAT CTTGCAAGCAGCgggctttcattttctttcattattttcCAGAGATGATG TCTGGGCGCGAGAGAAAGGAATGGATTGTTTCCTGTCAGTTGGTAAAGGT TCCGATAAGAAACCCATGTTTGTGGAACTTCATTACAACCAAAATGCAGA TGAACAAAAGAAAGTGGTTCTTGTTGGAAAAGGTAATTCATTTATCTACA TCAACAAACATCCGGTTGTATGAAGTAGTTAGACCCCGCTGGCTTGAATG ATTGATGCACGCGAAGACGTTGAATTGCAAGAGTTTGATTTGTGACGAat caaatagcttaaaacggATCACGTGTCTTAAATTTCATTCATCTCTCCAG TTGGCCGGGAAAAACAAAGATAAAGCTTTGAGGCaactttttgaacaatt ttttatttttattttaggaaTCACATTCGATACgtaagtgacgtcatttt ttcgtTTTGTGTGATTGTTGAGTGTTAAAAGACGAAGCAGAGAAGATATT CATCTACATATTCATCGACAACTCAGGAAACTTTCCGTACTACTCATCAT GTTAATAAGAAGATGTgcactgaaaataattttcaaaatcagcTGGCTAT CGGATTAAAAGTGTATCTTGATCGGTTTACGGGTGACGTAATAAAATCCA GGGGGTCTCGAGTCAAAAAGGAGATTTTGCTGATCGAGTTggtaagattt tatttattataattttgaCTTCTTCATTTCATCTCTCTAGTGGCGGTATT TCGATCAAACCTAGTAGTGGGATGGGTTTGATGCGGGGAGACATGGGTGG AGCCGCTTGCGTTTTGGCTACGCTGCACATCATTGCAAAATTGAAGCTAC CTGTCAATTTATCAGTGCTGGTTCCCATGGCAGAAAATATGCCGTCTGAT CGAGCAGCCAAACCAGGAGATGTTTTTACTGCACTCAATGGAAAGACCGT CGAGGTTGGTTCTATTTTACTATCCGAGGACGCTGGTTAGAAAGATATTC GTGTTATGAGCTTTTGTACCATATCTTGTACATATCCATTCTTTCAAAGA TGTCAAATAAATGGGCCccttgtgttttttgtttgctgtttttttttact ctcGCAGCAGAACCCCTTATAACATTGATAAATTTCTGAAAACATTTTTA TCTGTCAAAAAAATCcattattttgctccaaaatcTGATAATGACTGTTC GGATAATAATCCCCCTCGCCTTGTAATCAGCATCTCCCCATTCAGCAAAT TTCAAACTCCCTTTGAACATTAATCGATCTCGCCCTGACAAACGACAAGT CGAAAATCTCCCACGAAACCGTAATTTTCCCTTATCACTAAGTGATCATG ATATGATTGGAGTTGTTCGGAAACGTAACCATCAAAGATATGAACCCAAA ACCATCAAATGCCGAAACTTTTCGCGGTACAATCCTGATGCTATGAACAA CGAACTTCGCCAAGTCGATTGGAATCTTGTATATCAACAGTCCGAACCAA ATGCTGCTTGGAAATACTTCAAACAAATCGTGACTAACTCCTTCAATCGC CATGCCCCTGAAATAACAAAACGCATCAAAGGTCGCCCATGTCCATGGCT CACCCAAGAAATCCGAGCACACCTGAACGATCGTGACAAAGCTGATCGAA AAGCAAGGCGAACGAAAGACGAAGGTGATCGAAATATCTATCGTCGTAAA AAGAACCGATGCACCAATCTCATCAAACAGGCGAAAAACAATTACCATAA AGAAATCCTCACCGAAAACCtcaaaaatagtaaaaagtTCTGGGGTcaca tcaaaaaacttttaccaTCTTCAAACGTAAAATCAAAACCAACTGACGTT CTCAAAGACGGTGACGCAACCGCTACTAGCCCAAAAGACAAAGCCGATAT GTTTTGTAATTATTACGCCAAAGTGGCACagaatctaaagaaaaaagcaA TGCCACTAATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTTGGATCTA GTGAGGCTTTGGTTTTCACTCTCGTTGCTACATTTAACTATATCCCTAAT ATTCTGTATCAATTTGTTTACAACACCACAACACTACGCAATGATCTTTT ACCAGAGATAGTAAAGATAGGCGTTTAGGATATTTTATCTAATATTTATT TccgtcttattttttttttttttttaaacattttgaatatGATAATTTCA CTGTTTTTGGGTACTTTCTCCTTTTCAGAGTTTACACATTGCGTCACACT TTTCAGTATTAATATTCTCAGTATTACTGTATTAATAGACTTCACATGTA TACTCTTAGTCTTGTTTACATTAATTTTAAGATAACCTTTTGAAGTATCT ATCGATCACAGCGTGGTTTTTCTGCGGGTATAACCTTTCATATTTAGTTN GATGTCAAATAAATGGGCCccttgtgttttttgtttgctgttttttttta ctctcGCAGCAGAACCCCTTATAACATTGATAAATTTCTGAAAACACTTT TATCTGTCAAAAAAATCcattattttgctccaaaatcTGATAATGACTGT TCCGATAATAATCCCCCTCGCCTTGTAATCAGCATCTCCCCATTCAGCAA ATTTCAAACTCCCTTTCCGCTGTTTCTCAGGAACTTTGGagtaataatca aataaaaaatggcaaaaaaagagTCCATAAAAATTGTGTCATTGTGTTTA GGTCGATAACACAGATGCTGAAGGACGAATGATCCTGGCGGACGCTTTAT GCTACGCGGACGAATTTCAACCGTCTACAATAATCGATGTCGCTACACTT ACAGGTAAGGGGAGGTAAAATTATTTGACCCTTGGGATCTTCGCAACCAT CACTTAACCCAACTTAGATATTCTTGATAAGATTGGTCTCTAAAGCGTTT