TCONS_00008095 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008095
Unique NameTCONS_00008095
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length363

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008095 ID=TCONS_00008095|Name=TCONS_00008095|organism=Clytia hemisphaerica|type=transcript|length=363bp
AATCGAAAACAATGACGACAATGATGAAATAATGCAAAAAAATCTCaaca
atttcaaatcaaaattatttgaagAAAATCGGTATTTTCGGAACAAAAAT
TACGATGACGTTATCACTGTCAAAGATTCAATACTGGggataaagttttt
gaaaaggaaaatattgaaAGCATTATATGATAACGATGATGGTGAAAATG
AATCTGTtcgaaaaaatgatgaaaaaaacgACAGTGGAAACTATGGAACA
AGAAGTGCTTTTTCTGAGAAAAACTAGAAAGCttttatattcaaaacaaa
actatTTAAGTTCAAAGACCgtgcaacggattagaataggtggattaaga
actcatagaaaac
Run BLAST on NCBI

transcript from alignment at sc0000081:611497..611859

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008095 ID=TCONS_00008095|Name=TCONS_00008095|organism=Clytia hemisphaerica|type=transcript|length=363bp|location=Sequence derived from alignment at sc0000081:611497..611859 (Clytia hemisphaerica)
gttttctatgagttcttaatccacctattctaatccgttgcacGGTCTTT
GAACTTAAatagttttgttttgaatataaaaGCTTTCTAGTTTTTCTCAG
AAAAAGCACTTCTTGTTCCATAGTTTCCACTGTcgtttttttcatcattt
tttcgaACAGATTCATTTTCACCATCATCGTTATCATATAATGCTttcaa
tattttccttttcaaaaactttatccCCAGTATTGAATCTTTGACAGTGA
TAACGTCATCGTAATTTTTGTTCCGAAAATACCGATTTTcttcaaataat
tttgatttgaaattgttGAGATTTTTTTGCATTATTTCATCATTGTCGTC
ATTGTTTTCGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004565XLOC_004565Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008095-exon-sc0000081-1491911889:611497..611859TCONS_00008095-exon-sc0000081-1491911889:611497..611859Clytia hemisphaericaexon
TCONS_00008095-exon-sc0000081-1510915933:611497..611859TCONS_00008095-exon-sc0000081-1510915933:611497..611859Clytia hemisphaericaexon
TCONS_00008095-exon-sc0000081-1575043694:611497..611859TCONS_00008095-exon-sc0000081-1575043694:611497..611859Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000081supercontigsc0000081:611497..611859 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.5726	1.35542	1.18437	0.695518	4.67166	4.53613	4.84049	4.20688	0.239803	0.290123	1.12693	0.914576	1.23639	1.38675	0.427003	0.447046	0.958611	1.48881	0	0.747873	8.07803	6.96516	1.75285	4.4432	2.04486	2.94266	1.32344	0.702796	1.61535	1.09956
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008095 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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