TCATTTTTGCTGTCCTTTTTGCTGTCCTTTTTTGCTTCATTTACAGTTTG TACAACTGAAAAACTTGATATTACTGCGTTGGATAAAACTGCCACCTTTC ATCTTCAGGTGCAATCGACGTGGCGTTAGGTGGGGCAGCCGCTGGAGCTT ACACAACGTGTAACAACTTATGGCAGAACATGGAACAGGTAACATCCGAT TCCTGAAATTGATTTATATAAAAActtcctttttttgtttttcgaagCTT TTCTTCGAAACAGGTTTGAGTAGGTTTTCATCAAAATACTTGGCTTTCTT TCCAGGCCAGTTACACGACAGGCGATCGTTTTTGGAGAATGCCTTTGTAC AAACATTACACCAAACAAATGAAATGTAGCTTGACTGCTGATCTACGAAA CACGCAGAAAAAAGCACGGTACGATACCTGAGGGATTTTTTTCTCAGACT TCTTCTTTGGGAAGCTGTTTTTTACTTAACCAAAAGTCAATAATTAAGAA GCTTCGTGAATGAGATTTGTTCAAGTATTGATTGCTTAACAGTTCTTTAA GACATAGCTTTCTTTATTTATACCACTCAATTtaattggacctaccccgg tggggtggaggtcctataaattcacctctgtccgttcgtccgtccgtctg ttcgttaccaacttttctcgagattggctcattagttttttctgattttt tgcacaaagatgcataactataaaccctcgaatgtgacggagcccgattt tcggggaaaaaattttttgggcaaatttgggccaaaaaacagctaaaaaa cgggttttttgaactttgtaaaaaattggatcattaattttttctgattt tttgcatgaaagtaccatcataggtaaaagatggcttaagcagatttttg ccaaaaaattttgttggctcaaaaaacgcatgtttatctataagaatcac tattactaagcatacatcaatgttcttagtcaaattactcaattttttta tgacatagatgttttttttgctcgcgagggcttacttttaaagaatatgt gtgtttagacatgaaattttggttgcttggcgtgtttttatagaaaaact ggccaaattcgatatttttttataagcacNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNccttatcaattacttaggtattagcttttctcgagattggc tctttcattctttatgattttttgcacaaagatgcataactacaaaccct caaatgtgacagagctcgatttacgaaaaaaaacatttttgggcaaattt gggccaaaaaacggccaaaaaacgggttttttggactttgtgaaaaattg gatcattaattttttctgattttttacatgaaagtagggtaccatcatag gtaaaagATGGCTCAAGCAGATTTTTGCAAAAAAAATTAGTTGGCTCAAT aaacgcatatttatctataaaaatcactattaataagcatacatcaatgt tcttagtcaaattactgaattttttttgtgagatagatattttttttact cgtgagggcttacttttaaagaatatgtgtgtttggacataaaattttgg ttgcttggcgtttttttatagaaaaactggccaaattcgatattttttta taagcacattatcaattacttaggtattagctcttttcgagattggctct ttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTcgttcttta tgattttttgcacaaagatgcataactataaaccctcaaatgtgacggag ctcgatttttggaagaaaaaaaaattgggtaagtttcagctaaaaaacgg ctaaaaaaaggttttttggatttgtgaaatattgaatcattgtttttttc tgattttttgcatgaaagtaggtaaaagatggctcaagcagatttttgta aaaaaataatttttcagctcaaaaaacgcatctttatctataagaatcag tattaataagcatacatcaatgttcttagccaaattactgaattttttga tgagatatgttttttttgctcacgaagtcttgaatataaaagaatatttt aagagcatgaaattttggtttctaaatgttttttttataagaaataaacg actaattttaatatatcgtgactatttgtgttctgaatgattgtttaatg gtcacgctcacgtagttTTCagttatatatgtgttaaatgcataaccagg taggtccataaaagtatcacttgttattttattttttccataGTTCCGCT GGGTCCGCAACTGCTGCCGCTTTTTTAAAGGTAAGAGTAGTAATTCGAAT CAAAAACTTCCATAAAATGGAAAGTTTATATTTACACTGTTAAAGACTTC Tttaagcgtacaaactttcgcgggcagattcttttgtgattttcgcgaat tttagcccttttcgcgaaagtaaatgtctttgaaaattcttgaaagaGCC ATTCGCATCCATtcagtttatgctcgcgaaaaaaatTCCTGAcaagataa gaaaaaaatcagtaatGCTTCTaaattaaagtaaaattaagaataattct atttatactgagacgattaattagtctgagacgagcaatttagaaaTTGA GAattatggaggagtgtactttcGATTCATatttcaataaataggatctc ctccacagatcacattttacaaactattcgtctcagacgatttttccgtc tcGGTATAAATAGAACTATTTATGGCACCTTTCTGCCCGTTAAAGCCTCA CGAGTCAAAAAACAAAAGCTTCAATCCgattcaagaagtatttgtccttC TAAGCCATTTCTTCGTGTGAAAATTGTTTGCGATTTGTTTATGTTGTTCG TGAAAGTTTTTTagggaaaaaatgtttttcgataCTCCCCTGTAGATTCA AAGCTTCCTAATCATATTTGATCCATATTTATTTGGATTGATAAcgtgtc taattttccgtcccTCAGGAATTTGTGACGATAAAAAGTTGGGCCCACCT CGACATGTCGAACGTCAAAGCGAACTCGAGTGGCGAATTATCTTATCTCG GTCCAGGCTTTTCAGGTCAGTCTAACCTCATGTTTTTCTCTCATATTTTT GTAGGAATTTGTAACGATTAAGAGCTGGGCTCATCTAGATATTGCTGGCG TGATGGATAATTCCGGAGGGGAATTACCGTATCTCAACTCCGGAATGTCA GGTTTGTCTGCTTTCTTTTCCTGTTTTTCAAAATGCATGGACACGTAAAT TCTCTTTCCGCCTTCGTCAGCTCtgaaaagctcaatttttggacctacct ccgggtaccccggtggaggtcctttaaattaacccatgttcgtccgtccg tccgtccgttcgtctgttaccagcttttctcgggattggcttattacttt tttctgtttttttggcacaatgatgcaaaatgatgattcctaaaaagtga cgggcaaatttgggctacaaactgcctaaaaatagggttttttggacttt gtgcaaaatcctgtcattacttttttcttattttttgtacaaagatggag ggcaaaattctctaaagaatgactgaagtggtttttcccggaaaattctt attcgccttaaaagacggattttcgtattttggggaaattccctttaacc aaataaggaaatatagcttttctcaatgttgactcataatgtttttctga ttttttgcacaatgatgcaaaatggcaatgcccaaaatgtgacggagcca gatttttaaggaaaatttttttgggcaaatttggggaaaaaactgcttaa aaatagggttttttgggcctgaatggtttaagtgattttcgtatttgggg aaattcctttttaccattttacattattcaacacacNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaggtagg tccattcagcatgttgcttgtttggtttgattttttggaaCTCTTTTGTT AGGGGGAGGCATTTGAGATCTGatattgattttcttattttcttaggTCG TCCGACAAGAACTTTGGTTGAAACCGTCCGAAATATTTTTACGtagaaaa aagaaacattatttttatttgacaaGTTTTTATAGTTTAGATCACACATA actttagaatttatttttgtatttttgatggAAACATTTACCAATtacaa aaaactcattttttcaatgcaacGATTTCATCCAAGCCATACGCCCCTCT TTTATAATTGAGATAATTCTCAAGCtgcttcaaatttttttgtaaaaccc ATACTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004580XLOC_004580Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008124-exon-sc0000082-1491911889:456979..457195TCONS_00008124-exon-sc0000082-1491911889:456979..457195Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1510915933:456979..457195TCONS_00008124-exon-sc0000082-1510915933:456979..457195Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1575043694:456979..457195TCONS_00008124-exon-sc0000082-1575043694:456979..457195Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1491911889:463130..463232TCONS_00008124-exon-sc0000082-1491911889:463130..463232Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1510915933:463130..463232TCONS_00008124-exon-sc0000082-1510915933:463130..463232Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1575043694:463130..463232TCONS_00008124-exon-sc0000082-1575043694:463130..463232Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1491911889:463437..463516TCONS_00008124-exon-sc0000082-1491911889:463437..463516Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1510915933:463437..463516TCONS_00008124-exon-sc0000082-1510915933:463437..463516Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1575043694:463437..463516TCONS_00008124-exon-sc0000082-1575043694:463437..463516Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1491911889:463634..463746TCONS_00008124-exon-sc0000082-1491911889:463634..463746Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1510915933:463634..463746TCONS_00008124-exon-sc0000082-1510915933:463634..463746Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1575043694:463634..463746TCONS_00008124-exon-sc0000082-1575043694:463634..463746Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1491911889:465772..465808TCONS_00008124-exon-sc0000082-1491911889:465772..465808Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1510915933:465772..465808TCONS_00008124-exon-sc0000082-1510915933:465772..465808Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1575043694:465772..465808TCONS_00008124-exon-sc0000082-1575043694:465772..465808Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1491911889:466497..466593TCONS_00008124-exon-sc0000082-1491911889:466497..466593Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1510915933:466497..466593TCONS_00008124-exon-sc0000082-1510915933:466497..466593Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1575043694:466497..466593TCONS_00008124-exon-sc0000082-1575043694:466497..466593Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1491911889:467725..467986TCONS_00008124-exon-sc0000082-1491911889:467725..467986Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1510915933:467725..467986TCONS_00008124-exon-sc0000082-1510915933:467725..467986Clytia hemisphaericaexon
TCONS_00008124-exon-sc0000082-1575043694:467725..467986TCONS_00008124-exon-sc0000082-1575043694:467725..467986Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082supercontigsc0000082:456979..467986 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.96046 3.70115 0.0515147 4.6995 2.58506 0.0508624 1.82602 0.130903 4.06243 4.06585 4.55146 1.77755 0.126789 0.0349128 7.52052 5.6421 9.81852 5.16296 0.0520924 0.0342975 0.0802195 4.29452 0.212052 4.76023 4.81581 3.67201 0.0716143 4.23998 0.150061 4.87079
Blast
BLAST of TCONS_00008124 vs. Swiss-Prot (Human)
Match: AMPL (Cytosol aminopeptidase OS=Homo sapiens GN=LAP3 PE=1 SV=3)

HSP 1 Score: 224.557 bits (571), Expect = 2.012e-68
Identity = 132/224 (58.93%), Postives = 161/224 (71.88%), Query Frame = 2
Query:    2 SGGISIKPSSGMGLMRGDMGGAACVLATLHIIAKLKLPVNLSVLVPMAENMPSDRAAKPGDVFTALNGKTVEVDNTDAEGRMILADALCYADEFQPSTIIDVATLTXXXXXXXXXXXXXXYTTCNNLWQNMEQASYTTGDRFWRMPLYKHYTKQMKCSLTADLRNTQKKXXXXXXXXXXXFLKEFVTIKSWAHLDMSNVKANSSGELSYLGPGFSGRPTRTLVE 673
            SGGISIK S+ M LMR DMGGAA + + +   AKL LP+N+  L P+ ENMPS +A KPGDV  A NGKT++VDNTDAEGR+ILADALCYA  F P  I++ ATLTGA+DVALG  A G +T  + LW  + +AS  TGDR WRMPL++HYT+Q+     AD+ N   K RSAG+ TAAAFLKEFVT   WAHLD++ V  N   E+ YL  G +GRPTRTL+E
Sbjct:  288 SGGISIKASANMDLMRADMGGAATICSAIVSAAKLNLPINIIGLAPLCENMPSGKANKPGDVVRAKNGKTIQVDNTDAEGRLILADALCYAHTFNPKVILNAATLTGAMDVALGSGATGVFTNSSWLWNKLFEASIETGDRVWRMPLFEHYTRQVVDCQLADVNNI-GKYRSAGACTAAAFLKEFVTHPKWAHLDIAGVMTNKD-EVPYLRKGMTGRPTRTLIE 509          
The following BLAST results are available for this feature:
BLAST of TCONS_00008124 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AMPL2.012e-6858.93Cytosol aminopeptidase OS=Homo sapiens GN=LAP3 PE=... [more]
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